Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.9□□□□□ -1.95
TRIM55Q9BYV6 RNU7-172P-201ENST00000517125 64 ntBASIC2.9□□□□□ -1.95
TRIM55Q9BYV6 AC107016.2-201ENST00000547968 190 ntBASIC2.9□□□□□ -1.95
TRIM55Q9BYV6 AC130289.1-201ENST00000577321 73 ntBASIC2.9□□□□□ -1.95
TRIM55Q9BYV6 RPL12P50-201ENST00000603116 116 ntBASIC2.9□□□□□ -1.95
TRIM55Q9BYV6 AC011921.3-201ENST00000605540 361 ntBASIC2.9□□□□□ -1.95
TRIM55Q9BYV6 AC073349.3-201ENST00000617616 186 ntBASIC2.9□□□□□ -1.95
TRIM55Q9BYV6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM55Q9BYV6 RNY4P28-201ENST00000365281 93 ntBASIC2.89□□□□□ -1.95
TRIM55Q9BYV6 RNU1-52P-201ENST00000384190 164 ntBASIC2.89□□□□□ -1.95
TRIM55Q9BYV6 MIR1298-201ENST00000408783 112 ntBASIC2.89□□□□□ -1.95
TRIM55Q9BYV6 OOSP1P1-201ENST00000423265 274 ntBASIC2.89□□□□□ -1.95
TRIM55Q9BYV6 U8.19-201ENST00000459095 133 ntBASIC2.89□□□□□ -1.95
TRIM55Q9BYV6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM55Q9BYV6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM55Q9BYV6 RNU6-1278P-201ENST00000516130 107 ntBASIC2.89□□□□□ -1.95
TRIM55Q9BYV6 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.89□□□□□ -1.95
TRIM55Q9BYV6 AC022513.1-201ENST00000624512 117 ntBASIC2.89□□□□□ -1.95
TRIM55Q9BYV6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.89□□□□□ -1.95
TRIM55Q9BYV6 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
TRIM55Q9BYV6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM55Q9BYV6 Y_RNA.200-201ENST00000364018 102 ntBASIC2.88□□□□□ -1.95
TRIM55Q9BYV6 RNU1-96P-201ENST00000364163 162 ntBASIC2.88□□□□□ -1.95
TRIM55Q9BYV6 RNU6-200P-201ENST00000364743 107 ntBASIC2.88□□□□□ -1.95
TRIM55Q9BYV6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.88□□□□□ -1.95
TRIM55Q9BYV6 MIR512-1-201ENST00000384913 84 ntBASIC2.88□□□□□ -1.95
TRIM55Q9BYV6 MIR518A2-201ENST00000384966 87 ntBASIC2.88□□□□□ -1.95
TRIM55Q9BYV6 RNA5SP467-201ENST00000391274 118 ntBASIC2.88□□□□□ -1.95
TRIM55Q9BYV6 HMGN2P39-201ENST00000398005 273 ntBASIC2.88□□□□□ -1.95
TRIM55Q9BYV6 EEF1A1P41-201ENST00000414667 207 ntBASIC2.88□□□□□ -1.95
TRIM55Q9BYV6 EBAG9P1-201ENST00000418955 543 ntBASIC2.88□□□□□ -1.95
TRIM55Q9BYV6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.88□□□□□ -1.95
TRIM55Q9BYV6 AC104332.1-201ENST00000440471 797 ntBASIC2.88□□□□□ -1.95
TRIM55Q9BYV6 RNU6-138P-201ENST00000515952 107 ntBASIC2.88□□□□□ -1.95
TRIM55Q9BYV6 AC007229.1-201ENST00000590455 412 ntBASIC2.88□□□□□ -1.95
TRIM55Q9BYV6 AC134026.1-201ENST00000623249 2239 ntBASIC2.88□□□□□ -1.95
TRIM55Q9BYV6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 RNU6-862P-201ENST00000362804 105 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 SNORA33-201ENST00000363664 130 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 SNORA3A-201ENST00000364113 130 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 MIR518C-201ENST00000384822 101 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 MIR597-201ENST00000384968 97 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 SNORA40.19-201ENST00000390846 128 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 MTCO2P33-201ENST00000402100 465 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 MIR1283-2-201ENST00000408621 87 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 RNU6-1186P-201ENST00000410429 97 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 RNA5SP270-201ENST00000411361 118 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 AC022018.1-201ENST00000430685 241 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 HSPE1P21-201ENST00000438283 308 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 RNU7-141P-201ENST00000459304 62 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 RPL36AP21-201ENST00000490372 323 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 RNA5SP356-201ENST00000515972 94 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 SNORA9.3-201ENST00000516383 129 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 RNU7-128P-201ENST00000517247 62 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 AL359075.3-201ENST00000613288 217 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 AC068647.2-201ENST00000637380 353 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 AC245060.5-201ENST00000610778 3293 ntBASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
TRIM55Q9BYV6 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 MIR449A-201ENST00000362113 91 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 MIR22-201ENST00000362190 85 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 Y_RNA.199-201ENST00000364014 102 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 Y_RNA.274-201ENST00000364714 101 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 RNA5SP511-201ENST00000410487 115 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 Y_RNA.626-201ENST00000411288 95 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 AC009310.1-201ENST00000414414 451 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 CST2P1-201ENST00000425770 87 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 AL139132.1-201ENST00000431587 344 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 AC099677.2-201ENST00000436385 175 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 COX6CP14-201ENST00000469580 174 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 RN7SL429P-201ENST00000479090 223 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 RN7SL489P-201ENST00000486185 223 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 RN7SL327P-201ENST00000488659 223 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 AP005660.1-201ENST00000522972 293 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 GTF3AP2-201ENST00000557014 266 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 AC015720.1-201ENST00000565251 277 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 MIR3124-201ENST00000582636 67 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 MIR3670-2-201ENST00000582974 65 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 MIR3670-1-201ENST00000584160 65 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 MIR3670-3-201ENST00000584855 65 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 AC005786.1-201ENST00000588553 154 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 MIR3670-4-201ENST00000612260 65 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 AC013791.1-201ENST00000616619 62 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 RN7SL853P-201ENST00000617250 223 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.86□□□□□ -1.95
TRIM55Q9BYV6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
TRIM55Q9BYV6 RNU6-899P-201ENST00000363947 107 ntBASIC2.85□□□□□ -1.95
TRIM55Q9BYV6 RNA5SP126-201ENST00000365092 109 ntBASIC2.85□□□□□ -1.95
TRIM55Q9BYV6 RNU6-376P-201ENST00000384731 106 ntBASIC2.85□□□□□ -1.95
TRIM55Q9BYV6 AL135786.1-201ENST00000415892 214 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms