Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RN7SL442P-201ENST00000473804 320 ntBASIC4.53□□□□□ -1.68
RTN4Q9NQC3 CYCTP-201ENST00000504253 315 ntBASIC4.53□□□□□ -1.68
RTN4Q9NQC3 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC4.53□□□□□ -1.68
RTN4Q9NQC3 AL591424.2-201ENST00000617023 128 ntBASIC4.53□□□□□ -1.68
RTN4Q9NQC3 AC027279.3-201ENST00000625055 122 ntBASIC4.53□□□□□ -1.68
RTN4Q9NQC3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RTN4Q9NQC3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RTN4Q9NQC3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RTN4Q9NQC3 AC011998.1-201ENST00000433403 117 ntBASIC4.52□□□□□ -1.69
RTN4Q9NQC3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC4.52□□□□□ -1.69
RTN4Q9NQC3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.52□□□□□ -1.69
RTN4Q9NQC3 RN7SL810P-201ENST00000493031 276 ntBASIC4.52□□□□□ -1.69
RTN4Q9NQC3 SNORD45.4-201ENST00000516629 73 ntBASIC4.52□□□□□ -1.69
RTN4Q9NQC3 RNU7-143P-201ENST00000516781 65 ntBASIC4.52□□□□□ -1.69
RTN4Q9NQC3 AC006441.5-201ENST00000612680 209 ntBASIC4.52□□□□□ -1.69
RTN4Q9NQC3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RTN4Q9NQC3 RNU1-70P-201ENST00000362618 164 ntBASIC4.51□□□□□ -1.69
RTN4Q9NQC3 AL606517.2-201ENST00000442855 241 ntBASIC4.51□□□□□ -1.69
RTN4Q9NQC3 Y_RNA.692-201ENST00000516627 105 ntBASIC4.51□□□□□ -1.69
RTN4Q9NQC3 SNORD14A-201ENST00000606526 91 ntBASIC4.51□□□□□ -1.69
RTN4Q9NQC3 MIR6798-201ENST00000612887 67 ntBASIC4.51□□□□□ -1.69
RTN4Q9NQC3 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RTN4Q9NQC3 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RTN4Q9NQC3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.51□□□□□ -1.69
RTN4Q9NQC3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RTN4Q9NQC3 SNORA80E-201ENST00000384744 137 ntBASIC4.5□□□□□ -1.69
RTN4Q9NQC3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RTN4Q9NQC3 RNU6-460P-201ENST00000391158 108 ntBASIC4.5□□□□□ -1.69
RTN4Q9NQC3 PTMAP2-201ENST00000397627 327 ntBASIC4.5□□□□□ -1.69
RTN4Q9NQC3 SNORA57.3-201ENST00000411095 141 ntBASIC4.5□□□□□ -1.69
RTN4Q9NQC3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.5□□□□□ -1.69
RTN4Q9NQC3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
RTN4Q9NQC3 RNA5SP272-201ENST00000516095 111 ntBASIC4.5□□□□□ -1.69
RTN4Q9NQC3 RNU6-693P-201ENST00000516134 107 ntBASIC4.5□□□□□ -1.69
RTN4Q9NQC3 GS1-279B7.1-204ENST00000641809 378 ntBASIC4.5□□□□□ -1.69
RTN4Q9NQC3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.5□□□□□ -1.69
RTN4Q9NQC3 RNU6-915P-201ENST00000364943 103 ntBASIC4.49□□□□□ -1.69
RTN4Q9NQC3 SNORD50B-201ENST00000364995 70 ntBASIC4.49□□□□□ -1.69
RTN4Q9NQC3 SNORA20-201ENST00000384662 132 ntBASIC4.49□□□□□ -1.69
RTN4Q9NQC3 MIR524-201ENST00000385242 87 ntBASIC4.49□□□□□ -1.69
RTN4Q9NQC3 Y_RNA.625-201ENST00000411256 107 ntBASIC4.49□□□□□ -1.69
RTN4Q9NQC3 AC007064.1-201ENST00000412238 351 ntBASIC4.49□□□□□ -1.69
RTN4Q9NQC3 AC006011.1-201ENST00000442758 349 ntBASIC4.49□□□□□ -1.69
RTN4Q9NQC3 RNU1-104P-201ENST00000517280 175 ntBASIC4.49□□□□□ -1.69
RTN4Q9NQC3 AC007751.1-201ENST00000529260 376 ntBASIC4.49□□□□□ -1.69
RTN4Q9NQC3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.49□□□□□ -1.69
RTN4Q9NQC3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.49□□□□□ -1.69
RTN4Q9NQC3 MIR6748-201ENST00000610433 71 ntBASIC4.49□□□□□ -1.69
RTN4Q9NQC3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.49□□□□□ -1.69
RTN4Q9NQC3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RTN4Q9NQC3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.48□□□□□ -1.69
RTN4Q9NQC3 SNORD61-201ENST00000384252 73 ntBASIC4.48□□□□□ -1.69
RTN4Q9NQC3 MIR192-201ENST00000384915 110 ntBASIC4.48□□□□□ -1.69
RTN4Q9NQC3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.48□□□□□ -1.69
RTN4Q9NQC3 RPS29P17-201ENST00000430795 166 ntBASIC4.48□□□□□ -1.69
RTN4Q9NQC3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.48□□□□□ -1.69
RTN4Q9NQC3 RNA5SP246-201ENST00000458909 119 ntBASIC4.48□□□□□ -1.69
RTN4Q9NQC3 AC004486.1-201ENST00000546846 233 ntBASIC4.48□□□□□ -1.69
RTN4Q9NQC3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RTN4Q9NQC3 SUB1P4-201ENST00000566062 339 ntBASIC4.48□□□□□ -1.69
RTN4Q9NQC3 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
RTN4Q9NQC3 RNU6-1154P-201ENST00000391001 104 ntBASIC4.47□□□□□ -1.69
RTN4Q9NQC3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.47□□□□□ -1.69
RTN4Q9NQC3 RPL23AP46-201ENST00000438548 490 ntBASIC4.47□□□□□ -1.69
RTN4Q9NQC3 TRBV12-2-201ENST00000489763 344 ntBASIC4.47□□□□□ -1.69
RTN4Q9NQC3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.47□□□□□ -1.69
RTN4Q9NQC3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTN4Q9NQC3 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RTN4Q9NQC3 RNA5SP505-201ENST00000364748 108 ntBASIC4.46□□□□□ -1.7
RTN4Q9NQC3 RNU6-80P-201ENST00000384195 107 ntBASIC4.46□□□□□ -1.7
RTN4Q9NQC3 SNORD38C-201ENST00000384381 69 ntBASIC4.46□□□□□ -1.7
RTN4Q9NQC3 RNU6-163P-201ENST00000384396 106 ntBASIC4.46□□□□□ -1.7
RTN4Q9NQC3 SUMO1P4-201ENST00000429430 302 ntBASIC4.46□□□□□ -1.7
RTN4Q9NQC3 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.46□□□□□ -1.7
RTN4Q9NQC3 RNU6-1211P-201ENST00000459179 105 ntBASIC4.46□□□□□ -1.7
RTN4Q9NQC3 RN7SKP179-201ENST00000516126 217 ntBASIC4.46□□□□□ -1.7
RTN4Q9NQC3 Y_RNA.666-201ENST00000516187 112 ntBASIC4.46□□□□□ -1.7
RTN4Q9NQC3 RNVU1-2-201ENST00000516326 135 ntBASIC4.46□□□□□ -1.7
RTN4Q9NQC3 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.46□□□□□ -1.7
RTN4Q9NQC3 AC134878.1-201ENST00000619901 243 ntBASIC4.46□□□□□ -1.7
RTN4Q9NQC3 MIR7153-201ENST00000637758 57 ntBASIC4.46□□□□□ -1.7
RTN4Q9NQC3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RTN4Q9NQC3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RTN4Q9NQC3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RTN4Q9NQC3 RNA5SP443-201ENST00000363083 132 ntBASIC4.45□□□□□ -1.7
RTN4Q9NQC3 Y_RNA.410-201ENST00000383992 113 ntBASIC4.45□□□□□ -1.7
RTN4Q9NQC3 RNA5SP501-201ENST00000410990 112 ntBASIC4.45□□□□□ -1.7
RTN4Q9NQC3 RN7SL271P-201ENST00000487601 295 ntBASIC4.45□□□□□ -1.7
RTN4Q9NQC3 RNU6-1270P-201ENST00000517128 108 ntBASIC4.45□□□□□ -1.7
RTN4Q9NQC3 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.45□□□□□ -1.7
RTN4Q9NQC3 MIR4715-201ENST00000584117 79 ntBASIC4.45□□□□□ -1.7
RTN4Q9NQC3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.45□□□□□ -1.7
RTN4Q9NQC3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RTN4Q9NQC3 RNU6-1168P-201ENST00000390831 104 ntBASIC4.44□□□□□ -1.7
RTN4Q9NQC3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.44□□□□□ -1.7
RTN4Q9NQC3 RNU6-971P-201ENST00000516920 106 ntBASIC4.44□□□□□ -1.7
RTN4Q9NQC3 MIR7151-201ENST00000617477 60 ntBASIC4.44□□□□□ -1.7
RTN4Q9NQC3 AC012442.3-202ENST00000636742 206 ntBASIC4.44□□□□□ -1.7
RTN4Q9NQC3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
RTN4Q9NQC3 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms