Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 SRIP3-201ENST00000413200 219 ntBASIC2.33□□□□□ -2.04
VPS50Q96JG6 RNU6-498P-201ENST00000459468 107 ntBASIC2.33□□□□□ -2.04
VPS50Q96JG6 TRBV12-1-201ENST00000479785 344 ntBASIC2.33□□□□□ -2.04
VPS50Q96JG6 RNA5SP320-201ENST00000516263 124 ntBASIC2.33□□□□□ -2.04
VPS50Q96JG6 SNORD53-201ENST00000579969 78 ntBASIC2.33□□□□□ -2.04
VPS50Q96JG6 AC078899.2-201ENST00000595282 212 ntBASIC2.33□□□□□ -2.04
VPS50Q96JG6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.33□□□□□ -2.04
VPS50Q96JG6 AC005828.6-201ENST00000606610 232 ntBASIC2.33□□□□□ -2.04
VPS50Q96JG6 AC064859.1-201ENST00000624741 174 ntBASIC2.33□□□□□ -2.04
VPS50Q96JG6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
VPS50Q96JG6 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS50Q96JG6 Y_RNA.136-201ENST00000363444 102 ntBASIC2.32□□□□□ -2.04
VPS50Q96JG6 SNORD27-201ENST00000363981 72 ntBASIC2.32□□□□□ -2.04
VPS50Q96JG6 RNU1-91P-201ENST00000364746 163 ntBASIC2.32□□□□□ -2.04
VPS50Q96JG6 Y_RNA.277-201ENST00000364754 102 ntBASIC2.32□□□□□ -2.04
VPS50Q96JG6 SNORA70B-201ENST00000384210 135 ntBASIC2.32□□□□□ -2.04
VPS50Q96JG6 SNORA20B-201ENST00000384220 132 ntBASIC2.32□□□□□ -2.04
VPS50Q96JG6 MT-TG-201ENST00000387429 68 ntBASIC2.32□□□□□ -2.04
VPS50Q96JG6 SNORA53-201ENST00000391141 249 ntBASIC2.32□□□□□ -2.04
VPS50Q96JG6 RN7SKP284-201ENST00000411002 343 ntBASIC2.32□□□□□ -2.04
VPS50Q96JG6 AC060773.1-201ENST00000421698 310 ntBASIC2.32□□□□□ -2.04
VPS50Q96JG6 AL356320.1-201ENST00000429616 163 ntBASIC2.32□□□□□ -2.04
VPS50Q96JG6 AL357134.1-201ENST00000445848 426 ntBASIC2.32□□□□□ -2.04
VPS50Q96JG6 AC074290.1-201ENST00000448883 135 ntBASIC2.32□□□□□ -2.04
VPS50Q96JG6 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS50Q96JG6 AC008413.1-201ENST00000511864 177 ntBASIC2.32□□□□□ -2.04
VPS50Q96JG6 AC087441.2-201ENST00000529141 262 ntBASIC2.32□□□□□ -2.04
VPS50Q96JG6 MIR4643-201ENST00000577473 78 ntBASIC2.32□□□□□ -2.04
VPS50Q96JG6 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.32□□□□□ -2.04
VPS50Q96JG6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.32□□□□□ -2.04
VPS50Q96JG6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VPS50Q96JG6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VPS50Q96JG6 MIRLET7G-201ENST00000362280 84 ntBASIC2.31□□□□□ -2.04
VPS50Q96JG6 Y_RNA.54-201ENST00000362766 105 ntBASIC2.31□□□□□ -2.04
VPS50Q96JG6 RNU6-1266P-201ENST00000362794 105 ntBASIC2.31□□□□□ -2.04
VPS50Q96JG6 RNA5SP425-201ENST00000410336 112 ntBASIC2.31□□□□□ -2.04
VPS50Q96JG6 RNU4-53P-201ENST00000410828 140 ntBASIC2.31□□□□□ -2.04
VPS50Q96JG6 RNU6-651P-201ENST00000411040 105 ntBASIC2.31□□□□□ -2.04
VPS50Q96JG6 AC091959.1-201ENST00000495857 238 ntBASIC2.31□□□□□ -2.04
VPS50Q96JG6 RN7SL636P-201ENST00000497504 294 ntBASIC2.31□□□□□ -2.04
VPS50Q96JG6 RNU6-388P-201ENST00000517012 105 ntBASIC2.31□□□□□ -2.04
VPS50Q96JG6 RNU6-389P-201ENST00000517048 105 ntBASIC2.31□□□□□ -2.04
VPS50Q96JG6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.31□□□□□ -2.04
VPS50Q96JG6 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.31□□□□□ -2.04
VPS50Q96JG6 AL596028.1-201ENST00000326971 197 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 SNORA25.1-201ENST00000362326 128 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 Y_RNA.99-201ENST00000363138 105 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 Y_RNA.172-201ENST00000363765 102 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 RNU6-1164P-201ENST00000364428 107 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 RNA5SP37-201ENST00000365420 130 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 Y_RNA.361-201ENST00000365515 120 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 Y_RNA.416-201ENST00000384014 113 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 Y_RNA.539-201ENST00000384635 107 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 AL121890.1-201ENST00000435457 205 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 AL135790.2-201ENST00000437701 267 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 AC234781.5-201ENST00000508429 271 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
VPS50Q96JG6 RNU6-191P-201ENST00000516295 94 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 MIR514B-201ENST00000516774 80 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 RNU6-856P-201ENST00000516959 98 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 AC021269.2-201ENST00000532318 330 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 MIR3945-201ENST00000581853 98 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 AC090425.1-201ENST00000610007 140 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 U2.14-201ENST00000615943 113 ntBASIC2.3□□□□□ -2.04
VPS50Q96JG6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.3□□□□□ -2.04
VPS50Q96JG6 MIR21-201ENST00000362134 72 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 Y_RNA.117-201ENST00000363294 101 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 RNU6-740P-201ENST00000364734 105 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 RNU4-52P-201ENST00000384209 138 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 RNU6-662P-201ENST00000384253 104 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 EDDM3CP-201ENST00000415977 425 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 OOSP1P1-201ENST00000423265 274 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 HMGN2P38-201ENST00000423806 265 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 AC090255.1-201ENST00000495779 349 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 RNU6-1023P-201ENST00000516137 106 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 RNU2-34P-201ENST00000516534 121 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 AC091544.4-201ENST00000555268 342 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 MIR3126-201ENST00000577443 74 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 U2.15-201ENST00000611544 191 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 U2.16-201ENST00000613119 191 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 U2.12-201ENST00000613778 191 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 U2.20-201ENST00000613956 192 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 U2.9-201ENST00000615427 191 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 U2.11-201ENST00000616345 191 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 U2.2-201ENST00000616535 191 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 U2.3-201ENST00000617785 191 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 U2.19-201ENST00000618602 191 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 RNU2-1-201ENST00000618664 191 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 U2.6-201ENST00000619225 191 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 U2.5-201ENST00000619465 191 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 U2.10-201ENST00000620268 191 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 AC078938.1-201ENST00000620993 318 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 ZNF658B-202ENST00000615961 3375 ntBASIC2.29□□□□□ -2.04
VPS50Q96JG6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
VPS50Q96JG6 Y_RNA.44-201ENST00000362676 108 ntBASIC2.28□□□□□ -2.04
VPS50Q96JG6 RNU6-1240P-201ENST00000365155 104 ntBASIC2.28□□□□□ -2.04
VPS50Q96JG6 Y_RNA.352-201ENST00000365439 102 ntBASIC2.28□□□□□ -2.04
VPS50Q96JG6 Y_RNA.476-201ENST00000384347 108 ntBASIC2.28□□□□□ -2.04
VPS50Q96JG6 SNORA67.4-201ENST00000384688 142 ntBASIC2.28□□□□□ -2.04
VPS50Q96JG6 RNU2-61P-201ENST00000411069 191 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms