Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC108206.1-201ENST00000570186 4159 ntBASIC3.13□□□□□ -1.91
FOXP3Q9BZS1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 SNORD116-14-201ENST00000383894 92 ntBASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 SNORD116-17-201ENST00000383929 92 ntBASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 SNORD116-15-201ENST00000384445 92 ntBASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 Y_RNA.542-201ENST00000384641 111 ntBASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 RNU6-768P-201ENST00000384683 107 ntBASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 SNORD116-19-201ENST00000384729 92 ntBASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 SNORD37.2-201ENST00000391075 66 ntBASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 MIR887-201ENST00000401258 79 ntBASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 MIR1289-1-201ENST00000408836 144 ntBASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 RNU6-57P-201ENST00000411348 103 ntBASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 UBE2DNL-203ENST00000474922 222 ntBASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 MRPS36P2-201ENST00000512569 299 ntBASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 UCA1.1-201ENST00000620952 75 ntBASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 ZNF702P-202ENST00000434269 1966 ntBASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
FOXP3Q9BZS1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 Z82209.1-201ENST00000422141 2135 ntBASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 Y_RNA.273-201ENST00000364703 102 ntBASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 Y_RNA.393-201ENST00000383936 102 ntBASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 Y_RNA.500-201ENST00000384466 111 ntBASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 SNORD88.1-201ENST00000408684 91 ntBASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 AL135786.1-201ENST00000415892 214 ntBASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 AC016717.1-201ENST00000448918 286 ntBASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 AC016925.1-201ENST00000458303 298 ntBASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 AC092991.1-201ENST00000477176 376 ntBASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 RNA5SP20-201ENST00000515976 84 ntBASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 RNU6-1333P-201ENST00000516162 93 ntBASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 TUG1_4.1-201ENST00000619464 181 ntBASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 AC002064.3-201ENST00000623448 346 ntBASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 AC006435.5-201ENST00000624486 112 ntBASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 AL137790.1-201ENST00000634283 177 ntBASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
FOXP3Q9BZS1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
FOXP3Q9BZS1 AL356292.1-201ENST00000283110 373 ntBASIC3.1□□□□□ -1.91
FOXP3Q9BZS1 AC073325.2-201ENST00000339545 159 ntBASIC3.1□□□□□ -1.91
FOXP3Q9BZS1 RNU6-674P-201ENST00000363831 107 ntBASIC3.1□□□□□ -1.91
FOXP3Q9BZS1 SNORA80A-201ENST00000363922 136 ntBASIC3.1□□□□□ -1.91
FOXP3Q9BZS1 Y_RNA.510-201ENST00000384511 114 ntBASIC3.1□□□□□ -1.91
FOXP3Q9BZS1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.1□□□□□ -1.91
FOXP3Q9BZS1 MICF-203ENST00000432679 129 ntBASIC3.1□□□□□ -1.91
FOXP3Q9BZS1 RPS27P1-201ENST00000450552 247 ntBASIC3.1□□□□□ -1.91
FOXP3Q9BZS1 RNU6-1211P-201ENST00000459179 105 ntBASIC3.1□□□□□ -1.91
FOXP3Q9BZS1 RNU6-437P-201ENST00000459408 95 ntBASIC3.1□□□□□ -1.91
FOXP3Q9BZS1 RNU6-948P-201ENST00000516374 107 ntBASIC3.1□□□□□ -1.91
FOXP3Q9BZS1 RNU6-586P-201ENST00000517265 104 ntBASIC3.1□□□□□ -1.91
FOXP3Q9BZS1 UBL5P2-201ENST00000583788 219 ntBASIC3.1□□□□□ -1.91
FOXP3Q9BZS1 MIR4298-201ENST00000584380 73 ntBASIC3.1□□□□□ -1.91
FOXP3Q9BZS1 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.1□□□□□ -1.91
FOXP3Q9BZS1 MIR6844-201ENST00000637122 62 ntBASIC3.1□□□□□ -1.91
FOXP3Q9BZS1 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.1□□□□□ -1.91
FOXP3Q9BZS1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
FOXP3Q9BZS1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
FOXP3Q9BZS1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
FOXP3Q9BZS1 Y_RNA.353-201ENST00000365440 108 ntBASIC3.09□□□□□ -1.91
FOXP3Q9BZS1 RNU6-1235P-201ENST00000384559 107 ntBASIC3.09□□□□□ -1.91
FOXP3Q9BZS1 SNORA44-201ENST00000384584 132 ntBASIC3.09□□□□□ -1.91
FOXP3Q9BZS1 RNA5SP492-201ENST00000411330 114 ntBASIC3.09□□□□□ -1.91
FOXP3Q9BZS1 RN7SKP101-201ENST00000411376 320 ntBASIC3.09□□□□□ -1.91
FOXP3Q9BZS1 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.09□□□□□ -1.91
FOXP3Q9BZS1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.09□□□□□ -1.91
FOXP3Q9BZS1 RNU6-498P-201ENST00000459468 107 ntBASIC3.09□□□□□ -1.91
FOXP3Q9BZS1 AC010531.2-201ENST00000465012 153 ntBASIC3.09□□□□□ -1.91
FOXP3Q9BZS1 RPL23AP54-201ENST00000495129 419 ntBASIC3.09□□□□□ -1.91
FOXP3Q9BZS1 RNU6-1234P-201ENST00000516877 103 ntBASIC3.09□□□□□ -1.91
FOXP3Q9BZS1 AC025647.1-201ENST00000517879 253 ntBASIC3.09□□□□□ -1.91
FOXP3Q9BZS1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.09□□□□□ -1.91
FOXP3Q9BZS1 AP001340.1-201ENST00000624405 217 ntBASIC3.09□□□□□ -1.91
FOXP3Q9BZS1 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
FOXP3Q9BZS1 SNORD45.3-201ENST00000363836 72 ntBASIC3.08□□□□□ -1.92
FOXP3Q9BZS1 RNU6-215P-201ENST00000365169 102 ntBASIC3.08□□□□□ -1.92
FOXP3Q9BZS1 RNU6-80P-201ENST00000384195 107 ntBASIC3.08□□□□□ -1.92
FOXP3Q9BZS1 SNORD20-201ENST00000384550 80 ntBASIC3.08□□□□□ -1.92
FOXP3Q9BZS1 Y_RNA.521-201ENST00000384560 114 ntBASIC3.08□□□□□ -1.92
FOXP3Q9BZS1 RNA5SP496-201ENST00000391240 109 ntBASIC3.08□□□□□ -1.92
FOXP3Q9BZS1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
FOXP3Q9BZS1 AC010154.1-201ENST00000425857 269 ntBASIC3.08□□□□□ -1.92
FOXP3Q9BZS1 RPS29P12-201ENST00000460178 152 ntBASIC3.08□□□□□ -1.92
FOXP3Q9BZS1 AC008885.1-201ENST00000514930 301 ntBASIC3.08□□□□□ -1.92
FOXP3Q9BZS1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
FOXP3Q9BZS1 AC023043.3-201ENST00000593113 385 ntBASIC3.08□□□□□ -1.92
FOXP3Q9BZS1 AL359881.1-201ENST00000602916 267 ntBASIC3.08□□□□□ -1.92
FOXP3Q9BZS1 AL033523.1-201ENST00000605153 153 ntBASIC3.08□□□□□ -1.92
FOXP3Q9BZS1 AL021707.8-201ENST00000609428 183 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms