Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC2.83□□□□□ -1.96
KRTAP3-3Q9BYR6 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
KRTAP3-3Q9BYR6 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
KRTAP3-3Q9BYR6 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
KRTAP3-3Q9BYR6 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
KRTAP3-3Q9BYR6 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
KRTAP3-3Q9BYR6 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC2.82□□□□□ -1.96
KRTAP3-3Q9BYR6 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
KRTAP3-3Q9BYR6 RNA5SP326-201ENST00000363209 110 ntBASIC2.82□□□□□ -1.96
KRTAP3-3Q9BYR6 SNORA5.1-201ENST00000384275 131 ntBASIC2.82□□□□□ -1.96
KRTAP3-3Q9BYR6 MRPS21P8-201ENST00000569196 235 ntBASIC2.82□□□□□ -1.96
KRTAP3-3Q9BYR6 RN7SL753P-201ENST00000581238 290 ntBASIC2.82□□□□□ -1.96
KRTAP3-3Q9BYR6 RN7SL657P-201ENST00000582431 293 ntBASIC2.82□□□□□ -1.96
KRTAP3-3Q9BYR6 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
KRTAP3-3Q9BYR6 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
KRTAP3-3Q9BYR6 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
KRTAP3-3Q9BYR6 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
KRTAP3-3Q9BYR6 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
KRTAP3-3Q9BYR6 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 SNORA15B-2-201ENST00000384058 135 ntBASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 SNORA15B-1-201ENST00000384334 135 ntBASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 RNA5SP296-201ENST00000410523 111 ntBASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 RN7SL552P-201ENST00000462094 276 ntBASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 MIR4490-201ENST00000582647 84 ntBASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 MIR6809-201ENST00000612189 116 ntBASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
KRTAP3-3Q9BYR6 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 SNORA9.1-201ENST00000362412 131 ntBASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 Y_RNA.125-201ENST00000363371 111 ntBASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 SNORA70.6-201ENST00000383934 134 ntBASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 MIR188-201ENST00000385034 86 ntBASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 MIR130A-201ENST00000385274 89 ntBASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 AC108479.1-201ENST00000431142 427 ntBASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 PPIAP32-201ENST00000449940 472 ntBASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 AL139099.4-201ENST00000614802 114 ntBASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 MIR6883-201ENST00000614952 78 ntBASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 MIR6823-201ENST00000622118 61 ntBASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 AL136228.1-201ENST00000622221 319 ntBASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
KRTAP3-3Q9BYR6 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 RNU6-924P-201ENST00000362926 108 ntBASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 RNA5SP344-201ENST00000411081 104 ntBASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 RPS27P29-201ENST00000463110 252 ntBASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 RN7SL323P-201ENST00000494712 295 ntBASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 IGLV3-30-201ENST00000524362 298 ntBASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 AP004607.2-201ENST00000533949 322 ntBASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 AC122688.1-201ENST00000541494 223 ntBASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
KRTAP3-3Q9BYR6 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 AP002512.4-202ENST00000641599 4530 ntBASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
KRTAP3-3Q9BYR6 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms