Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 U2.6-201ENST00000619225 191 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 U2.5-201ENST00000619465 191 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 U2.10-201ENST00000620268 191 ntBASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.39□□□□□ -2.03
TRIM54Q9BYV2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
TRIM54Q9BYV2 snoU2-30.2-201ENST00000362805 70 ntBASIC2.38□□□□□ -2.03
TRIM54Q9BYV2 RNU4-80P-201ENST00000363200 141 ntBASIC2.38□□□□□ -2.03
TRIM54Q9BYV2 RNA5SP126-201ENST00000365092 109 ntBASIC2.38□□□□□ -2.03
TRIM54Q9BYV2 Y_RNA.350-201ENST00000365409 98 ntBASIC2.38□□□□□ -2.03
TRIM54Q9BYV2 Y_RNA.361-201ENST00000365515 120 ntBASIC2.38□□□□□ -2.03
TRIM54Q9BYV2 Y_RNA.418-201ENST00000384029 102 ntBASIC2.38□□□□□ -2.03
TRIM54Q9BYV2 MIR144-201ENST00000384886 86 ntBASIC2.38□□□□□ -2.03
TRIM54Q9BYV2 AL359511.1-201ENST00000402970 211 ntBASIC2.38□□□□□ -2.03
TRIM54Q9BYV2 MIR548H3-201ENST00000408771 118 ntBASIC2.38□□□□□ -2.03
TRIM54Q9BYV2 RPL23AP7-203ENST00000449021 469 ntBASIC2.38□□□□□ -2.03
TRIM54Q9BYV2 MIR4672-201ENST00000583126 81 ntBASIC2.38□□□□□ -2.03
TRIM54Q9BYV2 AL353149.1-201ENST00000610667 244 ntBASIC2.38□□□□□ -2.03
TRIM54Q9BYV2 AC245884.12-201ENST00000615364 59 ntBASIC2.38□□□□□ -2.03
TRIM54Q9BYV2 CENPCP1-201ENST00000533085 2578 ntBASIC2.37□□□□□ -2.03
TRIM54Q9BYV2 BX510359.4-201ENST00000423750 193 ntBASIC2.37□□□□□ -2.03
TRIM54Q9BYV2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.37□□□□□ -2.03
TRIM54Q9BYV2 MTCO1P5-201ENST00000433573 344 ntBASIC2.37□□□□□ -2.03
TRIM54Q9BYV2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.37□□□□□ -2.03
TRIM54Q9BYV2 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.37□□□□□ -2.03
TRIM54Q9BYV2 RNA5SP20-201ENST00000515976 84 ntBASIC2.37□□□□□ -2.03
TRIM54Q9BYV2 RNA5SP148-201ENST00000516527 94 ntBASIC2.37□□□□□ -2.03
TRIM54Q9BYV2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.37□□□□□ -2.03
TRIM54Q9BYV2 MIR3169-201ENST00000578032 83 ntBASIC2.37□□□□□ -2.03
TRIM54Q9BYV2 AC012433.1-201ENST00000588916 398 ntBASIC2.37□□□□□ -2.03
TRIM54Q9BYV2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.37□□□□□ -2.03
TRIM54Q9BYV2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.37□□□□□ -2.03
TRIM54Q9BYV2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.37□□□□□ -2.03
TRIM54Q9BYV2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM54Q9BYV2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM54Q9BYV2 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
TRIM54Q9BYV2 Y_RNA.188-201ENST00000363952 111 ntBASIC2.36□□□□□ -2.03
TRIM54Q9BYV2 Y_RNA.352-201ENST00000365439 102 ntBASIC2.36□□□□□ -2.03
TRIM54Q9BYV2 RNU6-417P-201ENST00000384712 107 ntBASIC2.36□□□□□ -2.03
TRIM54Q9BYV2 MIR518A2-201ENST00000384966 87 ntBASIC2.36□□□□□ -2.03
TRIM54Q9BYV2 RNU11-3P-201ENST00000391111 133 ntBASIC2.36□□□□□ -2.03
TRIM54Q9BYV2 RNA5SP465-201ENST00000391195 109 ntBASIC2.36□□□□□ -2.03
TRIM54Q9BYV2 HMGN2P39-201ENST00000398005 273 ntBASIC2.36□□□□□ -2.03
TRIM54Q9BYV2 RNU2-61P-201ENST00000411069 191 ntBASIC2.36□□□□□ -2.03
TRIM54Q9BYV2 RPS26P55-201ENST00000471178 356 ntBASIC2.36□□□□□ -2.03
TRIM54Q9BYV2 YWHAEP4-201ENST00000505390 198 ntBASIC2.36□□□□□ -2.03
TRIM54Q9BYV2 AP005660.1-201ENST00000522972 293 ntBASIC2.36□□□□□ -2.03
TRIM54Q9BYV2 AC006006.1-201ENST00000603082 144 ntBASIC2.36□□□□□ -2.03
TRIM54Q9BYV2 MIR6895-201ENST00000613497 78 ntBASIC2.36□□□□□ -2.03
TRIM54Q9BYV2 U2.14-201ENST00000615943 113 ntBASIC2.36□□□□□ -2.03
TRIM54Q9BYV2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TRIM54Q9BYV2 Y_RNA.124-201ENST00000363339 93 ntBASIC2.35□□□□□ -2.03
TRIM54Q9BYV2 SNORA3A-201ENST00000364113 130 ntBASIC2.35□□□□□ -2.03
TRIM54Q9BYV2 Y_RNA.307-201ENST00000365022 117 ntBASIC2.35□□□□□ -2.03
TRIM54Q9BYV2 Y_RNA.562-201ENST00000384695 113 ntBASIC2.35□□□□□ -2.03
TRIM54Q9BYV2 SNORA11.4-201ENST00000408823 129 ntBASIC2.35□□□□□ -2.03
TRIM54Q9BYV2 RNU6-855P-201ENST00000410395 104 ntBASIC2.35□□□□□ -2.03
TRIM54Q9BYV2 AC108938.1-201ENST00000451204 136 ntBASIC2.35□□□□□ -2.03
TRIM54Q9BYV2 AC010409.1-201ENST00000487382 476 ntBASIC2.35□□□□□ -2.03
TRIM54Q9BYV2 AC091959.1-201ENST00000495857 238 ntBASIC2.35□□□□□ -2.03
TRIM54Q9BYV2 AC009127.3-201ENST00000570531 403 ntBASIC2.35□□□□□ -2.03
TRIM54Q9BYV2 MIR3945-201ENST00000581853 98 ntBASIC2.35□□□□□ -2.03
TRIM54Q9BYV2 MIR4435-1-201ENST00000582552 80 ntBASIC2.35□□□□□ -2.03
TRIM54Q9BYV2 MIR4438-201ENST00000585271 93 ntBASIC2.35□□□□□ -2.03
TRIM54Q9BYV2 AC005786.1-201ENST00000588553 154 ntBASIC2.35□□□□□ -2.03
TRIM54Q9BYV2 MIR1291-201ENST00000627649 87 ntBASIC2.35□□□□□ -2.03
TRIM54Q9BYV2 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.35□□□□□ -2.03
TRIM54Q9BYV2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 Y_RNA.44-201ENST00000362676 108 ntBASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 Y_RNA.478-201ENST00000384358 107 ntBASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 Y_RNA.489-201ENST00000384410 101 ntBASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 MIR515-2-201ENST00000384883 83 ntBASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 MIR515-1-201ENST00000384884 83 ntBASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 HSPE1P13-201ENST00000451143 297 ntBASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 RNU6-191P-201ENST00000516295 94 ntBASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 SNORA31.11-201ENST00000516528 139 ntBASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 RNU6-1271P-201ENST00000517049 105 ntBASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 AC021269.2-201ENST00000532318 330 ntBASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 RPL21P9-201ENST00000556149 474 ntBASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 MIR3162-201ENST00000581818 82 ntBASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 AC007229.1-201ENST00000590455 412 ntBASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 AC067747.1-201ENST00000608026 250 ntBASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 MIR338-201ENST00000636369 67 ntBASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.34□□□□□ -2.03
TRIM54Q9BYV2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
TRIM54Q9BYV2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
TRIM54Q9BYV2 MIR449A-201ENST00000362113 91 ntBASIC2.33□□□□□ -2.04
TRIM54Q9BYV2 RNA5SP432-201ENST00000362480 116 ntBASIC2.33□□□□□ -2.04
TRIM54Q9BYV2 Y_RNA.54-201ENST00000362766 105 ntBASIC2.33□□□□□ -2.04
TRIM54Q9BYV2 Y_RNA.287-201ENST00000364853 94 ntBASIC2.33□□□□□ -2.04
TRIM54Q9BYV2 Y_RNA.447-201ENST00000384184 113 ntBASIC2.33□□□□□ -2.04
TRIM54Q9BYV2 MIR518C-201ENST00000384822 101 ntBASIC2.33□□□□□ -2.04
TRIM54Q9BYV2 MT-TG-201ENST00000387429 68 ntBASIC2.33□□□□□ -2.04
TRIM54Q9BYV2 OOSP1P1-201ENST00000423265 274 ntBASIC2.33□□□□□ -2.04
TRIM54Q9BYV2 CST2P1-201ENST00000425770 87 ntBASIC2.33□□□□□ -2.04
TRIM54Q9BYV2 AC026436.1-201ENST00000510537 270 ntBASIC2.33□□□□□ -2.04
TRIM54Q9BYV2 RNU6-1278P-201ENST00000516130 107 ntBASIC2.33□□□□□ -2.04
TRIM54Q9BYV2 AC110588.1-201ENST00000559699 137 ntBASIC2.33□□□□□ -2.04
TRIM54Q9BYV2 AC007336.1-201ENST00000576365 3828 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms