Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 SNORA2.2-201ENST00000365473 135 ntBASIC4.47□□□□□ -1.69
NBPF3Q9H094 RNU2-49P-201ENST00000410666 184 ntBASIC4.47□□□□□ -1.69
NBPF3Q9H094 Y_RNA.621-201ENST00000411065 96 ntBASIC4.47□□□□□ -1.69
NBPF3Q9H094 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.47□□□□□ -1.69
NBPF3Q9H094 RNU7-172P-201ENST00000517125 64 ntBASIC4.47□□□□□ -1.69
NBPF3Q9H094 RN7SKP289-201ENST00000517244 295 ntBASIC4.47□□□□□ -1.69
NBPF3Q9H094 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.47□□□□□ -1.69
NBPF3Q9H094 SCARNA15.3-201ENST00000626315 122 ntBASIC4.47□□□□□ -1.69
NBPF3Q9H094 SCARNA4.1-201ENST00000628597 123 ntBASIC4.47□□□□□ -1.69
NBPF3Q9H094 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
NBPF3Q9H094 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.47□□□□□ -1.69
NBPF3Q9H094 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NBPF3Q9H094 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NBPF3Q9H094 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NBPF3Q9H094 TNPO1P3-201ENST00000436471 2662 ntBASIC4.47□□□□□ -1.69
NBPF3Q9H094 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
NBPF3Q9H094 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.69
NBPF3Q9H094 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NBPF3Q9H094 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.46□□□□□ -1.7
NBPF3Q9H094 RNU6-652P-201ENST00000365488 107 ntBASIC4.46□□□□□ -1.7
NBPF3Q9H094 MIR577-201ENST00000385196 96 ntBASIC4.46□□□□□ -1.7
NBPF3Q9H094 MRPL35P3-201ENST00000421557 364 ntBASIC4.46□□□□□ -1.7
NBPF3Q9H094 ARF4P2-201ENST00000430209 526 ntBASIC4.46□□□□□ -1.7
NBPF3Q9H094 CYCSP35-201ENST00000451978 304 ntBASIC4.46□□□□□ -1.7
NBPF3Q9H094 AC104619.4-201ENST00000510773 249 ntBASIC4.46□□□□□ -1.7
NBPF3Q9H094 AC004486.1-201ENST00000546846 233 ntBASIC4.46□□□□□ -1.7
NBPF3Q9H094 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.46□□□□□ -1.7
NBPF3Q9H094 MIR4438-201ENST00000585271 93 ntBASIC4.46□□□□□ -1.7
NBPF3Q9H094 U6.98-201ENST00000637157 84 ntBASIC4.46□□□□□ -1.7
NBPF3Q9H094 MFSD8-236ENST00000641509 4050 ntBASIC4.45□□□□□ -1.7
NBPF3Q9H094 RNU6-50P-201ENST00000362356 103 ntBASIC4.45□□□□□ -1.7
NBPF3Q9H094 RNU6-832P-201ENST00000363319 107 ntBASIC4.45□□□□□ -1.7
NBPF3Q9H094 RNU6-418P-201ENST00000384035 107 ntBASIC4.45□□□□□ -1.7
NBPF3Q9H094 Y_RNA.426-201ENST00000384068 113 ntBASIC4.45□□□□□ -1.7
NBPF3Q9H094 RNY1P6-201ENST00000384193 109 ntBASIC4.45□□□□□ -1.7
NBPF3Q9H094 RNU1-89P-201ENST00000384592 164 ntBASIC4.45□□□□□ -1.7
NBPF3Q9H094 RNA5SP129-201ENST00000410276 118 ntBASIC4.45□□□□□ -1.7
NBPF3Q9H094 RNU2-37P-201ENST00000410695 177 ntBASIC4.45□□□□□ -1.7
NBPF3Q9H094 RNU6-1096P-201ENST00000517089 102 ntBASIC4.45□□□□□ -1.7
NBPF3Q9H094 MIR4694-201ENST00000578534 80 ntBASIC4.45□□□□□ -1.7
NBPF3Q9H094 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.45□□□□□ -1.7
NBPF3Q9H094 MIR3922-201ENST00000585192 84 ntBASIC4.45□□□□□ -1.7
NBPF3Q9H094 AC008507.4-201ENST00000585464 127 ntBASIC4.45□□□□□ -1.7
NBPF3Q9H094 YPEL5P2-201ENST00000605553 359 ntBASIC4.45□□□□□ -1.7
NBPF3Q9H094 AC091304.10-201ENST00000641554 121 ntBASIC4.45□□□□□ -1.7
NBPF3Q9H094 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
NBPF3Q9H094 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
NBPF3Q9H094 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
NBPF3Q9H094 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.45□□□□□ -1.7
NBPF3Q9H094 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NBPF3Q9H094 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NBPF3Q9H094 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NBPF3Q9H094 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.44□□□□□ -1.7
NBPF3Q9H094 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.44□□□□□ -1.7
NBPF3Q9H094 RNU6-750P-201ENST00000390946 107 ntBASIC4.44□□□□□ -1.7
NBPF3Q9H094 HSPE1P26-201ENST00000405341 275 ntBASIC4.44□□□□□ -1.7
NBPF3Q9H094 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.44□□□□□ -1.7
NBPF3Q9H094 AC084357.1-201ENST00000473404 255 ntBASIC4.44□□□□□ -1.7
NBPF3Q9H094 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NBPF3Q9H094 AC013412.1-201ENST00000610687 192 ntBASIC4.44□□□□□ -1.7
NBPF3Q9H094 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.44□□□□□ -1.7
NBPF3Q9H094 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.44□□□□□ -1.7
NBPF3Q9H094 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
NBPF3Q9H094 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NBPF3Q9H094 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
NBPF3Q9H094 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.43□□□□□ -1.7
NBPF3Q9H094 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NBPF3Q9H094 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NBPF3Q9H094 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NBPF3Q9H094 Y_RNA.454-201ENST00000384224 113 ntBASIC4.43□□□□□ -1.7
NBPF3Q9H094 Y_RNA.507-201ENST00000384500 99 ntBASIC4.43□□□□□ -1.7
NBPF3Q9H094 RPL32P34-201ENST00000486380 400 ntBASIC4.43□□□□□ -1.7
NBPF3Q9H094 RNU2-35P-201ENST00000516446 142 ntBASIC4.43□□□□□ -1.7
NBPF3Q9H094 AC008011.1-201ENST00000545989 227 ntBASIC4.43□□□□□ -1.7
NBPF3Q9H094 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.43□□□□□ -1.7
NBPF3Q9H094 MIR4305-201ENST00000583252 102 ntBASIC4.43□□□□□ -1.7
NBPF3Q9H094 MIR5187-201ENST00000583479 76 ntBASIC4.43□□□□□ -1.7
NBPF3Q9H094 MIR4777-201ENST00000583710 86 ntBASIC4.43□□□□□ -1.7
NBPF3Q9H094 MIR3651-201ENST00000630427 90 ntBASIC4.43□□□□□ -1.7
NBPF3Q9H094 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
NBPF3Q9H094 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.42□□□□□ -1.7
NBPF3Q9H094 AC017071.1-201ENST00000564407 2204 ntBASIC4.42□□□□□ -1.7
NBPF3Q9H094 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NBPF3Q9H094 Y_RNA.155-201ENST00000363632 101 ntBASIC4.42□□□□□ -1.7
NBPF3Q9H094 RNU6-60P-201ENST00000364792 103 ntBASIC4.42□□□□□ -1.7
NBPF3Q9H094 Y_RNA.360-201ENST00000365512 102 ntBASIC4.42□□□□□ -1.7
NBPF3Q9H094 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NBPF3Q9H094 Y_RNA.620-201ENST00000411009 88 ntBASIC4.42□□□□□ -1.7
NBPF3Q9H094 DBIP2-201ENST00000419076 262 ntBASIC4.42□□□□□ -1.7
NBPF3Q9H094 RN7SL330P-201ENST00000469709 307 ntBASIC4.42□□□□□ -1.7
NBPF3Q9H094 HMGN1P7-201ENST00000491722 313 ntBASIC4.42□□□□□ -1.7
NBPF3Q9H094 RPS29P21-201ENST00000496272 170 ntBASIC4.42□□□□□ -1.7
NBPF3Q9H094 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC4.42□□□□□ -1.7
NBPF3Q9H094 RN7SKP18-201ENST00000516005 275 ntBASIC4.42□□□□□ -1.7
NBPF3Q9H094 HIGD1AP1-201ENST00000550979 275 ntBASIC4.42□□□□□ -1.7
NBPF3Q9H094 AC022217.4-201ENST00000604389 163 ntBASIC4.42□□□□□ -1.7
NBPF3Q9H094 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.42□□□□□ -1.7
NBPF3Q9H094 MIR1255B1-201ENST00000636325 63 ntBASIC4.42□□□□□ -1.7
NBPF3Q9H094 AC006160.2-201ENST00000637708 154 ntBASIC4.42□□□□□ -1.7
NBPF3Q9H094 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 217.1 ms