Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.88□□□□□ -1.79
NXF1Q9UBU9 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NXF1Q9UBU9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NXF1Q9UBU9 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NXF1Q9UBU9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NXF1Q9UBU9 AC091564.4-201ENST00000533934 2194 ntBASIC3.87□□□□□ -1.79
NXF1Q9UBU9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
NXF1Q9UBU9 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NXF1Q9UBU9 Y_RNA.467-201ENST00000384297 102 ntBASIC3.87□□□□□ -1.79
NXF1Q9UBU9 RNU6-616P-201ENST00000384353 107 ntBASIC3.87□□□□□ -1.79
NXF1Q9UBU9 MIR605-201ENST00000385078 83 ntBASIC3.87□□□□□ -1.79
NXF1Q9UBU9 Z98941.1-201ENST00000407764 100 ntBASIC3.87□□□□□ -1.79
NXF1Q9UBU9 RBMY2UP-201ENST00000453474 324 ntBASIC3.87□□□□□ -1.79
NXF1Q9UBU9 RPS3P1-201ENST00000456781 192 ntBASIC3.87□□□□□ -1.79
NXF1Q9UBU9 snoU13.4-201ENST00000458916 104 ntBASIC3.87□□□□□ -1.79
NXF1Q9UBU9 snoU13.14-201ENST00000459372 104 ntBASIC3.87□□□□□ -1.79
NXF1Q9UBU9 RN7SL93P-201ENST00000463035 293 ntBASIC3.87□□□□□ -1.79
NXF1Q9UBU9 MIR3618-201ENST00000580330 88 ntBASIC3.87□□□□□ -1.79
NXF1Q9UBU9 MIR4712-201ENST00000583750 82 ntBASIC3.87□□□□□ -1.79
NXF1Q9UBU9 AC073413.2-201ENST00000604332 360 ntBASIC3.87□□□□□ -1.79
NXF1Q9UBU9 AC087741.2-201ENST00000619415 172 ntBASIC3.87□□□□□ -1.79
NXF1Q9UBU9 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.87□□□□□ -1.79
NXF1Q9UBU9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NXF1Q9UBU9 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NXF1Q9UBU9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.86□□□□□ -1.79
NXF1Q9UBU9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NXF1Q9UBU9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NXF1Q9UBU9 RNU1-18P-201ENST00000363062 164 ntBASIC3.86□□□□□ -1.79
NXF1Q9UBU9 DBIP2-201ENST00000419076 262 ntBASIC3.86□□□□□ -1.79
NXF1Q9UBU9 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.86□□□□□ -1.79
NXF1Q9UBU9 RNU2-35P-201ENST00000516446 142 ntBASIC3.86□□□□□ -1.79
NXF1Q9UBU9 RN7SKP282-201ENST00000516824 299 ntBASIC3.86□□□□□ -1.79
NXF1Q9UBU9 RNU7-172P-201ENST00000517125 64 ntBASIC3.86□□□□□ -1.79
NXF1Q9UBU9 AC011602.1-201ENST00000546484 331 ntBASIC3.86□□□□□ -1.79
NXF1Q9UBU9 AC004486.1-201ENST00000546846 233 ntBASIC3.86□□□□□ -1.79
NXF1Q9UBU9 MIR3117-201ENST00000584034 78 ntBASIC3.86□□□□□ -1.79
NXF1Q9UBU9 SNRPGP15-201ENST00000600149 222 ntBASIC3.86□□□□□ -1.79
NXF1Q9UBU9 AC110741.2-201ENST00000605278 268 ntBASIC3.86□□□□□ -1.79
NXF1Q9UBU9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.86□□□□□ -1.79
NXF1Q9UBU9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.86□□□□□ -1.79
NXF1Q9UBU9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.86□□□□□ -1.79
NXF1Q9UBU9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NXF1Q9UBU9 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NXF1Q9UBU9 AC004944.1-201ENST00000517807 3059 ntBASIC3.85□□□□□ -1.79
NXF1Q9UBU9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.85□□□□□ -1.79
NXF1Q9UBU9 RNU6-363P-201ENST00000362895 105 ntBASIC3.85□□□□□ -1.79
NXF1Q9UBU9 Y_RNA.95-201ENST00000363079 95 ntBASIC3.85□□□□□ -1.79
NXF1Q9UBU9 SNORD45B-201ENST00000364617 72 ntBASIC3.85□□□□□ -1.79
NXF1Q9UBU9 SNORA2.2-201ENST00000365473 135 ntBASIC3.85□□□□□ -1.79
NXF1Q9UBU9 Y_RNA.500-201ENST00000384466 111 ntBASIC3.85□□□□□ -1.79
NXF1Q9UBU9 MIR518F-201ENST00000384973 87 ntBASIC3.85□□□□□ -1.79
NXF1Q9UBU9 RNU6-221P-201ENST00000459541 99 ntBASIC3.85□□□□□ -1.79
NXF1Q9UBU9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.85□□□□□ -1.79
NXF1Q9UBU9 MIR4305-201ENST00000583252 102 ntBASIC3.85□□□□□ -1.79
NXF1Q9UBU9 Y_RNA.773-201ENST00000607168 90 ntBASIC3.85□□□□□ -1.79
NXF1Q9UBU9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
NXF1Q9UBU9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NXF1Q9UBU9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NXF1Q9UBU9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.84□□□□□ -1.79
NXF1Q9UBU9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
NXF1Q9UBU9 AC093908.1-201ENST00000623125 8092 ntBASIC3.84□□□□□ -1.79
NXF1Q9UBU9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NXF1Q9UBU9 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
NXF1Q9UBU9 Y_RNA.545-201ENST00000384652 105 ntBASIC3.84□□□□□ -1.79
NXF1Q9UBU9 SNORA1.3-201ENST00000384676 136 ntBASIC3.84□□□□□ -1.79
NXF1Q9UBU9 AC106707.2-201ENST00000484182 374 ntBASIC3.84□□□□□ -1.79
NXF1Q9UBU9 RNU6-1098P-201ENST00000516772 96 ntBASIC3.84□□□□□ -1.79
NXF1Q9UBU9 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.84□□□□□ -1.79
NXF1Q9UBU9 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.84□□□□□ -1.79
NXF1Q9UBU9 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.84□□□□□ -1.79
NXF1Q9UBU9 RPS15AP11-201ENST00000594193 385 ntBASIC3.84□□□□□ -1.79
NXF1Q9UBU9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.84□□□□□ -1.79
NXF1Q9UBU9 U4.6-201ENST00000621618 127 ntBASIC3.84□□□□□ -1.79
NXF1Q9UBU9 AC244205.2-202ENST00000635781 342 ntBASIC3.84□□□□□ -1.79
NXF1Q9UBU9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
NXF1Q9UBU9 AC000403.1-201ENST00000613696 3585 ntBASIC3.84□□□□□ -1.8
NXF1Q9UBU9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
NXF1Q9UBU9 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
NXF1Q9UBU9 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
NXF1Q9UBU9 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.83□□□□□ -1.8
NXF1Q9UBU9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
NXF1Q9UBU9 RNU6-335P-201ENST00000364563 113 ntBASIC3.83□□□□□ -1.8
NXF1Q9UBU9 MIR493-201ENST00000385254 89 ntBASIC3.83□□□□□ -1.8
NXF1Q9UBU9 AC009414.1-201ENST00000427200 443 ntBASIC3.83□□□□□ -1.8
NXF1Q9UBU9 HMGN2P31-201ENST00000432430 273 ntBASIC3.83□□□□□ -1.8
NXF1Q9UBU9 AL353813.1-201ENST00000440700 253 ntBASIC3.83□□□□□ -1.8
NXF1Q9UBU9 SNRPGP13-201ENST00000442212 177 ntBASIC3.83□□□□□ -1.8
NXF1Q9UBU9 SNORD105B-201ENST00000458770 79 ntBASIC3.83□□□□□ -1.8
NXF1Q9UBU9 AC004223.1-201ENST00000479840 271 ntBASIC3.83□□□□□ -1.8
NXF1Q9UBU9 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.83□□□□□ -1.8
NXF1Q9UBU9 MIR3922-201ENST00000585192 84 ntBASIC3.83□□□□□ -1.8
NXF1Q9UBU9 uc_338.32-201ENST00000615087 172 ntBASIC3.83□□□□□ -1.8
NXF1Q9UBU9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NXF1Q9UBU9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NXF1Q9UBU9 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NXF1Q9UBU9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NXF1Q9UBU9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NXF1Q9UBU9 RNU4-67P-201ENST00000364569 141 ntBASIC3.82□□□□□ -1.8
NXF1Q9UBU9 MIR124-3-201ENST00000384866 87 ntBASIC3.82□□□□□ -1.8
NXF1Q9UBU9 RNU6-57P-201ENST00000411348 103 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms