Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CCDC138Q96M89 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
CCDC138Q96M89 Y_RNA.143-201ENST00000363520 106 ntBASIC2.19□□□□□ -2.06
CCDC138Q96M89 SNORD115-30-201ENST00000364117 82 ntBASIC2.19□□□□□ -2.06
CCDC138Q96M89 RNU6-407P-201ENST00000365280 104 ntBASIC2.19□□□□□ -2.06
CCDC138Q96M89 RNU6-639P-201ENST00000384074 107 ntBASIC2.19□□□□□ -2.06
CCDC138Q96M89 Y_RNA.455-201ENST00000384230 98 ntBASIC2.19□□□□□ -2.06
CCDC138Q96M89 SNORD63-201ENST00000384262 68 ntBASIC2.19□□□□□ -2.06
CCDC138Q96M89 RNU6-296P-201ENST00000384608 107 ntBASIC2.19□□□□□ -2.06
CCDC138Q96M89 Y_RNA.570-201ENST00000384750 101 ntBASIC2.19□□□□□ -2.06
CCDC138Q96M89 RNU2-7P-201ENST00000410794 178 ntBASIC2.19□□□□□ -2.06
CCDC138Q96M89 RNU2-40P-201ENST00000410833 196 ntBASIC2.19□□□□□ -2.06
CCDC138Q96M89 AL163195.1-201ENST00000496941 348 ntBASIC2.19□□□□□ -2.06
CCDC138Q96M89 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC138Q96M89 RNU6-155P-201ENST00000516347 100 ntBASIC2.19□□□□□ -2.06
CCDC138Q96M89 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC138Q96M89 MIR4680-201ENST00000580906 66 ntBASIC2.19□□□□□ -2.06
CCDC138Q96M89 U6.108-201ENST00000637764 58 ntBASIC2.19□□□□□ -2.06
CCDC138Q96M89 AP000553.5-201ENST00000641933 54 ntBASIC2.19□□□□□ -2.06
CCDC138Q96M89 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC138Q96M89 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CCDC138Q96M89 U8.2-201ENST00000363156 134 ntBASIC2.18□□□□□ -2.06
CCDC138Q96M89 SNORA63D-201ENST00000364359 132 ntBASIC2.18□□□□□ -2.06
CCDC138Q96M89 Y_RNA.238-201ENST00000364441 102 ntBASIC2.18□□□□□ -2.06
CCDC138Q96M89 Y_RNA.422-201ENST00000384054 114 ntBASIC2.18□□□□□ -2.06
CCDC138Q96M89 Y_RNA.527-201ENST00000384573 102 ntBASIC2.18□□□□□ -2.06
CCDC138Q96M89 RNU4-53P-201ENST00000410828 140 ntBASIC2.18□□□□□ -2.06
CCDC138Q96M89 RNU6-130P-201ENST00000411112 103 ntBASIC2.18□□□□□ -2.06
CCDC138Q96M89 RNU6-1199P-201ENST00000411249 104 ntBASIC2.18□□□□□ -2.06
CCDC138Q96M89 RPL23AP36-201ENST00000413895 458 ntBASIC2.18□□□□□ -2.06
CCDC138Q96M89 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC138Q96M89 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC138Q96M89 AC010154.1-201ENST00000425857 269 ntBASIC2.18□□□□□ -2.06
CCDC138Q96M89 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC138Q96M89 AC104435.1-201ENST00000483483 166 ntBASIC2.18□□□□□ -2.06
CCDC138Q96M89 MRPS17P9-201ENST00000511924 393 ntBASIC2.18□□□□□ -2.06
CCDC138Q96M89 SNORA70.12-201ENST00000516084 153 ntBASIC2.18□□□□□ -2.06
CCDC138Q96M89 AP003072.1-201ENST00000531740 145 ntBASIC2.18□□□□□ -2.06
CCDC138Q96M89 AC022254.1-201ENST00000567857 235 ntBASIC2.18□□□□□ -2.06
CCDC138Q96M89 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC138Q96M89 MIR4713-201ENST00000582691 75 ntBASIC2.18□□□□□ -2.06
CCDC138Q96M89 AC011373.1-201ENST00000607270 237 ntBASIC2.18□□□□□ -2.06
CCDC138Q96M89 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC138Q96M89 SNORA63-201ENST00000363450 132 ntBASIC2.17□□□□□ -2.06
CCDC138Q96M89 MIR221-201ENST00000385135 110 ntBASIC2.17□□□□□ -2.06
CCDC138Q96M89 AC005042.3-201ENST00000453230 174 ntBASIC2.17□□□□□ -2.06
CCDC138Q96M89 AC097462.1-201ENST00000514125 324 ntBASIC2.17□□□□□ -2.06
CCDC138Q96M89 RNA5SP200-201ENST00000516360 103 ntBASIC2.17□□□□□ -2.06
CCDC138Q96M89 SNORA31.17-201ENST00000516953 127 ntBASIC2.17□□□□□ -2.06
CCDC138Q96M89 RNU7-172P-201ENST00000517125 64 ntBASIC2.17□□□□□ -2.06
CCDC138Q96M89 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC138Q96M89 DEFB122-202ENST00000569013 197 ntBASIC2.17□□□□□ -2.06
CCDC138Q96M89 AC009831.4-201ENST00000620744 325 ntBASIC2.17□□□□□ -2.06
CCDC138Q96M89 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC138Q96M89 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC138Q96M89 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC138Q96M89 RNU1-22P-201ENST00000363334 158 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 Y_RNA.183-201ENST00000363882 113 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 Y_RNA.361-201ENST00000365515 120 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 RNU6-937P-201ENST00000384325 106 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CCDC138Q96M89 SNORA48.3-201ENST00000391081 134 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 RNU11-5P-201ENST00000391216 129 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 AL031003.1-201ENST00000404229 172 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 AL078595.1-201ENST00000404458 226 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 SNORA3.2-201ENST00000408221 125 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 Z98742.3-201ENST00000418637 326 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC138Q96M89 RPL23AP7-203ENST00000449021 469 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 RPS26P45-201ENST00000471748 340 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 RNU6-397P-201ENST00000516226 104 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 RNA5SP481-201ENST00000516814 122 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 RNU7-110P-201ENST00000516891 62 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 RNU7-128P-201ENST00000517247 62 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 AC002984.1-201ENST00000591692 448 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 AL590808.1-201ENST00000618696 141 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 MIR6132-201ENST00000622083 109 ntBASIC2.16□□□□□ -2.06
CCDC138Q96M89 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.15□□□□□ -2.06
CCDC138Q96M89 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
CCDC138Q96M89 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.06
CCDC138Q96M89 RNU6-324P-201ENST00000363957 106 ntBASIC2.15□□□□□ -2.07
CCDC138Q96M89 RNU6-482P-201ENST00000391068 107 ntBASIC2.15□□□□□ -2.07
CCDC138Q96M89 RNU2-20P-201ENST00000410425 191 ntBASIC2.15□□□□□ -2.07
CCDC138Q96M89 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.15□□□□□ -2.07
CCDC138Q96M89 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC138Q96M89 RPS26P55-201ENST00000471178 356 ntBASIC2.15□□□□□ -2.07
CCDC138Q96M89 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC138Q96M89 AC108210.2-201ENST00000503681 201 ntBASIC2.15□□□□□ -2.07
CCDC138Q96M89 RNU6-764P-201ENST00000516396 105 ntBASIC2.15□□□□□ -2.07
CCDC138Q96M89 RNU6-897P-201ENST00000517135 105 ntBASIC2.15□□□□□ -2.07
CCDC138Q96M89 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC138Q96M89 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.15□□□□□ -2.07
CCDC138Q96M89 RPL21P9-201ENST00000556149 474 ntBASIC2.15□□□□□ -2.07
CCDC138Q96M89 AC113195.1-201ENST00000579952 141 ntBASIC2.15□□□□□ -2.07
CCDC138Q96M89 AL096840.1-201ENST00000603287 93 ntBASIC2.15□□□□□ -2.07
CCDC138Q96M89 AL355297.3-201ENST00000604082 446 ntBASIC2.15□□□□□ -2.07
CCDC138Q96M89 RAC1P9-201ENST00000604990 392 ntBASIC2.15□□□□□ -2.07
CCDC138Q96M89 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC138Q96M89 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC138Q96M89 Y_RNA.124-201ENST00000363339 93 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms