Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.56□□□□□ -2
LRIT1Q9P2V4 AC108706.1-201ENST00000611053 297 ntBASIC2.56□□□□□ -2
LRIT1Q9P2V4 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.56□□□□□ -2
LRIT1Q9P2V4 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.56□□□□□ -2
LRIT1Q9P2V4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.56□□□□□ -2
LRIT1Q9P2V4 Y_RNA.272-201ENST00000364696 102 ntBASIC2.55□□□□□ -2
LRIT1Q9P2V4 SNORD113-1-201ENST00000365321 69 ntBASIC2.55□□□□□ -2
LRIT1Q9P2V4 Y_RNA.368-201ENST00000365547 113 ntBASIC2.55□□□□□ -2
LRIT1Q9P2V4 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LRIT1Q9P2V4 MIR1185-2-201ENST00000408687 86 ntBASIC2.55□□□□□ -2
LRIT1Q9P2V4 RNU6-855P-201ENST00000410395 104 ntBASIC2.55□□□□□ -2
LRIT1Q9P2V4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.55□□□□□ -2
LRIT1Q9P2V4 AC090515.1-201ENST00000465295 476 ntBASIC2.55□□□□□ -2
LRIT1Q9P2V4 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.55□□□□□ -2
LRIT1Q9P2V4 RNU5F-4P-201ENST00000516581 114 ntBASIC2.55□□□□□ -2
LRIT1Q9P2V4 AC021269.2-201ENST00000532318 330 ntBASIC2.55□□□□□ -2
LRIT1Q9P2V4 MIR4635-201ENST00000583759 79 ntBASIC2.55□□□□□ -2
LRIT1Q9P2V4 AL670379.2-201ENST00000604983 252 ntBASIC2.55□□□□□ -2
LRIT1Q9P2V4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.55□□□□□ -2
LRIT1Q9P2V4 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LRIT1Q9P2V4 AC132825.6-201ENST00000638861 357 ntBASIC2.55□□□□□ -2
LRIT1Q9P2V4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.55□□□□□ -2
LRIT1Q9P2V4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
LRIT1Q9P2V4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.54□□□□□ -2
LRIT1Q9P2V4 AL355596.1-201ENST00000565399 3996 ntBASIC2.54□□□□□ -2
LRIT1Q9P2V4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
LRIT1Q9P2V4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LRIT1Q9P2V4 Y_RNA.182-201ENST00000363880 111 ntBASIC2.54□□□□□ -2
LRIT1Q9P2V4 SNORD116-18-201ENST00000383961 92 ntBASIC2.54□□□□□ -2
LRIT1Q9P2V4 SNORD14D-201ENST00000384390 87 ntBASIC2.54□□□□□ -2
LRIT1Q9P2V4 MIR29B2-201ENST00000385055 81 ntBASIC2.54□□□□□ -2
LRIT1Q9P2V4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.54□□□□□ -2
LRIT1Q9P2V4 MIR1283-1-201ENST00000408494 87 ntBASIC2.54□□□□□ -2
LRIT1Q9P2V4 AL606753.1-201ENST00000427435 87 ntBASIC2.54□□□□□ -2
LRIT1Q9P2V4 SEPT7P4-201ENST00000437076 306 ntBASIC2.54□□□□□ -2
LRIT1Q9P2V4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.54□□□□□ -2
LRIT1Q9P2V4 AC016717.1-201ENST00000448918 286 ntBASIC2.54□□□□□ -2
LRIT1Q9P2V4 RNU7-14P-201ENST00000459331 62 ntBASIC2.54□□□□□ -2
LRIT1Q9P2V4 SCARNA8-201ENST00000515924 131 ntBASIC2.54□□□□□ -2
LRIT1Q9P2V4 RNU6-453P-201ENST00000516819 85 ntBASIC2.54□□□□□ -2
LRIT1Q9P2V4 MIR4658-201ENST00000584344 65 ntBASIC2.54□□□□□ -2
LRIT1Q9P2V4 AC025754.2-201ENST00000606491 432 ntBASIC2.54□□□□□ -2
LRIT1Q9P2V4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.54□□□□□ -2
LRIT1Q9P2V4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.54□□□□□ -2
LRIT1Q9P2V4 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.54□□□□□ -2
LRIT1Q9P2V4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
LRIT1Q9P2V4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.53□□□□□ -2
LRIT1Q9P2V4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.53□□□□□ -2
LRIT1Q9P2V4 Y_RNA.75-201ENST00000362927 97 ntBASIC2.53□□□□□ -2
LRIT1Q9P2V4 SNORA38-201ENST00000363946 132 ntBASIC2.53□□□□□ -2
LRIT1Q9P2V4 RNU6-704P-201ENST00000364162 103 ntBASIC2.53□□□□□ -2
LRIT1Q9P2V4 RNA5SP125-201ENST00000364843 120 ntBASIC2.53□□□□□ -2
LRIT1Q9P2V4 Y_RNA.287-201ENST00000364853 94 ntBASIC2.53□□□□□ -2
LRIT1Q9P2V4 RNU6-234P-201ENST00000365229 104 ntBASIC2.53□□□□□ -2
LRIT1Q9P2V4 Y_RNA.341-201ENST00000365341 102 ntBASIC2.53□□□□□ -2
LRIT1Q9P2V4 RNA5SP240-201ENST00000365355 128 ntBASIC2.53□□□□□ -2
LRIT1Q9P2V4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.53□□□□□ -2
LRIT1Q9P2V4 RNU7-141P-201ENST00000459304 62 ntBASIC2.53□□□□□ -2
LRIT1Q9P2V4 RNA5SP76-201ENST00000516277 87 ntBASIC2.53□□□□□ -2
LRIT1Q9P2V4 RNA5SP282-201ENST00000516355 108 ntBASIC2.53□□□□□ -2
LRIT1Q9P2V4 AC004832.4-201ENST00000608952 331 ntBASIC2.53□□□□□ -2
LRIT1Q9P2V4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2.01
LRIT1Q9P2V4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 SNORD116-13-201ENST00000384408 92 ntBASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 MIR626-201ENST00000385032 94 ntBASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 MIR613-201ENST00000385248 95 ntBASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 Y_RNA.580-201ENST00000391004 95 ntBASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 AL590004.2-201ENST00000404787 371 ntBASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 AC003685.2-201ENST00000422795 395 ntBASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 TMSB4XP3-201ENST00000445144 114 ntBASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 RPS27AP9-201ENST00000477681 438 ntBASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 TRBV12-1-201ENST00000479785 344 ntBASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 AC008413.1-201ENST00000511864 177 ntBASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
LRIT1Q9P2V4 RNU4-84P-201ENST00000364200 139 ntBASIC2.51□□□□□ -2.01
LRIT1Q9P2V4 Y_RNA.293-201ENST00000364908 93 ntBASIC2.51□□□□□ -2.01
LRIT1Q9P2V4 SNORA20B-201ENST00000384220 132 ntBASIC2.51□□□□□ -2.01
LRIT1Q9P2V4 Y_RNA.456-201ENST00000384232 111 ntBASIC2.51□□□□□ -2.01
LRIT1Q9P2V4 MIR548I2-201ENST00000408348 149 ntBASIC2.51□□□□□ -2.01
LRIT1Q9P2V4 RNU2-63P-201ENST00000410792 194 ntBASIC2.51□□□□□ -2.01
LRIT1Q9P2V4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.51□□□□□ -2.01
LRIT1Q9P2V4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.51□□□□□ -2.01
LRIT1Q9P2V4 AL121890.1-201ENST00000435457 205 ntBASIC2.51□□□□□ -2.01
LRIT1Q9P2V4 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.51□□□□□ -2.01
LRIT1Q9P2V4 RNU7-57P-201ENST00000459540 60 ntBASIC2.51□□□□□ -2.01
LRIT1Q9P2V4 RN7SL499P-201ENST00000481141 276 ntBASIC2.51□□□□□ -2.01
LRIT1Q9P2V4 SRIP1-201ENST00000489235 288 ntBASIC2.51□□□□□ -2.01
LRIT1Q9P2V4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.51□□□□□ -2.01
LRIT1Q9P2V4 RNU6-965P-201ENST00000516721 96 ntBASIC2.51□□□□□ -2.01
LRIT1Q9P2V4 AC091544.4-201ENST00000555268 342 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 388.1 ms