Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RNU6-965P-201ENST00000516721 96 ntBASIC2.88□□□□□ -1.95
RTF1Q92541 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.88□□□□□ -1.95
RTF1Q92541 AC007336.1-201ENST00000576365 3828 ntBASIC2.88□□□□□ -1.95
RTF1Q92541 AC130289.1-201ENST00000577321 73 ntBASIC2.88□□□□□ -1.95
RTF1Q92541 DEFB117-201ENST00000602356 141 ntBASIC2.88□□□□□ -1.95
RTF1Q92541 AL049779.4-201ENST00000604500 156 ntBASIC2.88□□□□□ -1.95
RTF1Q92541 AC005828.6-201ENST00000606610 232 ntBASIC2.88□□□□□ -1.95
RTF1Q92541 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.88□□□□□ -1.95
RTF1Q92541 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.88□□□□□ -1.95
RTF1Q92541 U6.115-201ENST00000636045 103 ntBASIC2.88□□□□□ -1.95
RTF1Q92541 Y_RNA.76-201ENST00000362931 109 ntBASIC2.87□□□□□ -1.95
RTF1Q92541 Y_RNA.122-201ENST00000363331 96 ntBASIC2.87□□□□□ -1.95
RTF1Q92541 RNU1-23P-201ENST00000363361 144 ntBASIC2.87□□□□□ -1.95
RTF1Q92541 RNU6-324P-201ENST00000363957 106 ntBASIC2.87□□□□□ -1.95
RTF1Q92541 Y_RNA.200-201ENST00000364018 102 ntBASIC2.87□□□□□ -1.95
RTF1Q92541 Y_RNA.217-201ENST00000364214 105 ntBASIC2.87□□□□□ -1.95
RTF1Q92541 MIR561-201ENST00000385216 97 ntBASIC2.87□□□□□ -1.95
RTF1Q92541 MT-TR-201ENST00000387439 65 ntBASIC2.87□□□□□ -1.95
RTF1Q92541 AL031003.1-201ENST00000404229 172 ntBASIC2.87□□□□□ -1.95
RTF1Q92541 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.87□□□□□ -1.95
RTF1Q92541 Y_RNA.641-201ENST00000459414 105 ntBASIC2.87□□□□□ -1.95
RTF1Q92541 snoU13.26-201ENST00000459452 105 ntBASIC2.87□□□□□ -1.95
RTF1Q92541 COX6CP14-201ENST00000469580 174 ntBASIC2.87□□□□□ -1.95
RTF1Q92541 RNA5SP402-201ENST00000517148 110 ntBASIC2.87□□□□□ -1.95
RTF1Q92541 MIR3145-201ENST00000580727 82 ntBASIC2.87□□□□□ -1.95
RTF1Q92541 MIR3117-201ENST00000584034 78 ntBASIC2.87□□□□□ -1.95
RTF1Q92541 AL355297.2-201ENST00000604792 129 ntBASIC2.87□□□□□ -1.95
RTF1Q92541 AL449363.1-201ENST00000617815 186 ntBASIC2.87□□□□□ -1.95
RTF1Q92541 snoZ196.1-201ENST00000625269 89 ntBASIC2.87□□□□□ -1.95
RTF1Q92541 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
RTF1Q92541 SNORD114-7-201ENST00000362520 77 ntBASIC2.86□□□□□ -1.95
RTF1Q92541 RNU6-438P-201ENST00000365561 103 ntBASIC2.86□□□□□ -1.95
RTF1Q92541 RNU6-1289P-201ENST00000384431 106 ntBASIC2.86□□□□□ -1.95
RTF1Q92541 SNORA64-201ENST00000384674 134 ntBASIC2.86□□□□□ -1.95
RTF1Q92541 MIR1298-201ENST00000408783 112 ntBASIC2.86□□□□□ -1.95
RTF1Q92541 Y_RNA.590-201ENST00000410140 107 ntBASIC2.86□□□□□ -1.95
RTF1Q92541 RNU2-61P-201ENST00000411069 191 ntBASIC2.86□□□□□ -1.95
RTF1Q92541 AC009310.1-201ENST00000414414 451 ntBASIC2.86□□□□□ -1.95
RTF1Q92541 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.86□□□□□ -1.95
RTF1Q92541 HMGN2P18-201ENST00000450680 270 ntBASIC2.86□□□□□ -1.95
RTF1Q92541 SNORD2.1-201ENST00000458762 69 ntBASIC2.86□□□□□ -1.95
RTF1Q92541 snoU13.15-201ENST00000459407 104 ntBASIC2.86□□□□□ -1.95
RTF1Q92541 RNU6-221P-201ENST00000459541 99 ntBASIC2.86□□□□□ -1.95
RTF1Q92541 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RTF1Q92541 RNU6-948P-201ENST00000516374 107 ntBASIC2.86□□□□□ -1.95
RTF1Q92541 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
RTF1Q92541 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RTF1Q92541 RNU6-710P-201ENST00000410424 105 ntBASIC2.85□□□□□ -1.95
RTF1Q92541 RNU2-34P-201ENST00000516534 121 ntBASIC2.85□□□□□ -1.95
RTF1Q92541 SCARNA16.3-201ENST00000516595 184 ntBASIC2.85□□□□□ -1.95
RTF1Q92541 RNA5SP490-201ENST00000517141 136 ntBASIC2.85□□□□□ -1.95
RTF1Q92541 RNU1-104P-201ENST00000517280 175 ntBASIC2.85□□□□□ -1.95
RTF1Q92541 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.85□□□□□ -1.95
RTF1Q92541 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.85□□□□□ -1.95
RTF1Q92541 MIR4446-201ENST00000578505 67 ntBASIC2.85□□□□□ -1.95
RTF1Q92541 AC104984.5-201ENST00000586878 94 ntBASIC2.85□□□□□ -1.95
RTF1Q92541 MIR6715A-201ENST00000615929 79 ntBASIC2.85□□□□□ -1.95
RTF1Q92541 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RTF1Q92541 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
RTF1Q92541 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RTF1Q92541 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.84□□□□□ -1.95
RTF1Q92541 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
RTF1Q92541 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.84□□□□□ -1.95
RTF1Q92541 RNU6-1235P-201ENST00000384559 107 ntBASIC2.84□□□□□ -1.95
RTF1Q92541 RNU2-48P-201ENST00000410694 191 ntBASIC2.84□□□□□ -1.95
RTF1Q92541 CR769767.1-201ENST00000436337 346 ntBASIC2.84□□□□□ -1.95
RTF1Q92541 AL445687.1-201ENST00000439946 251 ntBASIC2.84□□□□□ -1.95
RTF1Q92541 RNU6-498P-201ENST00000459468 107 ntBASIC2.84□□□□□ -1.95
RTF1Q92541 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.84□□□□□ -1.95
RTF1Q92541 SNORA70.12-201ENST00000516084 153 ntBASIC2.84□□□□□ -1.95
RTF1Q92541 Y_RNA.679-201ENST00000516416 91 ntBASIC2.84□□□□□ -1.95
RTF1Q92541 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.84□□□□□ -1.95
RTF1Q92541 AL159152.1-201ENST00000635019 2587 ntBASIC2.84□□□□□ -1.96
RTF1Q92541 Y_RNA.83-201ENST00000363005 113 ntBASIC2.83□□□□□ -1.96
RTF1Q92541 Y_RNA.117-201ENST00000363294 101 ntBASIC2.83□□□□□ -1.96
RTF1Q92541 Y_RNA.199-201ENST00000364014 102 ntBASIC2.83□□□□□ -1.96
RTF1Q92541 Y_RNA.274-201ENST00000364714 101 ntBASIC2.83□□□□□ -1.96
RTF1Q92541 Y_RNA.292-201ENST00000364904 97 ntBASIC2.83□□□□□ -1.96
RTF1Q92541 RNY4P28-201ENST00000365281 93 ntBASIC2.83□□□□□ -1.96
RTF1Q92541 RNU6-662P-201ENST00000384253 104 ntBASIC2.83□□□□□ -1.96
RTF1Q92541 SNORA67.3-201ENST00000384366 140 ntBASIC2.83□□□□□ -1.96
RTF1Q92541 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.83□□□□□ -1.96
RTF1Q92541 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.83□□□□□ -1.96
RTF1Q92541 AL137159.1-201ENST00000452808 512 ntBASIC2.83□□□□□ -1.96
RTF1Q92541 Y_RNA.638-201ENST00000459374 113 ntBASIC2.83□□□□□ -1.96
RTF1Q92541 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.83□□□□□ -1.96
RTF1Q92541 AC093259.1-201ENST00000509755 300 ntBASIC2.83□□□□□ -1.96
RTF1Q92541 AC090616.3-201ENST00000582184 217 ntBASIC2.83□□□□□ -1.96
RTF1Q92541 MIR219B-201ENST00000637023 88 ntBASIC2.83□□□□□ -1.96
RTF1Q92541 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.83□□□□□ -1.96
RTF1Q92541 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RTF1Q92541 SNORA67.1-201ENST00000364749 141 ntBASIC2.82□□□□□ -1.96
RTF1Q92541 Y_RNA.297-201ENST00000364950 91 ntBASIC2.82□□□□□ -1.96
RTF1Q92541 Y_RNA.332-201ENST00000365271 113 ntBASIC2.82□□□□□ -1.96
RTF1Q92541 RNU6-651P-201ENST00000411040 105 ntBASIC2.82□□□□□ -1.96
RTF1Q92541 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.82□□□□□ -1.96
RTF1Q92541 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.82□□□□□ -1.96
RTF1Q92541 AL138752.1-201ENST00000452964 351 ntBASIC2.82□□□□□ -1.96
RTF1Q92541 SNORA31.11-201ENST00000516528 139 ntBASIC2.82□□□□□ -1.96
RTF1Q92541 RNU6-182P-201ENST00000516970 105 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms