Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 AC074133.1-201ENST00000515696 183 ntBASIC1.63□□□□□ -2.15
NLGN3Q9NZ94 RNU6-107P-201ENST00000516643 102 ntBASIC1.63□□□□□ -2.15
NLGN3Q9NZ94 RNU6-1153P-201ENST00000516760 105 ntBASIC1.63□□□□□ -2.15
NLGN3Q9NZ94 RN7SKP295-201ENST00000517264 153 ntBASIC1.63□□□□□ -2.15
NLGN3Q9NZ94 DNAJC19P9-201ENST00000555084 351 ntBASIC1.63□□□□□ -2.15
NLGN3Q9NZ94 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.63□□□□□ -2.15
NLGN3Q9NZ94 AL512598.1-201ENST00000610158 273 ntBASIC1.63□□□□□ -2.15
NLGN3Q9NZ94 AL353149.1-201ENST00000610667 244 ntBASIC1.63□□□□□ -2.15
NLGN3Q9NZ94 MIR338-201ENST00000636369 67 ntBASIC1.63□□□□□ -2.15
NLGN3Q9NZ94 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
NLGN3Q9NZ94 AC091812.1-201ENST00000432235 1948 ntBASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 Y_RNA.27-201ENST00000362540 103 ntBASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 Y_RNA.216-201ENST00000364205 93 ntBASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 RNU6-454P-201ENST00000364292 107 ntBASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 Y_RNA.287-201ENST00000364853 94 ntBASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 RNU6-1264P-201ENST00000383891 107 ntBASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 TOMM22P2-201ENST00000430735 237 ntBASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 AC112492.4-201ENST00000456549 352 ntBASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 Y_RNA.631-201ENST00000459607 101 ntBASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 Y_RNA.701-201ENST00000516812 110 ntBASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 SUMO2P18-201ENST00000518873 252 ntBASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 CYCSP23-201ENST00000519781 313 ntBASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 CBX3P4-201ENST00000538909 354 ntBASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 AC020661.2-201ENST00000560114 134 ntBASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 AC022254.1-201ENST00000567857 235 ntBASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 SNORD53B-201ENST00000577887 78 ntBASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 AL359821.1-201ENST00000605519 182 ntBASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
NLGN3Q9NZ94 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 MIR410-201ENST00000362222 80 ntBASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 snoU2-30.2-201ENST00000362805 70 ntBASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 RNY1P10-201ENST00000363268 113 ntBASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 SNORD78.2-201ENST00000391076 69 ntBASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 AC009310.1-201ENST00000414414 451 ntBASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 AL160004.2-201ENST00000432935 350 ntBASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 MTCYBP6-201ENST00000441810 138 ntBASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 RNU6-408P-201ENST00000515910 100 ntBASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 Y_RNA.673-201ENST00000516306 88 ntBASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 Y_RNA.711-201ENST00000516993 102 ntBASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 SUB1P4-201ENST00000566062 339 ntBASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 MIR5094-201ENST00000578766 85 ntBASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 AC134503.1-201ENST00000633048 54 ntBASIC1.61□□□□□ -2.15
NLGN3Q9NZ94 Y_RNA.28-201ENST00000362554 111 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 Y_RNA.128-201ENST00000363391 112 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 SNORD48-201ENST00000364953 64 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 RNA5SP363-201ENST00000365072 115 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 Y_RNA.498-201ENST00000384460 102 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 Y_RNA.645-201ENST00000391229 102 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 MIR548P-201ENST00000408336 84 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 RNA5SP100-201ENST00000410903 110 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 RNA5SP59-201ENST00000410922 110 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 MTND1P14-201ENST00000427400 950 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 AC245047.4-201ENST00000433189 144 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 RNU6-966P-201ENST00000516479 104 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 SNORA40.14-201ENST00000516543 86 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 MIR4659A-201ENST00000580269 81 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 AC240442.1-201ENST00000616055 283 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.6□□□□□ -2.15
NLGN3Q9NZ94 RNU1-96P-201ENST00000364163 162 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 Y_RNA.226-201ENST00000364337 114 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 RNU6-1240P-201ENST00000365155 104 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 SNORA22B-201ENST00000383876 138 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 RNU6-417P-201ENST00000384712 107 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 MIR1302-11-201ENST00000408051 138 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 MIR1302-9-201ENST00000408365 138 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 MIR1302-10-201ENST00000408734 138 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 SDAD1P3-201ENST00000427380 333 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 FCF1P4-201ENST00000448326 183 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 RNU7-95P-201ENST00000459222 64 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 AC010409.1-201ENST00000487382 476 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 TRMT112P2-201ENST00000512910 132 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 SNORA44.1-201ENST00000517031 108 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 MIR3171-201ENST00000584270 74 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 MIR1302-2-201ENST00000607096 138 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 AC103810.8-201ENST00000607347 118 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 AC022140.2-201ENST00000623500 188 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 MIR3674-201ENST00000636576 68 ntBASIC1.59□□□□□ -2.15
NLGN3Q9NZ94 Y_RNA.11-201ENST00000362375 109 ntBASIC1.58□□□□□ -2.16
NLGN3Q9NZ94 MRPL35P1-201ENST00000404272 572 ntBASIC1.58□□□□□ -2.16
NLGN3Q9NZ94 AL355796.1-201ENST00000406706 323 ntBASIC1.58□□□□□ -2.16
NLGN3Q9NZ94 MTCO3P19-201ENST00000415864 321 ntBASIC1.58□□□□□ -2.16
NLGN3Q9NZ94 AC008134.1-201ENST00000420943 193 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms