Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS45Q9NRW7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.41□□□□□ -2.02
VPS45Q9NRW7 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VPS45Q9NRW7 MIR335-201ENST00000362173 94 ntBASIC2.4□□□□□ -2.03
VPS45Q9NRW7 Y_RNA.188-201ENST00000363952 111 ntBASIC2.4□□□□□ -2.03
VPS45Q9NRW7 RNU6-743P-201ENST00000364151 106 ntBASIC2.4□□□□□ -2.03
VPS45Q9NRW7 Y_RNA.446-201ENST00000384178 104 ntBASIC2.4□□□□□ -2.03
VPS45Q9NRW7 RNU2-54P-201ENST00000410299 190 ntBASIC2.4□□□□□ -2.03
VPS45Q9NRW7 RPL23AP42-201ENST00000471152 471 ntBASIC2.4□□□□□ -2.03
VPS45Q9NRW7 AC007229.1-201ENST00000590455 412 ntBASIC2.4□□□□□ -2.03
VPS45Q9NRW7 AC006380.1-201ENST00000603598 186 ntBASIC2.4□□□□□ -2.03
VPS45Q9NRW7 AP001282.2-201ENST00000616149 309 ntBASIC2.4□□□□□ -2.03
VPS45Q9NRW7 AL590240.4-201ENST00000616908 390 ntBASIC2.4□□□□□ -2.03
VPS45Q9NRW7 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.4□□□□□ -2.03
VPS45Q9NRW7 AC127459.3-201ENST00000624328 466 ntBASIC2.4□□□□□ -2.03
VPS45Q9NRW7 AC005336.3-201ENST00000623833 2679 ntBASIC2.4□□□□□ -2.03
VPS45Q9NRW7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.39□□□□□ -2.03
VPS45Q9NRW7 AL391987.6-201ENST00000305671 199 ntBASIC2.39□□□□□ -2.03
VPS45Q9NRW7 RNU1-58P-201ENST00000362413 163 ntBASIC2.39□□□□□ -2.03
VPS45Q9NRW7 Y_RNA.286-201ENST00000364813 102 ntBASIC2.39□□□□□ -2.03
VPS45Q9NRW7 RNU6-975P-201ENST00000384296 105 ntBASIC2.39□□□□□ -2.03
VPS45Q9NRW7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.39□□□□□ -2.03
VPS45Q9NRW7 MIR1185-2-201ENST00000408687 86 ntBASIC2.39□□□□□ -2.03
VPS45Q9NRW7 RNU7-57P-201ENST00000459540 60 ntBASIC2.39□□□□□ -2.03
VPS45Q9NRW7 HMGB3P17-201ENST00000504195 649 ntBASIC2.39□□□□□ -2.03
VPS45Q9NRW7 RNU6-1338P-201ENST00000516328 91 ntBASIC2.39□□□□□ -2.03
VPS45Q9NRW7 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.39□□□□□ -2.03
VPS45Q9NRW7 AC110588.1-201ENST00000559699 137 ntBASIC2.39□□□□□ -2.03
VPS45Q9NRW7 MIR3671-201ENST00000580455 88 ntBASIC2.39□□□□□ -2.03
VPS45Q9NRW7 MIR5007-201ENST00000583098 95 ntBASIC2.39□□□□□ -2.03
VPS45Q9NRW7 AC008749.1-201ENST00000597650 306 ntBASIC2.39□□□□□ -2.03
VPS45Q9NRW7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS45Q9NRW7 AC092881.1-201ENST00000638218 2733 ntBASIC2.38□□□□□ -2.03
VPS45Q9NRW7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
VPS45Q9NRW7 Y_RNA.14-201ENST00000362415 103 ntBASIC2.38□□□□□ -2.03
VPS45Q9NRW7 RNU6-454P-201ENST00000364292 107 ntBASIC2.38□□□□□ -2.03
VPS45Q9NRW7 Y_RNA.350-201ENST00000365409 98 ntBASIC2.38□□□□□ -2.03
VPS45Q9NRW7 SNORA6-201ENST00000384033 151 ntBASIC2.38□□□□□ -2.03
VPS45Q9NRW7 SNORA53-201ENST00000391141 249 ntBASIC2.38□□□□□ -2.03
VPS45Q9NRW7 RNU2-38P-201ENST00000410856 79 ntBASIC2.38□□□□□ -2.03
VPS45Q9NRW7 AC139712.2-201ENST00000424302 339 ntBASIC2.38□□□□□ -2.03
VPS45Q9NRW7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS45Q9NRW7 RPL39P38-201ENST00000467018 153 ntBASIC2.38□□□□□ -2.03
VPS45Q9NRW7 RNU6-155P-201ENST00000516347 100 ntBASIC2.38□□□□□ -2.03
VPS45Q9NRW7 RNU6-948P-201ENST00000516374 107 ntBASIC2.38□□□□□ -2.03
VPS45Q9NRW7 RNU2-12P-201ENST00000517216 168 ntBASIC2.38□□□□□ -2.03
VPS45Q9NRW7 DEFB108E-201ENST00000524692 240 ntBASIC2.38□□□□□ -2.03
VPS45Q9NRW7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.38□□□□□ -2.03
VPS45Q9NRW7 AC037487.3-201ENST00000606668 112 ntBASIC2.38□□□□□ -2.03
VPS45Q9NRW7 AC046143.2-201ENST00000609789 160 ntBASIC2.38□□□□□ -2.03
VPS45Q9NRW7 AC022202.1-201ENST00000613515 211 ntBASIC2.38□□□□□ -2.03
VPS45Q9NRW7 snoZ196.1-201ENST00000625269 89 ntBASIC2.38□□□□□ -2.03
VPS45Q9NRW7 MTND5P6-201ENST00000422338 1798 ntBASIC2.38□□□□□ -2.03
VPS45Q9NRW7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VPS45Q9NRW7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS45Q9NRW7 Y_RNA.16-201ENST00000362421 102 ntBASIC2.37□□□□□ -2.03
VPS45Q9NRW7 RNU6-1164P-201ENST00000364428 107 ntBASIC2.37□□□□□ -2.03
VPS45Q9NRW7 Y_RNA.237-201ENST00000364439 102 ntBASIC2.37□□□□□ -2.03
VPS45Q9NRW7 Y_RNA.307-201ENST00000365022 117 ntBASIC2.37□□□□□ -2.03
VPS45Q9NRW7 RNU1-51P-201ENST00000365345 176 ntBASIC2.37□□□□□ -2.03
VPS45Q9NRW7 Y_RNA.562-201ENST00000384695 113 ntBASIC2.37□□□□□ -2.03
VPS45Q9NRW7 Y_RNA.569-201ENST00000384749 103 ntBASIC2.37□□□□□ -2.03
VPS45Q9NRW7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
VPS45Q9NRW7 AL355497.1-201ENST00000406262 551 ntBASIC2.37□□□□□ -2.03
VPS45Q9NRW7 RNU6-1199P-201ENST00000411249 104 ntBASIC2.37□□□□□ -2.03
VPS45Q9NRW7 POLR2KP2-201ENST00000438155 177 ntBASIC2.37□□□□□ -2.03
VPS45Q9NRW7 MTND4LP30-201ENST00000454092 297 ntBASIC2.37□□□□□ -2.03
VPS45Q9NRW7 RNU6-1271P-201ENST00000517049 105 ntBASIC2.37□□□□□ -2.03
VPS45Q9NRW7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS45Q9NRW7 MIR3684-201ENST00000579779 74 ntBASIC2.37□□□□□ -2.03
VPS45Q9NRW7 SDR42E1P4-201ENST00000620894 481 ntBASIC2.37□□□□□ -2.03
VPS45Q9NRW7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
VPS45Q9NRW7 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
VPS45Q9NRW7 RNU6-326P-201ENST00000365480 107 ntBASIC2.36□□□□□ -2.03
VPS45Q9NRW7 RNU6-1235P-201ENST00000384559 107 ntBASIC2.36□□□□□ -2.03
VPS45Q9NRW7 MIR1283-2-201ENST00000408621 87 ntBASIC2.36□□□□□ -2.03
VPS45Q9NRW7 RNA5SP450-201ENST00000411206 102 ntBASIC2.36□□□□□ -2.03
VPS45Q9NRW7 AL357134.1-201ENST00000445848 426 ntBASIC2.36□□□□□ -2.03
VPS45Q9NRW7 HMGN2P23-201ENST00000456759 269 ntBASIC2.36□□□□□ -2.03
VPS45Q9NRW7 RNU6-498P-201ENST00000459468 107 ntBASIC2.36□□□□□ -2.03
VPS45Q9NRW7 SERF1AP1-201ENST00000514575 187 ntBASIC2.36□□□□□ -2.03
VPS45Q9NRW7 RNU6-966P-201ENST00000516479 104 ntBASIC2.36□□□□□ -2.03
VPS45Q9NRW7 RNU2-31P-201ENST00000516954 155 ntBASIC2.36□□□□□ -2.03
VPS45Q9NRW7 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS45Q9NRW7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
VPS45Q9NRW7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS45Q9NRW7 Y_RNA.243-201ENST00000364481 109 ntBASIC2.35□□□□□ -2.03
VPS45Q9NRW7 Y_RNA.383-201ENST00000383855 97 ntBASIC2.35□□□□□ -2.03
VPS45Q9NRW7 Y_RNA.447-201ENST00000384184 113 ntBASIC2.35□□□□□ -2.03
VPS45Q9NRW7 Y_RNA.476-201ENST00000384347 108 ntBASIC2.35□□□□□ -2.03
VPS45Q9NRW7 Y_RNA.489-201ENST00000384410 101 ntBASIC2.35□□□□□ -2.03
VPS45Q9NRW7 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
VPS45Q9NRW7 MIR548H3-201ENST00000408771 118 ntBASIC2.35□□□□□ -2.03
VPS45Q9NRW7 AC016717.1-201ENST00000448918 286 ntBASIC2.35□□□□□ -2.03
VPS45Q9NRW7 SUMO1P2-201ENST00000452524 304 ntBASIC2.35□□□□□ -2.03
VPS45Q9NRW7 RPL23AP3-201ENST00000453844 468 ntBASIC2.35□□□□□ -2.03
VPS45Q9NRW7 RNU6-221P-201ENST00000459541 99 ntBASIC2.35□□□□□ -2.03
VPS45Q9NRW7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.35□□□□□ -2.03
VPS45Q9NRW7 AC121758.2-201ENST00000553271 193 ntBASIC2.35□□□□□ -2.03
VPS45Q9NRW7 AC012433.1-201ENST00000588916 398 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms