Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 Y_RNA.512-201ENST00000384518 102 ntBASIC2.49□□□□□ -2.01
HPS3Q969F9 MIR221-201ENST00000385135 110 ntBASIC2.49□□□□□ -2.01
HPS3Q969F9 SNORA53-201ENST00000391141 249 ntBASIC2.49□□□□□ -2.01
HPS3Q969F9 RNU6-1199P-201ENST00000411249 104 ntBASIC2.49□□□□□ -2.01
HPS3Q969F9 AC016909.1-201ENST00000415916 166 ntBASIC2.49□□□□□ -2.01
HPS3Q969F9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.49□□□□□ -2.01
HPS3Q969F9 AP005660.1-201ENST00000522972 293 ntBASIC2.49□□□□□ -2.01
HPS3Q969F9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
HPS3Q969F9 AL161670.1-201ENST00000554348 137 ntBASIC2.49□□□□□ -2.01
HPS3Q969F9 AL137100.2-201ENST00000555786 315 ntBASIC2.49□□□□□ -2.01
HPS3Q969F9 MIR4524B-201ENST00000581569 115 ntBASIC2.49□□□□□ -2.01
HPS3Q969F9 AC005828.6-201ENST00000606610 232 ntBASIC2.49□□□□□ -2.01
HPS3Q969F9 AC037487.3-201ENST00000606668 112 ntBASIC2.49□□□□□ -2.01
HPS3Q969F9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.49□□□□□ -2.01
HPS3Q969F9 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HPS3Q969F9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HPS3Q969F9 SNORD114-7-201ENST00000362520 77 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 snoU2-30.2-201ENST00000362805 70 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 snoU2_19.2-201ENST00000363024 80 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 SNORD81.1-201ENST00000363064 77 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 SNORA20B-201ENST00000384220 132 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 Y_RNA.461-201ENST00000384263 103 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 AL031003.1-201ENST00000404229 172 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 SNORA3.2-201ENST00000408221 125 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 RNU4-53P-201ENST00000410828 140 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.48□□□□□ -2.01
HPS3Q969F9 AC010154.1-201ENST00000425857 269 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.48□□□□□ -2.01
HPS3Q969F9 TRBVB-201ENST00000477100 408 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 RNU7-193P-201ENST00000516723 65 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 RNU6-570P-201ENST00000517051 105 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.48□□□□□ -2.01
HPS3Q969F9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.48□□□□□ -2.01
HPS3Q969F9 AC005786.1-201ENST00000588553 154 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 AC078899.2-201ENST00000595282 212 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 AL353149.1-201ENST00000610667 244 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
HPS3Q969F9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.48□□□□□ -2.01
HPS3Q969F9 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
HPS3Q969F9 Y_RNA.84-201ENST00000363011 104 ntBASIC2.47□□□□□ -2.01
HPS3Q969F9 Y_RNA.144-201ENST00000363521 113 ntBASIC2.47□□□□□ -2.01
HPS3Q969F9 Y_RNA.286-201ENST00000364813 102 ntBASIC2.47□□□□□ -2.01
HPS3Q969F9 RNU6-290P-201ENST00000365212 101 ntBASIC2.47□□□□□ -2.01
HPS3Q969F9 Y_RNA.376-201ENST00000365638 108 ntBASIC2.47□□□□□ -2.01
HPS3Q969F9 Y_RNA.383-201ENST00000383855 97 ntBASIC2.47□□□□□ -2.01
HPS3Q969F9 MIR215-201ENST00000384858 110 ntBASIC2.47□□□□□ -2.01
HPS3Q969F9 MIR873-201ENST00000401120 77 ntBASIC2.47□□□□□ -2.01
HPS3Q969F9 SNORA11.4-201ENST00000408823 129 ntBASIC2.47□□□□□ -2.01
HPS3Q969F9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.47□□□□□ -2.01
HPS3Q969F9 MTND4LP30-201ENST00000454092 297 ntBASIC2.47□□□□□ -2.01
HPS3Q969F9 HSPE1P25-201ENST00000455484 251 ntBASIC2.47□□□□□ -2.01
HPS3Q969F9 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.47□□□□□ -2.01
HPS3Q969F9 SNORA31.25-201ENST00000517242 134 ntBASIC2.47□□□□□ -2.01
HPS3Q969F9 AC027419.1-201ENST00000522976 328 ntBASIC2.47□□□□□ -2.01
HPS3Q969F9 IGKV3-31-201ENST00000523109 329 ntBASIC2.47□□□□□ -2.01
HPS3Q969F9 MIR5694-201ENST00000581190 76 ntBASIC2.47□□□□□ -2.01
HPS3Q969F9 7SK.10-201ENST00000621414 298 ntBASIC2.47□□□□□ -2.01
HPS3Q969F9 CENPCP1-201ENST00000533085 2578 ntBASIC2.46□□□□□ -2.02
HPS3Q969F9 RNU6-463P-201ENST00000384340 107 ntBASIC2.46□□□□□ -2.02
HPS3Q969F9 RNU6-102P-201ENST00000384485 104 ntBASIC2.46□□□□□ -2.02
HPS3Q969F9 Y_RNA.569-201ENST00000384749 103 ntBASIC2.46□□□□□ -2.02
HPS3Q969F9 MIR568-201ENST00000385036 95 ntBASIC2.46□□□□□ -2.02
HPS3Q969F9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
HPS3Q969F9 RNU6-1248P-201ENST00000391096 64 ntBASIC2.46□□□□□ -2.02
HPS3Q969F9 AL355796.1-201ENST00000406706 323 ntBASIC2.46□□□□□ -2.02
HPS3Q969F9 RNU6-710P-201ENST00000410424 105 ntBASIC2.46□□□□□ -2.02
HPS3Q969F9 AL356320.1-201ENST00000429616 163 ntBASIC2.46□□□□□ -2.02
HPS3Q969F9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
HPS3Q969F9 RPL23AP3-201ENST00000453844 468 ntBASIC2.46□□□□□ -2.02
HPS3Q969F9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.46□□□□□ -2.02
HPS3Q969F9 snoU13.15-201ENST00000459407 104 ntBASIC2.46□□□□□ -2.02
HPS3Q969F9 RPS27P22-201ENST00000478056 241 ntBASIC2.46□□□□□ -2.02
HPS3Q969F9 RNU6-436P-201ENST00000516171 114 ntBASIC2.46□□□□□ -2.02
HPS3Q969F9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.46□□□□□ -2.02
HPS3Q969F9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.46□□□□□ -2.02
HPS3Q969F9 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.46□□□□□ -2.02
HPS3Q969F9 U4.1-201ENST00000620349 87 ntBASIC2.46□□□□□ -2.02
HPS3Q969F9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.46□□□□□ -2.02
HPS3Q969F9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HPS3Q969F9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
HPS3Q969F9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HPS3Q969F9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
HPS3Q969F9 SNORA27.1-201ENST00000362604 124 ntBASIC2.45□□□□□ -2.02
HPS3Q969F9 Y_RNA.329-201ENST00000365209 107 ntBASIC2.45□□□□□ -2.02
HPS3Q969F9 RNU6-407P-201ENST00000365280 104 ntBASIC2.45□□□□□ -2.02
HPS3Q969F9 RNU6-417P-201ENST00000384712 107 ntBASIC2.45□□□□□ -2.02
HPS3Q969F9 MIR515-2-201ENST00000384883 83 ntBASIC2.45□□□□□ -2.02
HPS3Q969F9 MIR515-1-201ENST00000384884 83 ntBASIC2.45□□□□□ -2.02
HPS3Q969F9 AL355497.1-201ENST00000406262 551 ntBASIC2.45□□□□□ -2.02
HPS3Q969F9 RNU6-1203P-201ENST00000410703 110 ntBASIC2.45□□□□□ -2.02
HPS3Q969F9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.45□□□□□ -2.02
HPS3Q969F9 HMGN2P3-201ENST00000433603 273 ntBASIC2.45□□□□□ -2.02
HPS3Q969F9 HMGN2P5-201ENST00000436882 273 ntBASIC2.45□□□□□ -2.02
HPS3Q969F9 RNU6-966P-201ENST00000516479 104 ntBASIC2.45□□□□□ -2.02
HPS3Q969F9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.45□□□□□ -2.02
HPS3Q969F9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.45□□□□□ -2.02
HPS3Q969F9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.45□□□□□ -2.02
HPS3Q969F9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms