Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 HSPE1P7-201ENST00000604681 321 ntBASIC4.08□□□□□ -1.76
TRIM47Q96LD4 AL162274.2-201ENST00000614406 332 ntBASIC4.08□□□□□ -1.76
TRIM47Q96LD4 U4.6-201ENST00000621618 127 ntBASIC4.08□□□□□ -1.76
TRIM47Q96LD4 AC006386.2-201ENST00000624491 75 ntBASIC4.08□□□□□ -1.76
TRIM47Q96LD4 AC012005.1-201ENST00000624575 75 ntBASIC4.08□□□□□ -1.76
TRIM47Q96LD4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM47Q96LD4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM47Q96LD4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM47Q96LD4 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TRIM47Q96LD4 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM47Q96LD4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM47Q96LD4 AP001486.2-201ENST00000561652 5113 ntBASIC4.07□□□□□ -1.76
TRIM47Q96LD4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM47Q96LD4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM47Q96LD4 SNORA33-201ENST00000363664 130 ntBASIC4.07□□□□□ -1.76
TRIM47Q96LD4 Y_RNA.190-201ENST00000363964 101 ntBASIC4.07□□□□□ -1.76
TRIM47Q96LD4 Y_RNA.298-201ENST00000364960 107 ntBASIC4.07□□□□□ -1.76
TRIM47Q96LD4 Y_RNA.565-201ENST00000384719 101 ntBASIC4.07□□□□□ -1.76
TRIM47Q96LD4 MIR607-201ENST00000385241 96 ntBASIC4.07□□□□□ -1.76
TRIM47Q96LD4 AL139095.1-201ENST00000404326 391 ntBASIC4.07□□□□□ -1.76
TRIM47Q96LD4 AC145146.1-201ENST00000496370 254 ntBASIC4.07□□□□□ -1.76
TRIM47Q96LD4 RNA5SP20-201ENST00000515976 84 ntBASIC4.07□□□□□ -1.76
TRIM47Q96LD4 RNU2-58P-201ENST00000516403 183 ntBASIC4.07□□□□□ -1.76
TRIM47Q96LD4 AC027419.1-201ENST00000522976 328 ntBASIC4.07□□□□□ -1.76
TRIM47Q96LD4 MIR3163-201ENST00000581592 73 ntBASIC4.07□□□□□ -1.76
TRIM47Q96LD4 AC021443.1-201ENST00000604478 211 ntBASIC4.07□□□□□ -1.76
TRIM47Q96LD4 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.07□□□□□ -1.76
TRIM47Q96LD4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM47Q96LD4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.07□□□□□ -1.76
TRIM47Q96LD4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TRIM47Q96LD4 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
TRIM47Q96LD4 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM47Q96LD4 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
TRIM47Q96LD4 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM47Q96LD4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM47Q96LD4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TRIM47Q96LD4 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
TRIM47Q96LD4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.06□□□□□ -1.76
TRIM47Q96LD4 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.06□□□□□ -1.76
TRIM47Q96LD4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TRIM47Q96LD4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
TRIM47Q96LD4 SNORD61-201ENST00000384252 73 ntBASIC4.06□□□□□ -1.76
TRIM47Q96LD4 RNU6-1104P-201ENST00000384723 104 ntBASIC4.06□□□□□ -1.76
TRIM47Q96LD4 RNA5SP354-201ENST00000391247 136 ntBASIC4.06□□□□□ -1.76
TRIM47Q96LD4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.06□□□□□ -1.76
TRIM47Q96LD4 AC107934.2-201ENST00000518653 310 ntBASIC4.06□□□□□ -1.76
TRIM47Q96LD4 MIR548Z-201ENST00000584743 97 ntBASIC4.06□□□□□ -1.76
TRIM47Q96LD4 AL353746.1-201ENST00000566293 6881 ntBASIC4.06□□□□□ -1.76
TRIM47Q96LD4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.06□□□□□ -1.76
TRIM47Q96LD4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM47Q96LD4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
TRIM47Q96LD4 AC017071.1-201ENST00000564407 2204 ntBASIC4.06□□□□□ -1.76
TRIM47Q96LD4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
TRIM47Q96LD4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
TRIM47Q96LD4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.05□□□□□ -1.76
TRIM47Q96LD4 USP8P1-201ENST00000494673 3183 ntBASIC4.05□□□□□ -1.76
TRIM47Q96LD4 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM47Q96LD4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.05□□□□□ -1.76
TRIM47Q96LD4 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRIM47Q96LD4 RNU6-944P-201ENST00000364023 107 ntBASIC4.05□□□□□ -1.76
TRIM47Q96LD4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TRIM47Q96LD4 SNORD77.3-201ENST00000391113 65 ntBASIC4.05□□□□□ -1.76
TRIM47Q96LD4 RNU2-37P-201ENST00000410695 177 ntBASIC4.05□□□□□ -1.76
TRIM47Q96LD4 RPS29P31-201ENST00000446147 164 ntBASIC4.05□□□□□ -1.76
TRIM47Q96LD4 HMGN2P10-201ENST00000448085 265 ntBASIC4.05□□□□□ -1.76
TRIM47Q96LD4 SNORD65B-201ENST00000459126 73 ntBASIC4.05□□□□□ -1.76
TRIM47Q96LD4 RN7SL429P-201ENST00000479090 223 ntBASIC4.05□□□□□ -1.76
TRIM47Q96LD4 RN7SL489P-201ENST00000486185 223 ntBASIC4.05□□□□□ -1.76
TRIM47Q96LD4 RN7SL327P-201ENST00000488659 223 ntBASIC4.05□□□□□ -1.76
TRIM47Q96LD4 AC010598.1-201ENST00000510378 103 ntBASIC4.05□□□□□ -1.76
TRIM47Q96LD4 IGKV2-26-201ENST00000518305 343 ntBASIC4.05□□□□□ -1.76
TRIM47Q96LD4 AC022523.2-201ENST00000561045 150 ntBASIC4.05□□□□□ -1.76
TRIM47Q96LD4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM47Q96LD4 RN7SL853P-201ENST00000617250 223 ntBASIC4.05□□□□□ -1.76
TRIM47Q96LD4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.05□□□□□ -1.76
TRIM47Q96LD4 AC006160.2-201ENST00000637708 154 ntBASIC4.05□□□□□ -1.76
TRIM47Q96LD4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM47Q96LD4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM47Q96LD4 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM47Q96LD4 Y_RNA.40-201ENST00000362645 93 ntBASIC4.04□□□□□ -1.76
TRIM47Q96LD4 SNORD38C-201ENST00000384381 69 ntBASIC4.04□□□□□ -1.76
TRIM47Q96LD4 Y_RNA.531-201ENST00000384589 121 ntBASIC4.04□□□□□ -1.76
TRIM47Q96LD4 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TRIM47Q96LD4 MRPL35P3-201ENST00000421557 364 ntBASIC4.04□□□□□ -1.76
TRIM47Q96LD4 SNRPGP10-201ENST00000432323 225 ntBASIC4.04□□□□□ -1.76
TRIM47Q96LD4 HMGN2P9-201ENST00000476875 229 ntBASIC4.04□□□□□ -1.76
TRIM47Q96LD4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.04□□□□□ -1.76
TRIM47Q96LD4 MIR5004-201ENST00000579078 107 ntBASIC4.04□□□□□ -1.76
TRIM47Q96LD4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TRIM47Q96LD4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.04□□□□□ -1.76
TRIM47Q96LD4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRIM47Q96LD4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM47Q96LD4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM47Q96LD4 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRIM47Q96LD4 SNORA80A-201ENST00000363922 136 ntBASIC4.03□□□□□ -1.76
TRIM47Q96LD4 RNY1P6-201ENST00000384193 109 ntBASIC4.03□□□□□ -1.76
TRIM47Q96LD4 AL031121.1-201ENST00000406553 254 ntBASIC4.03□□□□□ -1.76
TRIM47Q96LD4 Y_RNA.611-201ENST00000410682 108 ntBASIC4.03□□□□□ -1.76
TRIM47Q96LD4 Y_RNA.620-201ENST00000411009 88 ntBASIC4.03□□□□□ -1.76
TRIM47Q96LD4 AC006989.1-201ENST00000427212 131 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms