Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.42□□□□□ -1.7
PDZRN3Q9UPQ7 FAM35CP-201ENST00000554755 2470 ntBASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 RNU6-1104P-201ENST00000384723 104 ntBASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 RNA5SP201-201ENST00000410316 124 ntBASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 AC023449.1-201ENST00000454464 154 ntBASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 RNU7-170P-201ENST00000459303 61 ntBASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 S100A11P2-201ENST00000467589 312 ntBASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 RPS26P55-201ENST00000471178 356 ntBASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 AIG1P1-201ENST00000503376 148 ntBASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 AC114801.3-201ENST00000510231 177 ntBASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 AC027176.1-201ENST00000560204 514 ntBASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 AC009163.5-201ENST00000575421 637 ntBASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 MIR4662B-201ENST00000579498 81 ntBASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 MIR4668-201ENST00000582284 70 ntBASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 AC091152.3-201ENST00000604227 325 ntBASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 U6.98-201ENST00000637157 84 ntBASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
PDZRN3Q9UPQ7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.4□□□□□ -1.7
PDZRN3Q9UPQ7 AC091152.2-201ENST00000591628 2569 ntBASIC4.4□□□□□ -1.7
PDZRN3Q9UPQ7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PDZRN3Q9UPQ7 Y_RNA.4-201ENST00000362333 112 ntBASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 SNORA18.2-201ENST00000383865 132 ntBASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 Y_RNA.510-201ENST00000384511 114 ntBASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 MIR562-201ENST00000384894 95 ntBASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 Y_RNA.611-201ENST00000410682 108 ntBASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 AL159169.1-201ENST00000421119 127 ntBASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 AC099548.1-201ENST00000421443 426 ntBASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 RPL27AP5-201ENST00000469428 449 ntBASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 AC107626.1-201ENST00000471084 183 ntBASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 RNU6-126P-201ENST00000516685 103 ntBASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 AC109329.2-201ENST00000519658 482 ntBASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 AC011602.1-201ENST00000546484 331 ntBASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 MIR6852-201ENST00000621699 66 ntBASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 Z83843.1-201ENST00000604070 3685 ntBASIC4.4□□□□□ -1.71
PDZRN3Q9UPQ7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.39□□□□□ -1.71
PDZRN3Q9UPQ7 Y_RNA.316-201ENST00000365118 111 ntBASIC4.39□□□□□ -1.71
PDZRN3Q9UPQ7 RNU6-629P-201ENST00000384061 103 ntBASIC4.39□□□□□ -1.71
PDZRN3Q9UPQ7 RNY1P6-201ENST00000384193 109 ntBASIC4.39□□□□□ -1.71
PDZRN3Q9UPQ7 MIR1289-1-201ENST00000408836 144 ntBASIC4.39□□□□□ -1.71
PDZRN3Q9UPQ7 RNU2-11P-201ENST00000459191 187 ntBASIC4.39□□□□□ -1.71
PDZRN3Q9UPQ7 RNU6-1006P-201ENST00000516998 103 ntBASIC4.39□□□□□ -1.71
PDZRN3Q9UPQ7 SNORA31.20-201ENST00000517111 133 ntBASIC4.39□□□□□ -1.71
PDZRN3Q9UPQ7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.39□□□□□ -1.71
PDZRN3Q9UPQ7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.39□□□□□ -1.71
PDZRN3Q9UPQ7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.39□□□□□ -1.71
PDZRN3Q9UPQ7 U4.6-201ENST00000621618 127 ntBASIC4.39□□□□□ -1.71
PDZRN3Q9UPQ7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PDZRN3Q9UPQ7 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
PDZRN3Q9UPQ7 TNPO1P3-201ENST00000436471 2662 ntBASIC4.39□□□□□ -1.71
PDZRN3Q9UPQ7 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 SNORA27.1-201ENST00000362604 124 ntBASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 Y_RNA.203-201ENST00000364106 102 ntBASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 Y_RNA.298-201ENST00000364960 107 ntBASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 RNU6-140P-201ENST00000384566 108 ntBASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 AC245291.1-201ENST00000419501 328 ntBASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 AC010285.1-201ENST00000470580 392 ntBASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 RN7SL594P-201ENST00000470590 287 ntBASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 OR9P1P-201ENST00000496431 281 ntBASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 MLLT10P2-201ENST00000506434 249 ntBASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 AC096725.1-201ENST00000514266 313 ntBASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 RNU6-63P-201ENST00000516690 95 ntBASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 SUMO2P16-201ENST00000519475 264 ntBASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 MIR4777-201ENST00000583710 86 ntBASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 AC093908.1-201ENST00000623125 8092 ntBASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PDZRN3Q9UPQ7 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 RNU6-50P-201ENST00000362356 103 ntBASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 Y_RNA.796-201ENST00000364268 102 ntBASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 Y_RNA.799-201ENST00000364992 102 ntBASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 RNU6-409P-201ENST00000384114 104 ntBASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 MIR1185-2-201ENST00000408687 86 ntBASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 MRPL35P3-201ENST00000421557 364 ntBASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 AL357552.1-201ENST00000445254 415 ntBASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 HMGN2P16-201ENST00000456802 261 ntBASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 Y_RNA.659-201ENST00000515994 113 ntBASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 RNU2-44P-201ENST00000516795 194 ntBASIC4.37□□□□□ -1.71
PDZRN3Q9UPQ7 IGKV2-26-201ENST00000518305 343 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms