Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 Y_RNA.714-201ENST00000517065 90 ntBASIC3.15□□□□□ -1.91
CITED4Q96RK1 RNU6-365P-201ENST00000517113 106 ntBASIC3.15□□□□□ -1.91
CITED4Q96RK1 AC024995.1-201ENST00000523014 93 ntBASIC3.15□□□□□ -1.91
CITED4Q96RK1 MIR3169-201ENST00000578032 83 ntBASIC3.15□□□□□ -1.91
CITED4Q96RK1 MIR4662B-201ENST00000579498 81 ntBASIC3.15□□□□□ -1.91
CITED4Q96RK1 RN7SL600P-201ENST00000581811 299 ntBASIC3.15□□□□□ -1.91
CITED4Q96RK1 MIR6867-201ENST00000610636 67 ntBASIC3.15□□□□□ -1.91
CITED4Q96RK1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.15□□□□□ -1.91
CITED4Q96RK1 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CITED4Q96RK1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CITED4Q96RK1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.14□□□□□ -1.91
CITED4Q96RK1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.14□□□□□ -1.91
CITED4Q96RK1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CITED4Q96RK1 SNORA1B-201ENST00000362535 133 ntBASIC3.14□□□□□ -1.91
CITED4Q96RK1 SNORD68-201ENST00000363214 84 ntBASIC3.14□□□□□ -1.91
CITED4Q96RK1 Y_RNA.486-201ENST00000384398 107 ntBASIC3.14□□□□□ -1.91
CITED4Q96RK1 MIR802-201ENST00000390235 94 ntBASIC3.14□□□□□ -1.91
CITED4Q96RK1 RNA5SP385-201ENST00000515947 110 ntBASIC3.14□□□□□ -1.91
CITED4Q96RK1 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.14□□□□□ -1.91
CITED4Q96RK1 AP002004.2-201ENST00000531656 154 ntBASIC3.14□□□□□ -1.91
CITED4Q96RK1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.14□□□□□ -1.91
CITED4Q96RK1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.14□□□□□ -1.91
CITED4Q96RK1 MIR6875-201ENST00000617506 72 ntBASIC3.14□□□□□ -1.91
CITED4Q96RK1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CITED4Q96RK1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CITED4Q96RK1 AL161912.2-201ENST00000565707 3007 ntBASIC3.13□□□□□ -1.91
CITED4Q96RK1 RNA5SP383-201ENST00000362934 120 ntBASIC3.13□□□□□ -1.91
CITED4Q96RK1 RNY1P11-201ENST00000363759 113 ntBASIC3.13□□□□□ -1.91
CITED4Q96RK1 SNORD46.1-201ENST00000364139 104 ntBASIC3.13□□□□□ -1.91
CITED4Q96RK1 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.13□□□□□ -1.91
CITED4Q96RK1 AC008267.6-201ENST00000441664 139 ntBASIC3.13□□□□□ -1.91
CITED4Q96RK1 NDUFA4P2-201ENST00000489989 244 ntBASIC3.13□□□□□ -1.91
CITED4Q96RK1 RPL29P14-201ENST00000495837 428 ntBASIC3.13□□□□□ -1.91
CITED4Q96RK1 RNU6-479P-201ENST00000516348 105 ntBASIC3.13□□□□□ -1.91
CITED4Q96RK1 RNU6-126P-201ENST00000516685 103 ntBASIC3.13□□□□□ -1.91
CITED4Q96RK1 RNU6-1234P-201ENST00000516877 103 ntBASIC3.13□□□□□ -1.91
CITED4Q96RK1 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.13□□□□□ -1.91
CITED4Q96RK1 AL160236.1-201ENST00000556317 195 ntBASIC3.13□□□□□ -1.91
CITED4Q96RK1 MIR4506-201ENST00000584693 77 ntBASIC3.13□□□□□ -1.91
CITED4Q96RK1 AL591926.4-201ENST00000616895 298 ntBASIC3.13□□□□□ -1.91
CITED4Q96RK1 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.13□□□□□ -1.91
CITED4Q96RK1 AL356274.2-201ENST00000624379 3752 ntBASIC3.13□□□□□ -1.91
CITED4Q96RK1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CITED4Q96RK1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CITED4Q96RK1 RNU6-978P-201ENST00000364371 103 ntBASIC3.12□□□□□ -1.91
CITED4Q96RK1 RNU6-1138P-201ENST00000365359 106 ntBASIC3.12□□□□□ -1.91
CITED4Q96RK1 SNORA22C-201ENST00000384614 134 ntBASIC3.12□□□□□ -1.91
CITED4Q96RK1 MIR29C-201ENST00000385231 88 ntBASIC3.12□□□□□ -1.91
CITED4Q96RK1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CITED4Q96RK1 BX510359.4-201ENST00000423750 193 ntBASIC3.12□□□□□ -1.91
CITED4Q96RK1 AC006989.1-201ENST00000427212 131 ntBASIC3.12□□□□□ -1.91
CITED4Q96RK1 RPL23AP83-201ENST00000434984 473 ntBASIC3.12□□□□□ -1.91
CITED4Q96RK1 NDUFB1P1-201ENST00000435191 180 ntBASIC3.12□□□□□ -1.91
CITED4Q96RK1 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.12□□□□□ -1.91
CITED4Q96RK1 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.12□□□□□ -1.91
CITED4Q96RK1 AC096725.1-201ENST00000514266 313 ntBASIC3.12□□□□□ -1.91
CITED4Q96RK1 AC099522.1-202ENST00000514718 367 ntBASIC3.12□□□□□ -1.91
CITED4Q96RK1 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.12□□□□□ -1.91
CITED4Q96RK1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CITED4Q96RK1 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CITED4Q96RK1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.12□□□□□ -1.91
CITED4Q96RK1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CITED4Q96RK1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CITED4Q96RK1 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CITED4Q96RK1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CITED4Q96RK1 RNU1-58P-201ENST00000362413 163 ntBASIC3.11□□□□□ -1.91
CITED4Q96RK1 SNORD56.3-201ENST00000363507 71 ntBASIC3.11□□□□□ -1.91
CITED4Q96RK1 RNU6-915P-201ENST00000364943 103 ntBASIC3.11□□□□□ -1.91
CITED4Q96RK1 MIR449B-201ENST00000384995 97 ntBASIC3.11□□□□□ -1.91
CITED4Q96RK1 RNU6-1168P-201ENST00000390831 104 ntBASIC3.11□□□□□ -1.91
CITED4Q96RK1 RNU11-3P-201ENST00000391111 133 ntBASIC3.11□□□□□ -1.91
CITED4Q96RK1 RPL21P65-201ENST00000406094 466 ntBASIC3.11□□□□□ -1.91
CITED4Q96RK1 AC099677.2-201ENST00000436385 175 ntBASIC3.11□□□□□ -1.91
CITED4Q96RK1 HMGN1P18-201ENST00000457642 277 ntBASIC3.11□□□□□ -1.91
CITED4Q96RK1 RN7SL594P-201ENST00000470590 287 ntBASIC3.11□□□□□ -1.91
CITED4Q96RK1 MRPS17P9-201ENST00000511924 393 ntBASIC3.11□□□□□ -1.91
CITED4Q96RK1 SNORA18.4-201ENST00000516440 124 ntBASIC3.11□□□□□ -1.91
CITED4Q96RK1 SNORA31.26-201ENST00000517250 137 ntBASIC3.11□□□□□ -1.91
CITED4Q96RK1 AL358944.1-201ENST00000528537 144 ntBASIC3.11□□□□□ -1.91
CITED4Q96RK1 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.11□□□□□ -1.91
CITED4Q96RK1 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
CITED4Q96RK1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CITED4Q96RK1 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.11□□□□□ -1.91
CITED4Q96RK1 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
CITED4Q96RK1 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.1□□□□□ -1.91
CITED4Q96RK1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CITED4Q96RK1 RNU6-1084P-201ENST00000362498 107 ntBASIC3.1□□□□□ -1.91
CITED4Q96RK1 Y_RNA.71-201ENST00000362892 104 ntBASIC3.1□□□□□ -1.91
CITED4Q96RK1 RNU6-1290P-201ENST00000362957 109 ntBASIC3.1□□□□□ -1.91
CITED4Q96RK1 RNA5SP130-201ENST00000364431 114 ntBASIC3.1□□□□□ -1.91
CITED4Q96RK1 Y_RNA.265-201ENST00000364677 108 ntBASIC3.1□□□□□ -1.91
CITED4Q96RK1 RNU1-148P-201ENST00000384472 162 ntBASIC3.1□□□□□ -1.91
CITED4Q96RK1 AC093578.1-201ENST00000415219 368 ntBASIC3.1□□□□□ -1.91
CITED4Q96RK1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.1□□□□□ -1.91
CITED4Q96RK1 AL133547.1-201ENST00000448546 220 ntBASIC3.1□□□□□ -1.91
CITED4Q96RK1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.1□□□□□ -1.91
CITED4Q96RK1 RPS26P45-201ENST00000471748 340 ntBASIC3.1□□□□□ -1.91
CITED4Q96RK1 SCGB1D5P-201ENST00000515134 247 ntBASIC3.1□□□□□ -1.91
CITED4Q96RK1 RNU6-504P-201ENST00000516568 104 ntBASIC3.1□□□□□ -1.91
CITED4Q96RK1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms