Protein–RNA interactions for Protein: Q9H6I2

SOX17, Transcription factor SOX-17, humanhuman

Predicted RBP Predictions only

Length 414 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17Q9H6I2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SOX17Q9H6I2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
SOX17Q9H6I2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
SOX17Q9H6I2 Y_RNA.52-201ENST00000362760 96 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 RNU1-33P-201ENST00000364249 162 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 Y_RNA.486-201ENST00000384398 107 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 FO393413.1-201ENST00000402892 195 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 RNU6-1186P-201ENST00000410429 97 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 RNU6-1328P-201ENST00000410938 106 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 RNA5SP127-201ENST00000411051 133 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 AC063976.3-201ENST00000426849 329 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 AL357552.1-201ENST00000445254 415 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 HMGN1P18-201ENST00000457642 277 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 RPS26P45-201ENST00000471748 340 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.26□□□□□ -1.89
SOX17Q9H6I2 RNU2-27P-201ENST00000516185 142 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 RNU6-781P-201ENST00000516377 101 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 SCARNA3-201ENST00000517097 143 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 RNU6-365P-201ENST00000517113 106 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 AC104027.1-201ENST00000521887 300 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 MIR4662B-201ENST00000579498 81 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 MIR5739-201ENST00000619803 80 ntBASIC3.26□□□□□ -1.89
SOX17Q9H6I2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.26□□□□□ -1.89
SOX17Q9H6I2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
SOX17Q9H6I2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SOX17Q9H6I2 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.26□□□□□ -1.89
SOX17Q9H6I2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
SOX17Q9H6I2 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.26□□□□□ -1.89
SOX17Q9H6I2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SOX17Q9H6I2 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
SOX17Q9H6I2 Y_RNA.35-201ENST00000362601 101 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 RNA5SP139-201ENST00000364340 117 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 CD24P4-201ENST00000382840 243 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 MIR562-201ENST00000384894 95 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 MIR548A1-201ENST00000385041 97 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 RNA5SP293-201ENST00000410527 113 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 AL513477.1-202ENST00000417061 214 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 AC063976.4-201ENST00000421971 163 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 RPL23AP83-201ENST00000434984 473 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.25□□□□□ -1.89
SOX17Q9H6I2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.25□□□□□ -1.89
SOX17Q9H6I2 AC233266.1-201ENST00000454518 96 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 BX510359.1-201ENST00000456973 237 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 RN7SL807P-201ENST00000470923 297 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 RN7SL601P-201ENST00000471221 293 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 RNU6-126P-201ENST00000516685 103 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 SNORD59.2-201ENST00000516873 68 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 SNORA70.24-201ENST00000517233 118 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 IGKV2-26-201ENST00000518305 343 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.25□□□□□ -1.89
SOX17Q9H6I2 AC073413.2-201ENST00000604332 360 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 AL022345.2-201ENST00000606307 135 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 AC242852.1-201ENST00000612151 96 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 AC244015.1-201ENST00000622301 99 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 MAPK10-362ENST00000641864 4484 ntBASIC3.25□□□□□ -1.89
SOX17Q9H6I2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SOX17Q9H6I2 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
SOX17Q9H6I2 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SOX17Q9H6I2 SNORD56.3-201ENST00000363507 71 ntBASIC3.24□□□□□ -1.89
SOX17Q9H6I2 AC244505.4-201ENST00000434905 287 ntBASIC3.24□□□□□ -1.89
SOX17Q9H6I2 MTCO1P44-201ENST00000441935 243 ntBASIC3.24□□□□□ -1.89
SOX17Q9H6I2 SSXP5-201ENST00000443473 287 ntBASIC3.24□□□□□ -1.89
SOX17Q9H6I2 RN7SL594P-201ENST00000470590 287 ntBASIC3.24□□□□□ -1.89
SOX17Q9H6I2 AC021205.2-201ENST00000480069 347 ntBASIC3.24□□□□□ -1.89
SOX17Q9H6I2 AC096725.1-201ENST00000514266 313 ntBASIC3.24□□□□□ -1.89
SOX17Q9H6I2 SNORA64.4-201ENST00000516632 81 ntBASIC3.24□□□□□ -1.89
SOX17Q9H6I2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.24□□□□□ -1.89
SOX17Q9H6I2 U6.73-201ENST00000619194 103 ntBASIC3.24□□□□□ -1.89
SOX17Q9H6I2 MIR7157-201ENST00000635801 60 ntBASIC3.24□□□□□ -1.89
SOX17Q9H6I2 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.24□□□□□ -1.89
SOX17Q9H6I2 AL136360.1-201ENST00000503377 1900 ntBASIC3.24□□□□□ -1.89
SOX17Q9H6I2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SOX17Q9H6I2 AC073346.2-201ENST00000624724 2058 ntBASIC3.24□□□□□ -1.89
SOX17Q9H6I2 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SOX17Q9H6I2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SOX17Q9H6I2 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SOX17Q9H6I2 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SOX17Q9H6I2 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SOX17Q9H6I2 AC008555.8-201ENST00000623602 2168 ntBASIC3.24□□□□□ -1.89
SOX17Q9H6I2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SOX17Q9H6I2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SOX17Q9H6I2 MIR148B-201ENST00000362252 99 ntBASIC3.23□□□□□ -1.89
SOX17Q9H6I2 RNU6-1255P-201ENST00000363434 112 ntBASIC3.23□□□□□ -1.89
SOX17Q9H6I2 RNU6-1138P-201ENST00000365359 106 ntBASIC3.23□□□□□ -1.89
SOX17Q9H6I2 MIR491-201ENST00000384877 84 ntBASIC3.23□□□□□ -1.89
SOX17Q9H6I2 MIR23A-201ENST00000385245 73 ntBASIC3.23□□□□□ -1.89
SOX17Q9H6I2 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.23□□□□□ -1.89
SOX17Q9H6I2 U6atac.2-201ENST00000408644 118 ntBASIC3.23□□□□□ -1.89
SOX17Q9H6I2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.23□□□□□ -1.89
SOX17Q9H6I2 AC009969.1-201ENST00000438726 172 ntBASIC3.23□□□□□ -1.89
SOX17Q9H6I2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.23□□□□□ -1.89
SOX17Q9H6I2 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.23□□□□□ -1.89
SOX17Q9H6I2 RPS27P29-201ENST00000463110 252 ntBASIC3.23□□□□□ -1.89
SOX17Q9H6I2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.23□□□□□ -1.89
SOX17Q9H6I2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.23□□□□□ -1.89
SOX17Q9H6I2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SOX17Q9H6I2 MIR3129-201ENST00000581095 76 ntBASIC3.23□□□□□ -1.89
SOX17Q9H6I2 AC091178.2-201ENST00000584401 117 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms