Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AL137100.2-201ENST00000555786 315 ntBASIC1.57□□□□□ -2.16
SNX25Q9H3E2 AP001094.1-201ENST00000579805 193 ntBASIC1.57□□□□□ -2.16
SNX25Q9H3E2 AC022217.4-201ENST00000604389 163 ntBASIC1.57□□□□□ -2.16
SNX25Q9H3E2 AC133104.2-201ENST00000615272 193 ntBASIC1.57□□□□□ -2.16
SNX25Q9H3E2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.57□□□□□ -2.16
SNX25Q9H3E2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
SNX25Q9H3E2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SNX25Q9H3E2 MIR378A-201ENST00000362177 66 ntBASIC1.56□□□□□ -2.16
SNX25Q9H3E2 Y_RNA.67-201ENST00000362870 100 ntBASIC1.56□□□□□ -2.16
SNX25Q9H3E2 RNU6-203P-201ENST00000384038 104 ntBASIC1.56□□□□□ -2.16
SNX25Q9H3E2 SNORA20B-201ENST00000384220 132 ntBASIC1.56□□□□□ -2.16
SNX25Q9H3E2 RPL21P1-201ENST00000399532 476 ntBASIC1.56□□□□□ -2.16
SNX25Q9H3E2 AF228730.4-201ENST00000421457 183 ntBASIC1.56□□□□□ -2.16
SNX25Q9H3E2 CHEK2P4-201ENST00000450340 246 ntBASIC1.56□□□□□ -2.16
SNX25Q9H3E2 RNU7-99P-201ENST00000516271 62 ntBASIC1.56□□□□□ -2.16
SNX25Q9H3E2 RNU7-4P-201ENST00000516961 62 ntBASIC1.56□□□□□ -2.16
SNX25Q9H3E2 RNU1-92P-201ENST00000517017 135 ntBASIC1.56□□□□□ -2.16
SNX25Q9H3E2 LARP7P1-201ENST00000605576 316 ntBASIC1.56□□□□□ -2.16
SNX25Q9H3E2 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.56□□□□□ -2.16
SNX25Q9H3E2 AC006435.5-201ENST00000624486 112 ntBASIC1.56□□□□□ -2.16
SNX25Q9H3E2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SNX25Q9H3E2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SNX25Q9H3E2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SNX25Q9H3E2 Y_RNA.187-201ENST00000363918 113 ntBASIC1.55□□□□□ -2.16
SNX25Q9H3E2 RNU4-13P-201ENST00000364019 141 ntBASIC1.55□□□□□ -2.16
SNX25Q9H3E2 Y_RNA.463-201ENST00000384271 102 ntBASIC1.55□□□□□ -2.16
SNX25Q9H3E2 MIR194-1-201ENST00000384892 85 ntBASIC1.55□□□□□ -2.16
SNX25Q9H3E2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
SNX25Q9H3E2 MIR934-201ENST00000401241 83 ntBASIC1.55□□□□□ -2.16
SNX25Q9H3E2 BTF3P4-201ENST00000418852 495 ntBASIC1.55□□□□□ -2.16
SNX25Q9H3E2 RAB28P5-201ENST00000427490 651 ntBASIC1.55□□□□□ -2.16
SNX25Q9H3E2 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.55□□□□□ -2.16
SNX25Q9H3E2 HSPE1P24-201ENST00000450782 238 ntBASIC1.55□□□□□ -2.16
SNX25Q9H3E2 snoU13.27-201ENST00000459278 104 ntBASIC1.55□□□□□ -2.16
SNX25Q9H3E2 RNU6-625P-201ENST00000459412 107 ntBASIC1.55□□□□□ -2.16
SNX25Q9H3E2 SNORA31.10-201ENST00000516482 106 ntBASIC1.55□□□□□ -2.16
SNX25Q9H3E2 AC144568.1-201ENST00000520139 137 ntBASIC1.55□□□□□ -2.16
SNX25Q9H3E2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.55□□□□□ -2.16
SNX25Q9H3E2 AL442163.3-201ENST00000554110 156 ntBASIC1.55□□□□□ -2.16
SNX25Q9H3E2 ZNF209P-201ENST00000593450 2304 ntBASIC1.55□□□□□ -2.16
SNX25Q9H3E2 AC100821.1-201ENST00000523153 2479 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 MIR302D-201ENST00000362275 68 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 Y_RNA.58-201ENST00000362807 102 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 Y_RNA.154-201ENST00000363624 102 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 RNU6-961P-201ENST00000363893 105 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 RNY3P1-201ENST00000365085 102 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 Y_RNA.314-201ENST00000365114 102 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 RNY3-201ENST00000365484 102 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 MIR1267-201ENST00000408723 78 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.54□□□□□ -2.16
SNX25Q9H3E2 MTCO2P27-201ENST00000420740 428 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.54□□□□□ -2.16
SNX25Q9H3E2 SNRPGP13-201ENST00000442212 177 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 MRPS10P1-201ENST00000448483 130 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.54□□□□□ -2.16
SNX25Q9H3E2 AC010469.2-201ENST00000496412 480 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 AC023157.2-201ENST00000540596 141 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 AC055872.1-201ENST00000570978 278 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 MIR4438-201ENST00000585271 93 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 AC005828.6-201ENST00000606610 232 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 Y_RNA.804-201ENST00000615262 101 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 AC091925.1-201ENST00000623204 462 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 U6.115-201ENST00000636045 103 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 MIR3674-201ENST00000636576 68 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 MTND5P10-201ENST00000603719 1809 ntBASIC1.54□□□□□ -2.16
SNX25Q9H3E2 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SNX25Q9H3E2 RNU6-1115P-201ENST00000362490 106 ntBASIC1.53□□□□□ -2.16
SNX25Q9H3E2 RNU6-926P-201ENST00000384075 107 ntBASIC1.53□□□□□ -2.16
SNX25Q9H3E2 RNY3P4-201ENST00000384428 101 ntBASIC1.53□□□□□ -2.16
SNX25Q9H3E2 Y_RNA.496-201ENST00000384444 101 ntBASIC1.53□□□□□ -2.16
SNX25Q9H3E2 Y_RNA.605-201ENST00000410577 105 ntBASIC1.53□□□□□ -2.16
SNX25Q9H3E2 AC096644.2-201ENST00000429278 159 ntBASIC1.53□□□□□ -2.16
SNX25Q9H3E2 FTH1P12-201ENST00000432137 551 ntBASIC1.53□□□□□ -2.16
SNX25Q9H3E2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
SNX25Q9H3E2 AC099799.1-201ENST00000439809 192 ntBASIC1.53□□□□□ -2.16
SNX25Q9H3E2 RPS27P22-201ENST00000478056 241 ntBASIC1.53□□□□□ -2.16
SNX25Q9H3E2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.53□□□□□ -2.16
SNX25Q9H3E2 MTND3P22-201ENST00000510932 243 ntBASIC1.53□□□□□ -2.16
SNX25Q9H3E2 RNU6-408P-201ENST00000515910 100 ntBASIC1.53□□□□□ -2.16
SNX25Q9H3E2 AL161670.1-201ENST00000554348 137 ntBASIC1.53□□□□□ -2.16
SNX25Q9H3E2 DNAJC19P9-201ENST00000555084 351 ntBASIC1.53□□□□□ -2.16
SNX25Q9H3E2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
SNX25Q9H3E2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.53□□□□□ -2.16
SNX25Q9H3E2 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.53□□□□□ -2.17
SNX25Q9H3E2 RNU6-708P-201ENST00000384217 107 ntBASIC1.52□□□□□ -2.17
SNX25Q9H3E2 MIR320A-201ENST00000385302 82 ntBASIC1.52□□□□□ -2.17
SNX25Q9H3E2 COX6CP10-201ENST00000416832 224 ntBASIC1.52□□□□□ -2.17
SNX25Q9H3E2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.52□□□□□ -2.17
SNX25Q9H3E2 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.52□□□□□ -2.17
SNX25Q9H3E2 AC009474.2-201ENST00000451383 136 ntBASIC1.52□□□□□ -2.17
SNX25Q9H3E2 snoU13.9-201ENST00000458927 103 ntBASIC1.52□□□□□ -2.17
SNX25Q9H3E2 RNU7-95P-201ENST00000459222 64 ntBASIC1.52□□□□□ -2.17
SNX25Q9H3E2 AC099513.1-201ENST00000490423 301 ntBASIC1.52□□□□□ -2.17
SNX25Q9H3E2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.52□□□□□ -2.17
SNX25Q9H3E2 MIR3684-201ENST00000579779 74 ntBASIC1.52□□□□□ -2.17
SNX25Q9H3E2 U2.1-201ENST00000618978 145 ntBASIC1.52□□□□□ -2.17
SNX25Q9H3E2 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SNX25Q9H3E2 SNORA27.1-201ENST00000362604 124 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 U8.1-201ENST00000362843 134 ntBASIC1.51□□□□□ -2.17
SNX25Q9H3E2 RNU4-73P-201ENST00000363164 141 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 316.4 ms