Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC104332.2-201ENST00000429959 156 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 AL121890.1-201ENST00000435457 205 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.64□□□□□ -1.99
NDC1Q9BTX1 TMSB4XP3-201ENST00000445144 114 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 AC016925.1-201ENST00000458303 298 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.64□□□□□ -1.99
NDC1Q9BTX1 RNA5SP490-201ENST00000517141 136 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 AC004832.4-201ENST00000608952 331 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 AC090115.4-201ENST00000609970 188 ntBASIC2.64□□□□□ -1.99
NDC1Q9BTX1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NDC1Q9BTX1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.64□□□□□ -1.99
NDC1Q9BTX1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.64□□□□□ -1.99
NDC1Q9BTX1 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
NDC1Q9BTX1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
NDC1Q9BTX1 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
NDC1Q9BTX1 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NDC1Q9BTX1 MIR26A1-201ENST00000362205 77 ntBASIC2.63□□□□□ -1.99
NDC1Q9BTX1 SNORD114-7-201ENST00000362520 77 ntBASIC2.63□□□□□ -1.99
NDC1Q9BTX1 RNU6-743P-201ENST00000364151 106 ntBASIC2.63□□□□□ -1.99
NDC1Q9BTX1 snoU2_19.4-201ENST00000364329 80 ntBASIC2.63□□□□□ -1.99
NDC1Q9BTX1 RNA5SP126-201ENST00000365092 109 ntBASIC2.63□□□□□ -1.99
NDC1Q9BTX1 SNORD116-18-201ENST00000383961 92 ntBASIC2.63□□□□□ -1.99
NDC1Q9BTX1 MIR627-201ENST00000384979 97 ntBASIC2.63□□□□□ -1.99
NDC1Q9BTX1 Y_RNA.580-201ENST00000391004 95 ntBASIC2.63□□□□□ -1.99
NDC1Q9BTX1 RNU6-57P-201ENST00000411348 103 ntBASIC2.63□□□□□ -1.99
NDC1Q9BTX1 AC003685.2-201ENST00000422795 395 ntBASIC2.63□□□□□ -1.99
NDC1Q9BTX1 SEPT7P4-201ENST00000437076 306 ntBASIC2.63□□□□□ -1.99
NDC1Q9BTX1 RPL23AP7-203ENST00000449021 469 ntBASIC2.63□□□□□ -1.99
NDC1Q9BTX1 SNORD65B-201ENST00000459126 73 ntBASIC2.63□□□□□ -1.99
NDC1Q9BTX1 Y_RNA.797-201ENST00000515977 94 ntBASIC2.63□□□□□ -1.99
NDC1Q9BTX1 RNU6-948P-201ENST00000516374 107 ntBASIC2.63□□□□□ -1.99
NDC1Q9BTX1 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.63□□□□□ -1.99
NDC1Q9BTX1 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.63□□□□□ -1.99
NDC1Q9BTX1 Y_RNA.802-201ENST00000614892 130 ntBASIC2.63□□□□□ -1.99
NDC1Q9BTX1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
NDC1Q9BTX1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NDC1Q9BTX1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.63□□□□□ -1.99
NDC1Q9BTX1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
NDC1Q9BTX1 AL161431.1-201ENST00000618966 4205 ntBASIC2.63□□□□□ -1.99
NDC1Q9BTX1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
NDC1Q9BTX1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NDC1Q9BTX1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.62□□□□□ -1.99
NDC1Q9BTX1 AC062016.1-201ENST00000355719 319 ntBASIC2.62□□□□□ -1.99
NDC1Q9BTX1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
NDC1Q9BTX1 Y_RNA.24-201ENST00000362508 103 ntBASIC2.62□□□□□ -1.99
NDC1Q9BTX1 RNU6-1205P-201ENST00000363625 106 ntBASIC2.62□□□□□ -1.99
NDC1Q9BTX1 RNU6-704P-201ENST00000364162 103 ntBASIC2.62□□□□□ -1.99
NDC1Q9BTX1 MIR196B-201ENST00000384852 84 ntBASIC2.62□□□□□ -1.99
NDC1Q9BTX1 MIR9-1-201ENST00000385198 89 ntBASIC2.62□□□□□ -1.99
NDC1Q9BTX1 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
NDC1Q9BTX1 MIR873-201ENST00000401120 77 ntBASIC2.62□□□□□ -1.99
NDC1Q9BTX1 RNA5SP21-201ENST00000410917 96 ntBASIC2.62□□□□□ -1.99
NDC1Q9BTX1 AL606753.1-201ENST00000427435 87 ntBASIC2.62□□□□□ -1.99
NDC1Q9BTX1 RPS29P6-201ENST00000438196 145 ntBASIC2.62□□□□□ -1.99
NDC1Q9BTX1 AL445687.1-201ENST00000439946 251 ntBASIC2.62□□□□□ -1.99
NDC1Q9BTX1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.62□□□□□ -1.99
NDC1Q9BTX1 RNU6-221P-201ENST00000459541 99 ntBASIC2.62□□□□□ -1.99
NDC1Q9BTX1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.62□□□□□ -1.99
NDC1Q9BTX1 RN7SKP164-201ENST00000516138 266 ntBASIC2.62□□□□□ -1.99
NDC1Q9BTX1 RNU6-1337P-201ENST00000516525 95 ntBASIC2.62□□□□□ -1.99
NDC1Q9BTX1 AL449363.1-201ENST00000617815 186 ntBASIC2.62□□□□□ -1.99
NDC1Q9BTX1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.62□□□□□ -1.99
NDC1Q9BTX1 AC009487.4-201ENST00000624969 3585 ntBASIC2.62□□□□□ -1.99
NDC1Q9BTX1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
NDC1Q9BTX1 SNORA27.1-201ENST00000362604 124 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 RNU6-859P-201ENST00000362728 107 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 RNU4-84P-201ENST00000364200 139 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 RNU6-275P-201ENST00000364910 107 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 U8.7-201ENST00000364940 136 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 Y_RNA.357-201ENST00000365487 109 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 RNU6-418P-201ENST00000384035 107 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 AL590004.2-201ENST00000404787 371 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.61□□□□□ -1.99
NDC1Q9BTX1 HSPE1P21-201ENST00000438283 308 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 AC108938.1-201ENST00000451204 136 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 AL109933.2-201ENST00000452651 260 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 SNORD109B-201ENST00000458961 67 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 SNORD109A-201ENST00000459128 67 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 AC010598.1-201ENST00000510378 103 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 RNU2-34P-201ENST00000516534 121 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 AC027419.1-201ENST00000522976 328 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.61□□□□□ -1.99
NDC1Q9BTX1 AC007536.1-201ENST00000533382 349 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 AC079600.2-201ENST00000550076 130 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 MIR4744-201ENST00000581563 82 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 AC004832.5-201ENST00000608677 401 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 MTND1P7-201ENST00000632801 297 ntBASIC2.61□□□□□ -1.99
NDC1Q9BTX1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.61□□□□□ -1.99
NDC1Q9BTX1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.61□□□□□ -1.99
NDC1Q9BTX1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
NDC1Q9BTX1 RNU6-103P-201ENST00000363686 107 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 RNA5SP125-201ENST00000364843 120 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 SNORD50.2-201ENST00000365465 70 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
NDC1Q9BTX1 RNU6-969P-201ENST00000383900 105 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 RNU6-449P-201ENST00000383914 107 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 RNU6-1235P-201ENST00000384559 107 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 MIR181A2-201ENST00000384863 110 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 RNU6-578P-201ENST00000390980 103 ntBASIC2.6□□□□□ -1.99
NDC1Q9BTX1 Z96811.1-201ENST00000445880 108 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms