Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 RNU6-1130P-201ENST00000365434 107 ntBASIC3.13□□□□□ -1.91
LRRC3Q9BY71 SNORA25B-201ENST00000365507 128 ntBASIC3.13□□□□□ -1.91
LRRC3Q9BY71 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRRC3Q9BY71 MIR627-201ENST00000384979 97 ntBASIC3.13□□□□□ -1.91
LRRC3Q9BY71 RNA5SP511-201ENST00000410487 115 ntBASIC3.13□□□□□ -1.91
LRRC3Q9BY71 AC244505.4-201ENST00000434905 287 ntBASIC3.13□□□□□ -1.91
LRRC3Q9BY71 SSXP5-201ENST00000443473 287 ntBASIC3.13□□□□□ -1.91
LRRC3Q9BY71 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRC3Q9BY71 RN7SL20P-201ENST00000488827 297 ntBASIC3.13□□□□□ -1.91
LRRC3Q9BY71 AC097462.1-201ENST00000514125 324 ntBASIC3.13□□□□□ -1.91
LRRC3Q9BY71 RNA5SP356-201ENST00000515972 94 ntBASIC3.13□□□□□ -1.91
LRRC3Q9BY71 RNU6-453P-201ENST00000516819 85 ntBASIC3.13□□□□□ -1.91
LRRC3Q9BY71 AC109810.1-201ENST00000534066 224 ntBASIC3.13□□□□□ -1.91
LRRC3Q9BY71 AC006023.1-201ENST00000603944 259 ntBASIC3.13□□□□□ -1.91
LRRC3Q9BY71 AC007318.2-201ENST00000620999 243 ntBASIC3.13□□□□□ -1.91
LRRC3Q9BY71 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRC3Q9BY71 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRC3Q9BY71 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
LRRC3Q9BY71 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
LRRC3Q9BY71 AC092435.3-201ENST00000565538 3654 ntBASIC3.12□□□□□ -1.91
LRRC3Q9BY71 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.12□□□□□ -1.91
LRRC3Q9BY71 AL157777.2-201ENST00000258070 137 ntBASIC3.12□□□□□ -1.91
LRRC3Q9BY71 RNU4-41P-201ENST00000364426 143 ntBASIC3.12□□□□□ -1.91
LRRC3Q9BY71 MIR613-201ENST00000385248 95 ntBASIC3.12□□□□□ -1.91
LRRC3Q9BY71 RPL21P3-201ENST00000395517 478 ntBASIC3.12□□□□□ -1.91
LRRC3Q9BY71 RNA5SP380-201ENST00000517190 98 ntBASIC3.12□□□□□ -1.91
LRRC3Q9BY71 GTF3AP2-201ENST00000557014 266 ntBASIC3.12□□□□□ -1.91
LRRC3Q9BY71 MIR4431-201ENST00000579990 94 ntBASIC3.12□□□□□ -1.91
LRRC3Q9BY71 MIR4298-201ENST00000584380 73 ntBASIC3.12□□□□□ -1.91
LRRC3Q9BY71 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.12□□□□□ -1.91
LRRC3Q9BY71 RPL12P50-201ENST00000603116 116 ntBASIC3.12□□□□□ -1.91
LRRC3Q9BY71 AP001485.1-201ENST00000604799 199 ntBASIC3.12□□□□□ -1.91
LRRC3Q9BY71 AC132825.6-201ENST00000638861 357 ntBASIC3.12□□□□□ -1.91
LRRC3Q9BY71 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LRRC3Q9BY71 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LRRC3Q9BY71 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.12□□□□□ -1.91
LRRC3Q9BY71 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LRRC3Q9BY71 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRC3Q9BY71 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
LRRC3Q9BY71 RNU1-22P-201ENST00000363334 158 ntBASIC3.11□□□□□ -1.91
LRRC3Q9BY71 Y_RNA.343-201ENST00000365354 112 ntBASIC3.11□□□□□ -1.91
LRRC3Q9BY71 RNU6-728P-201ENST00000365375 104 ntBASIC3.11□□□□□ -1.91
LRRC3Q9BY71 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.11□□□□□ -1.91
LRRC3Q9BY71 RNU6-239P-201ENST00000390990 99 ntBASIC3.11□□□□□ -1.91
LRRC3Q9BY71 Y_RNA.580-201ENST00000391004 95 ntBASIC3.11□□□□□ -1.91
LRRC3Q9BY71 AL512604.1-201ENST00000404812 257 ntBASIC3.11□□□□□ -1.91
LRRC3Q9BY71 AL606845.1-201ENST00000404881 255 ntBASIC3.11□□□□□ -1.91
LRRC3Q9BY71 SRIP3-201ENST00000413200 219 ntBASIC3.11□□□□□ -1.91
LRRC3Q9BY71 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRC3Q9BY71 AL162725.1-201ENST00000435405 301 ntBASIC3.11□□□□□ -1.91
LRRC3Q9BY71 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRC3Q9BY71 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRC3Q9BY71 RNA5SP367-201ENST00000516557 118 ntBASIC3.11□□□□□ -1.91
LRRC3Q9BY71 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRC3Q9BY71 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRC3Q9BY71 AC015720.1-201ENST00000565251 277 ntBASIC3.11□□□□□ -1.91
LRRC3Q9BY71 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LRRC3Q9BY71 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
LRRC3Q9BY71 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
LRRC3Q9BY71 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRRC3Q9BY71 AC096644.4-201ENST00000563417 2912 ntBASIC3.1□□□□□ -1.91
LRRC3Q9BY71 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
LRRC3Q9BY71 AP006437.1-201ENST00000641440 3685 ntBASIC3.1□□□□□ -1.91
LRRC3Q9BY71 MIR15B-201ENST00000385045 98 ntBASIC3.1□□□□□ -1.91
LRRC3Q9BY71 MT-TT-201ENST00000387460 66 ntBASIC3.1□□□□□ -1.91
LRRC3Q9BY71 RNU6-1228P-201ENST00000391014 107 ntBASIC3.1□□□□□ -1.91
LRRC3Q9BY71 RNU6-1186P-201ENST00000410429 97 ntBASIC3.1□□□□□ -1.91
LRRC3Q9BY71 RNU2-48P-201ENST00000410694 191 ntBASIC3.1□□□□□ -1.91
LRRC3Q9BY71 AC006461.1-201ENST00000412637 326 ntBASIC3.1□□□□□ -1.91
LRRC3Q9BY71 RPS15AP28-201ENST00000435088 386 ntBASIC3.1□□□□□ -1.91
LRRC3Q9BY71 Z96811.1-201ENST00000445880 108 ntBASIC3.1□□□□□ -1.91
LRRC3Q9BY71 SCARNA8-201ENST00000515924 131 ntBASIC3.1□□□□□ -1.91
LRRC3Q9BY71 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRC3Q9BY71 AC090616.3-201ENST00000582184 217 ntBASIC3.1□□□□□ -1.91
LRRC3Q9BY71 ELOCP29-201ENST00000588193 334 ntBASIC3.1□□□□□ -1.91
LRRC3Q9BY71 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
LRRC3Q9BY71 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRC3Q9BY71 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LRRC3Q9BY71 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
LRRC3Q9BY71 RNU6-151P-201ENST00000364158 107 ntBASIC3.09□□□□□ -1.91
LRRC3Q9BY71 RNU6-1180P-201ENST00000364935 107 ntBASIC3.09□□□□□ -1.91
LRRC3Q9BY71 SNORA72-201ENST00000384339 132 ntBASIC3.09□□□□□ -1.91
LRRC3Q9BY71 RNU11-5P-201ENST00000391216 129 ntBASIC3.09□□□□□ -1.91
LRRC3Q9BY71 AC022018.1-201ENST00000430685 241 ntBASIC3.09□□□□□ -1.91
LRRC3Q9BY71 UQCRHP3-201ENST00000451503 251 ntBASIC3.09□□□□□ -1.91
LRRC3Q9BY71 AC018868.1-201ENST00000491307 315 ntBASIC3.09□□□□□ -1.91
LRRC3Q9BY71 AC011406.1-201ENST00000512440 370 ntBASIC3.09□□□□□ -1.91
LRRC3Q9BY71 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LRRC3Q9BY71 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LRRC3Q9BY71 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LRRC3Q9BY71 snoU2-30.2-201ENST00000362805 70 ntBASIC3.08□□□□□ -1.92
LRRC3Q9BY71 Y_RNA.99-201ENST00000363138 105 ntBASIC3.08□□□□□ -1.92
LRRC3Q9BY71 RNU6-117P-201ENST00000365415 107 ntBASIC3.08□□□□□ -1.92
LRRC3Q9BY71 Y_RNA.488-201ENST00000384403 102 ntBASIC3.08□□□□□ -1.92
LRRC3Q9BY71 RNU6-851P-201ENST00000384565 107 ntBASIC3.08□□□□□ -1.92
LRRC3Q9BY71 RNU6-160P-201ENST00000384591 107 ntBASIC3.08□□□□□ -1.92
LRRC3Q9BY71 RNU6-417P-201ENST00000384712 107 ntBASIC3.08□□□□□ -1.92
LRRC3Q9BY71 SNORA46-201ENST00000384762 135 ntBASIC3.08□□□□□ -1.92
LRRC3Q9BY71 SNORA79-201ENST00000408376 140 ntBASIC3.08□□□□□ -1.92
LRRC3Q9BY71 AC060773.1-201ENST00000421698 310 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms