Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 MTND5P15-201ENST00000434246 349 ntBASIC2.6□□□□□ -1.99
ATRIPQ8WXE1 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
ATRIPQ8WXE1 AL161788.1-201ENST00000441805 169 ntBASIC2.6□□□□□ -1.99
ATRIPQ8WXE1 RN7SL636P-201ENST00000497504 294 ntBASIC2.6□□□□□ -1.99
ATRIPQ8WXE1 RNU5F-4P-201ENST00000516581 114 ntBASIC2.6□□□□□ -1.99
ATRIPQ8WXE1 RPL17P51-201ENST00000605218 238 ntBASIC2.6□□□□□ -1.99
ATRIPQ8WXE1 AC037487.3-201ENST00000606668 112 ntBASIC2.6□□□□□ -1.99
ATRIPQ8WXE1 AL353997.5-201ENST00000618886 171 ntBASIC2.6□□□□□ -1.99
ATRIPQ8WXE1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.6□□□□□ -1.99
ATRIPQ8WXE1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
ATRIPQ8WXE1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 AL596028.1-201ENST00000326971 197 ntBASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 RNU6-545P-201ENST00000362681 104 ntBASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 RNU4-80P-201ENST00000363200 141 ntBASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 RNU6-1305P-201ENST00000364353 104 ntBASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 RNU1-91P-201ENST00000364746 163 ntBASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 RNU6-234P-201ENST00000365229 104 ntBASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 RNU6-514P-201ENST00000384208 107 ntBASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 SNORD58.1-201ENST00000391313 66 ntBASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 RNU2-54P-201ENST00000410299 190 ntBASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 HMGN2P3-201ENST00000433603 273 ntBASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 HMGN2P5-201ENST00000436882 273 ntBASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 ATP5EP1-201ENST00000510257 156 ntBASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 RNA5SP458-201ENST00000516188 119 ntBASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 RNU6-965P-201ENST00000516721 96 ntBASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 DEFB117-201ENST00000602356 141 ntBASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 MIR6840-201ENST00000611937 71 ntBASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 AC131280.1-202ENST00000624067 4211 ntBASIC2.59□□□□□ -1.99
ATRIPQ8WXE1 AC005336.3-201ENST00000623833 2679 ntBASIC2.58□□□□□ -2
ATRIPQ8WXE1 Y_RNA.136-201ENST00000363444 102 ntBASIC2.58□□□□□ -2
ATRIPQ8WXE1 RNU6-200P-201ENST00000364743 107 ntBASIC2.58□□□□□ -2
ATRIPQ8WXE1 RNA5SP240-201ENST00000365355 128 ntBASIC2.58□□□□□ -2
ATRIPQ8WXE1 RNU6-1310P-201ENST00000384153 107 ntBASIC2.58□□□□□ -2
ATRIPQ8WXE1 MIR548B-201ENST00000385247 97 ntBASIC2.58□□□□□ -2
ATRIPQ8WXE1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.58□□□□□ -2
ATRIPQ8WXE1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.58□□□□□ -2
ATRIPQ8WXE1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.58□□□□□ -2
ATRIPQ8WXE1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.58□□□□□ -2
ATRIPQ8WXE1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.58□□□□□ -2
ATRIPQ8WXE1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.58□□□□□ -2
ATRIPQ8WXE1 RNU2-12P-201ENST00000517216 168 ntBASIC2.58□□□□□ -2
ATRIPQ8WXE1 CYCSP26-201ENST00000534107 320 ntBASIC2.58□□□□□ -2
ATRIPQ8WXE1 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.58□□□□□ -2
ATRIPQ8WXE1 AC008873.1-201ENST00000625051 138 ntBASIC2.58□□□□□ -2
ATRIPQ8WXE1 MIR1248-201ENST00000629190 106 ntBASIC2.58□□□□□ -2
ATRIPQ8WXE1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
ATRIPQ8WXE1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
ATRIPQ8WXE1 RNY1-201ENST00000364228 113 ntBASIC2.57□□□□□ -2
ATRIPQ8WXE1 Y_RNA.275-201ENST00000364726 110 ntBASIC2.57□□□□□ -2
ATRIPQ8WXE1 RNU6-662P-201ENST00000384253 104 ntBASIC2.57□□□□□ -2
ATRIPQ8WXE1 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.57□□□□□ -2
ATRIPQ8WXE1 RNU2-48P-201ENST00000410694 191 ntBASIC2.57□□□□□ -2
ATRIPQ8WXE1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.57□□□□□ -2
ATRIPQ8WXE1 RNU7-14P-201ENST00000459331 62 ntBASIC2.57□□□□□ -2
ATRIPQ8WXE1 HMGN2P9-201ENST00000476875 229 ntBASIC2.57□□□□□ -2
ATRIPQ8WXE1 CKS1BP2-201ENST00000497342 240 ntBASIC2.57□□□□□ -2
ATRIPQ8WXE1 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.57□□□□□ -2
ATRIPQ8WXE1 SNORD116-28-201ENST00000516123 91 ntBASIC2.57□□□□□ -2
ATRIPQ8WXE1 RNU4-71P-201ENST00000516258 113 ntBASIC2.57□□□□□ -2
ATRIPQ8WXE1 SNORA48.11-201ENST00000517015 89 ntBASIC2.57□□□□□ -2
ATRIPQ8WXE1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.57□□□□□ -2
ATRIPQ8WXE1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.57□□□□□ -2
ATRIPQ8WXE1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.56□□□□□ -2
ATRIPQ8WXE1 RNU6-324P-201ENST00000363957 106 ntBASIC2.56□□□□□ -2
ATRIPQ8WXE1 Y_RNA.329-201ENST00000365209 107 ntBASIC2.56□□□□□ -2
ATRIPQ8WXE1 RNU2-32P-201ENST00000411193 191 ntBASIC2.56□□□□□ -2
ATRIPQ8WXE1 AL139156.1-201ENST00000412785 841 ntBASIC2.56□□□□□ -2
ATRIPQ8WXE1 CYP2C59P-201ENST00000457790 269 ntBASIC2.56□□□□□ -2
ATRIPQ8WXE1 AC022616.8-201ENST00000533569 253 ntBASIC2.56□□□□□ -2
ATRIPQ8WXE1 MIR1273D-201ENST00000577266 86 ntBASIC2.56□□□□□ -2
ATRIPQ8WXE1 AL162424.1-201ENST00000602325 221 ntBASIC2.56□□□□□ -2
ATRIPQ8WXE1 AC067747.1-201ENST00000608026 250 ntBASIC2.56□□□□□ -2
ATRIPQ8WXE1 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
ATRIPQ8WXE1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
ATRIPQ8WXE1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.56□□□□□ -2
ATRIPQ8WXE1 SNORD114-1-201ENST00000362705 72 ntBASIC2.55□□□□□ -2
ATRIPQ8WXE1 U3.8-201ENST00000363675 217 ntBASIC2.55□□□□□ -2
ATRIPQ8WXE1 Y_RNA.297-201ENST00000364950 91 ntBASIC2.55□□□□□ -2
ATRIPQ8WXE1 RNU6-546P-201ENST00000383991 107 ntBASIC2.55□□□□□ -2
ATRIPQ8WXE1 RNU6-1289P-201ENST00000384431 106 ntBASIC2.55□□□□□ -2
ATRIPQ8WXE1 U3.40-201ENST00000408706 208 ntBASIC2.55□□□□□ -2
ATRIPQ8WXE1 MIR1298-201ENST00000408783 112 ntBASIC2.55□□□□□ -2
ATRIPQ8WXE1 RNU2-64P-201ENST00000411315 191 ntBASIC2.55□□□□□ -2
ATRIPQ8WXE1 TOMM22P2-201ENST00000430735 237 ntBASIC2.55□□□□□ -2
ATRIPQ8WXE1 AC018868.1-201ENST00000491307 315 ntBASIC2.55□□□□□ -2
ATRIPQ8WXE1 RNU6-191P-201ENST00000516295 94 ntBASIC2.55□□□□□ -2
ATRIPQ8WXE1 SNORA31.25-201ENST00000517242 134 ntBASIC2.55□□□□□ -2
ATRIPQ8WXE1 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.55□□□□□ -2
ATRIPQ8WXE1 AC078899.2-201ENST00000595282 212 ntBASIC2.55□□□□□ -2
ATRIPQ8WXE1 AC006380.1-201ENST00000603598 186 ntBASIC2.55□□□□□ -2
ATRIPQ8WXE1 AL355297.2-201ENST00000604792 129 ntBASIC2.55□□□□□ -2
ATRIPQ8WXE1 Y_RNA.122-201ENST00000363331 96 ntBASIC2.54□□□□□ -2
ATRIPQ8WXE1 Y_RNA.200-201ENST00000364018 102 ntBASIC2.54□□□□□ -2
ATRIPQ8WXE1 SNORD115-30-201ENST00000364117 82 ntBASIC2.54□□□□□ -2
ATRIPQ8WXE1 SNORA16B-201ENST00000364674 135 ntBASIC2.54□□□□□ -2
ATRIPQ8WXE1 MIR586-201ENST00000385035 97 ntBASIC2.54□□□□□ -2
ATRIPQ8WXE1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.54□□□□□ -2
ATRIPQ8WXE1 Y_RNA.590-201ENST00000410140 107 ntBASIC2.54□□□□□ -2
ATRIPQ8WXE1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms