Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 RNU6-487P-201ENST00000365430 104 ntBASIC3.63□□□□□ -1.83
ATG3Q9NT62 SNORA67.4-201ENST00000384688 142 ntBASIC3.63□□□□□ -1.83
ATG3Q9NT62 MIR1278-201ENST00000408753 81 ntBASIC3.63□□□□□ -1.83
ATG3Q9NT62 AC027124.2-201ENST00000428249 105 ntBASIC3.63□□□□□ -1.83
ATG3Q9NT62 RN7SKP43-201ENST00000516173 320 ntBASIC3.63□□□□□ -1.83
ATG3Q9NT62 RNU1-117P-201ENST00000517041 158 ntBASIC3.63□□□□□ -1.83
ATG3Q9NT62 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.63□□□□□ -1.83
ATG3Q9NT62 MIR3923-201ENST00000579521 83 ntBASIC3.63□□□□□ -1.83
ATG3Q9NT62 MIR3121-201ENST00000579680 77 ntBASIC3.63□□□□□ -1.83
ATG3Q9NT62 PCGEM1.1-201ENST00000613431 131 ntBASIC3.63□□□□□ -1.83
ATG3Q9NT62 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.63□□□□□ -1.83
ATG3Q9NT62 AC068205.3-201ENST00000636385 468 ntBASIC3.63□□□□□ -1.83
ATG3Q9NT62 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.63□□□□□ -1.83
ATG3Q9NT62 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATG3Q9NT62 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ATG3Q9NT62 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ATG3Q9NT62 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
ATG3Q9NT62 Y_RNA.40-201ENST00000362645 93 ntBASIC3.62□□□□□ -1.83
ATG3Q9NT62 RNU6-529P-201ENST00000363383 104 ntBASIC3.62□□□□□ -1.83
ATG3Q9NT62 SNORA67.2-201ENST00000384300 149 ntBASIC3.62□□□□□ -1.83
ATG3Q9NT62 Y_RNA.584-201ENST00000391090 114 ntBASIC3.62□□□□□ -1.83
ATG3Q9NT62 MIR320B2-201ENST00000408479 138 ntBASIC3.62□□□□□ -1.83
ATG3Q9NT62 RNA5SP201-201ENST00000410316 124 ntBASIC3.62□□□□□ -1.83
ATG3Q9NT62 Y_RNA.622-201ENST00000411091 108 ntBASIC3.62□□□□□ -1.83
ATG3Q9NT62 AC004386.2-201ENST00000441858 148 ntBASIC3.62□□□□□ -1.83
ATG3Q9NT62 SNRPGP8-201ENST00000454064 226 ntBASIC3.62□□□□□ -1.83
ATG3Q9NT62 RN7SL633P-201ENST00000488974 297 ntBASIC3.62□□□□□ -1.83
ATG3Q9NT62 RNU6-344P-201ENST00000516635 111 ntBASIC3.62□□□□□ -1.83
ATG3Q9NT62 NDUFA5P6-201ENST00000542110 379 ntBASIC3.62□□□□□ -1.83
ATG3Q9NT62 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.62□□□□□ -1.83
ATG3Q9NT62 MIR3136-201ENST00000583498 78 ntBASIC3.62□□□□□ -1.83
ATG3Q9NT62 SNORD11B-201ENST00000607707 90 ntBASIC3.62□□□□□ -1.83
ATG3Q9NT62 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.62□□□□□ -1.83
ATG3Q9NT62 Z82209.1-201ENST00000422141 2135 ntBASIC3.62□□□□□ -1.83
ATG3Q9NT62 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.61□□□□□ -1.83
ATG3Q9NT62 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATG3Q9NT62 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
ATG3Q9NT62 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
ATG3Q9NT62 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.61□□□□□ -1.83
ATG3Q9NT62 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.61□□□□□ -1.83
ATG3Q9NT62 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
ATG3Q9NT62 Y_RNA.35-201ENST00000362601 101 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 RNU6-859P-201ENST00000362728 107 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 U8.1-201ENST00000362843 134 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 SNORD45.3-201ENST00000363836 72 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 RNA5SP68-201ENST00000363885 119 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 MIR767-201ENST00000390228 109 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 RNA5SP354-201ENST00000391247 136 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 RNA5SP21-201ENST00000410917 96 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 RNA5SP508-201ENST00000411327 119 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 TRIAP1P1-201ENST00000427062 225 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 AC009414.1-201ENST00000427200 443 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 AL158147.1-201ENST00000443970 75 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 AL513328.1-201ENST00000446460 224 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 AC012308.1-201ENST00000451232 178 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.61□□□□□ -1.83
ATG3Q9NT62 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.61□□□□□ -1.83
ATG3Q9NT62 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.61□□□□□ -1.83
ATG3Q9NT62 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.61□□□□□ -1.83
ATG3Q9NT62 MIR4506-201ENST00000584693 77 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 AC025754.2-201ENST00000606491 432 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 AC002064.3-201ENST00000623448 346 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 snoZ196.1-201ENST00000625269 89 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 U6.95-201ENST00000636931 70 ntBASIC3.61□□□□□ -1.83
ATG3Q9NT62 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.61□□□□□ -1.83
ATG3Q9NT62 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
ATG3Q9NT62 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
ATG3Q9NT62 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
ATG3Q9NT62 MIR367-201ENST00000362299 68 ntBASIC3.6□□□□□ -1.83
ATG3Q9NT62 RNU6-597P-201ENST00000365620 102 ntBASIC3.6□□□□□ -1.83
ATG3Q9NT62 SNORA18.2-201ENST00000383865 132 ntBASIC3.6□□□□□ -1.83
ATG3Q9NT62 RNU6-144P-201ENST00000383951 107 ntBASIC3.6□□□□□ -1.83
ATG3Q9NT62 AL133475.1-201ENST00000404414 305 ntBASIC3.6□□□□□ -1.83
ATG3Q9NT62 MTCO1P44-201ENST00000441935 243 ntBASIC3.6□□□□□ -1.83
ATG3Q9NT62 RPS29P12-201ENST00000460178 152 ntBASIC3.6□□□□□ -1.83
ATG3Q9NT62 TRBV12-1-201ENST00000479785 344 ntBASIC3.6□□□□□ -1.83
ATG3Q9NT62 AC117454.1-201ENST00000491120 168 ntBASIC3.6□□□□□ -1.83
ATG3Q9NT62 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.6□□□□□ -1.83
ATG3Q9NT62 AC025281.1-201ENST00000567026 265 ntBASIC3.6□□□□□ -1.83
ATG3Q9NT62 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.6□□□□□ -1.83
ATG3Q9NT62 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.6□□□□□ -1.83
ATG3Q9NT62 AL034555.1-201ENST00000604816 211 ntBASIC3.6□□□□□ -1.83
ATG3Q9NT62 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.6□□□□□ -1.83
ATG3Q9NT62 AC005562.2-201ENST00000618264 111 ntBASIC3.6□□□□□ -1.83
ATG3Q9NT62 AC008555.8-201ENST00000623602 2168 ntBASIC3.59□□□□□ -1.83
ATG3Q9NT62 SNORA20B-201ENST00000384220 132 ntBASIC3.59□□□□□ -1.83
ATG3Q9NT62 RNU2-49P-201ENST00000410666 184 ntBASIC3.59□□□□□ -1.83
ATG3Q9NT62 UQCRHP3-201ENST00000451503 251 ntBASIC3.59□□□□□ -1.83
ATG3Q9NT62 RN7SL75P-201ENST00000461926 281 ntBASIC3.59□□□□□ -1.83
ATG3Q9NT62 Y_RNA.694-201ENST00000516677 117 ntBASIC3.59□□□□□ -1.83
ATG3Q9NT62 Y_RNA.757-201ENST00000578934 114 ntBASIC3.59□□□□□ -1.83
ATG3Q9NT62 TCL6_2.1-201ENST00000615162 119 ntBASIC3.59□□□□□ -1.83
ATG3Q9NT62 MIR6817-201ENST00000615588 66 ntBASIC3.59□□□□□ -1.83
ATG3Q9NT62 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
ATG3Q9NT62 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
ATG3Q9NT62 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.59□□□□□ -1.84
ATG3Q9NT62 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
ATG3Q9NT62 AC002543.1-201ENST00000299783 1954 ntBASIC3.58□□□□□ -1.84
ATG3Q9NT62 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ATG3Q9NT62 RNU4-15P-201ENST00000362613 141 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms