Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 Y_RNA.101-201ENST00000363154 102 ntBASIC1.95□□□□□ -2.1
HCN3Q9P1Z3 RNU4-76P-201ENST00000364509 141 ntBASIC1.95□□□□□ -2.1
HCN3Q9P1Z3 RNU6-1227P-201ENST00000383981 107 ntBASIC1.95□□□□□ -2.1
HCN3Q9P1Z3 MIR515-2-201ENST00000384883 83 ntBASIC1.95□□□□□ -2.1
HCN3Q9P1Z3 MIR515-1-201ENST00000384884 83 ntBASIC1.95□□□□□ -2.1
HCN3Q9P1Z3 MIR676-201ENST00000390702 67 ntBASIC1.95□□□□□ -2.1
HCN3Q9P1Z3 RNA5SP247-201ENST00000411181 105 ntBASIC1.95□□□□□ -2.1
HCN3Q9P1Z3 AL139156.1-201ENST00000412785 841 ntBASIC1.95□□□□□ -2.1
HCN3Q9P1Z3 HMGN2P19-201ENST00000425149 265 ntBASIC1.95□□□□□ -2.1
HCN3Q9P1Z3 AC010409.1-201ENST00000487382 476 ntBASIC1.95□□□□□ -2.1
HCN3Q9P1Z3 RNA5SP364-201ENST00000516938 78 ntBASIC1.95□□□□□ -2.1
HCN3Q9P1Z3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.95□□□□□ -2.1
HCN3Q9P1Z3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.95□□□□□ -2.1
HCN3Q9P1Z3 AC104695.3-201ENST00000604052 296 ntBASIC1.95□□□□□ -2.1
HCN3Q9P1Z3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.95□□□□□ -2.1
HCN3Q9P1Z3 AC010205.1-201ENST00000616668 449 ntBASIC1.95□□□□□ -2.1
HCN3Q9P1Z3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 Y_RNA.143-201ENST00000363520 106 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 RNU6-112P-201ENST00000363599 104 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 RNU6-324P-201ENST00000363957 106 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 MIR520A-201ENST00000384862 85 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 RNU6-823P-201ENST00000391042 103 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 RNU2-20P-201ENST00000410425 191 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 AC245047.4-201ENST00000433189 144 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 AC005002.2-201ENST00000438228 269 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 RPEP5-201ENST00000441137 268 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 AL163195.1-201ENST00000496941 348 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 RNU6-397P-201ENST00000516226 104 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 RNU6-155P-201ENST00000516347 100 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 SNORA31.17-201ENST00000516953 127 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 Y_RNA.721-201ENST00000517207 102 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 AC022616.4-201ENST00000522985 181 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 AC002984.1-201ENST00000591692 448 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 AL627230.6-201ENST00000611129 280 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 AC040896.1-201ENST00000613819 479 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 U6.73-201ENST00000619194 103 ntBASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
HCN3Q9P1Z3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 CENPCP1-201ENST00000533085 2578 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 RNA5SP99-201ENST00000364020 114 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 RNU6-694P-201ENST00000364071 147 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 Y_RNA.230-201ENST00000364348 109 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 RNU6-1175P-201ENST00000365200 107 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 AC117470.1-201ENST00000381974 330 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 RNA5SP338-201ENST00000410495 85 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 EBAG9P1-201ENST00000418955 543 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 MTCYBP6-201ENST00000441810 138 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 MRPS10P1-201ENST00000448483 130 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 RNA5SP233-201ENST00000459153 113 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 RNA5SP20-201ENST00000515976 84 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 RNU1-40P-201ENST00000516816 164 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 RNU1-97P-201ENST00000516872 164 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 Y_RNA.713-201ENST00000517013 96 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 Y_RNA.715-201ENST00000517082 110 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 MIR5002-201ENST00000584713 97 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 AL021879.1-201ENST00000611756 288 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 AC006435.5-201ENST00000624486 112 ntBASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
HCN3Q9P1Z3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HCN3Q9P1Z3 RNU6-271P-201ENST00000363858 105 ntBASIC1.92□□□□□ -2.1
HCN3Q9P1Z3 Y_RNA.446-201ENST00000384178 104 ntBASIC1.92□□□□□ -2.1
HCN3Q9P1Z3 RNU6-937P-201ENST00000384325 106 ntBASIC1.92□□□□□ -2.1
HCN3Q9P1Z3 Y_RNA.527-201ENST00000384573 102 ntBASIC1.92□□□□□ -2.1
HCN3Q9P1Z3 Y_RNA.551-201ENST00000384661 102 ntBASIC1.92□□□□□ -2.1
HCN3Q9P1Z3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.92□□□□□ -2.1
HCN3Q9P1Z3 RNU2-54P-201ENST00000410299 190 ntBASIC1.92□□□□□ -2.1
HCN3Q9P1Z3 RNU5A-5P-201ENST00000411054 116 ntBASIC1.92□□□□□ -2.1
HCN3Q9P1Z3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
HCN3Q9P1Z3 AC069257.2-201ENST00000441819 155 ntBASIC1.92□□□□□ -2.1
HCN3Q9P1Z3 RPL23AP42-201ENST00000471152 471 ntBASIC1.92□□□□□ -2.1
HCN3Q9P1Z3 RNU7-110P-201ENST00000516891 62 ntBASIC1.92□□□□□ -2.1
HCN3Q9P1Z3 RNU2-12P-201ENST00000517216 168 ntBASIC1.92□□□□□ -2.1
HCN3Q9P1Z3 AC024995.1-201ENST00000523014 93 ntBASIC1.92□□□□□ -2.1
HCN3Q9P1Z3 uc_338.20-201ENST00000621563 178 ntBASIC1.92□□□□□ -2.1
HCN3Q9P1Z3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 SNORA27.1-201ENST00000362604 124 ntBASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 Y_RNA.158-201ENST00000363651 101 ntBASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 Y_RNA.243-201ENST00000364481 109 ntBASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 RNA5SP160-201ENST00000364866 120 ntBASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 AC009310.1-201ENST00000414414 451 ntBASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 AL445646.1-201ENST00000431784 216 ntBASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 AC073910.1-201ENST00000445047 438 ntBASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 RNA5SP458-201ENST00000516188 119 ntBASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 RNU7-172P-201ENST00000517125 64 ntBASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 SNRPGP19-201ENST00000603826 189 ntBASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 AC011373.1-201ENST00000607270 237 ntBASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 PART1_1.1-201ENST00000611761 217 ntBASIC1.91□□□□□ -2.1
HCN3Q9P1Z3 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 192.7 ms