| ASAP3 | Q8TDY4 | RPL27AP5-201 | ENST00000469428 | 449 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | AC090142.3-201 | ENST00000519012 | 385 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | AC090049.2-201 | ENST00000550377 | 109 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | AL929325.1-201 | ENST00000603096 | 117 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | AL162274.2-201 | ENST00000614406 | 332 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | ANP32E-209 | ENST00000616917 | 2989 nt | TSL 2 BASIC | 3.42 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | MIR1248-201 | ENST00000629190 | 106 nt | BASIC | 3.42 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | FILIP1L-206 | ENST00000471562 | 2854 nt | TSL 1 (best) BASIC | 3.42 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | CLOCK-201 | ENST00000309964 | 10304 nt | APPRIS P1 TSL 1 (best) BASIC | 3.42 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | RNU6-1336P-201 | ENST00000383886 | 109 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | Z92545.1-201 | ENST00000411782 | 234 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | AC245102.2-201 | ENST00000448956 | 180 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | HMGN2P18-201 | ENST00000450680 | 270 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | S100A11P2-201 | ENST00000467589 | 312 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | AC010255.2-201 | ENST00000505209 | 428 nt | TSL 3 BASIC | 3.41 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | SNORD59.2-201 | ENST00000516873 | 68 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | AL049861.1-201 | ENST00000603130 | 150 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | AC013412.1-201 | ENST00000610687 | 192 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | ETDC-201 | ENST00000635820 | 180 nt | APPRIS P1 BASIC | 3.41 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | MIR622-201 | ENST00000638396 | 96 nt | BASIC | 3.41 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | THEMIS-201 | ENST00000368248 | 3866 nt | APPRIS P3 TSL 1 (best) BASIC | 3.41 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | ERBIN-204 | ENST00000380943 | 6410 nt | APPRIS P3 TSL 1 (best) BASIC | 3.41 | □□□□□ -1.86 | | |
| ASAP3 | Q8TDY4 | RNU1-22P-201 | ENST00000363334 | 158 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | RNU4-13P-201 | ENST00000364019 | 141 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | SNORD15B-201 | ENST00000384714 | 146 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | TRAJ17-201 | ENST00000390520 | 63 nt | APPRIS P1 BASIC | 3.4 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | U6atac.2-201 | ENST00000408644 | 118 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | AL158823.1-201 | ENST00000418441 | 478 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | U91324.1-201 | ENST00000442864 | 447 nt | TSL 5 BASIC | 3.4 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | RPS27P22-201 | ENST00000478056 | 241 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | RAC1P5-201 | ENST00000512182 | 576 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | RNU6-1299P-201 | ENST00000516316 | 100 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | AC097639.2-201 | ENST00000603159 | 172 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | AC104819.3-201 | ENST00000603264 | 540 nt | TSL 4 BASIC | 3.4 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | XIST_intron.1-201 | ENST00000619444 | 68 nt | BASIC | 3.4 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | OR5V1-217 | ENST00000641768 | 2763 nt | APPRIS P1 BASIC | 3.4 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | TDRD15-201 | ENST00000405799 | 6135 nt | APPRIS P1 TSL 2 BASIC | 3.4 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | DOPEY1-203 | ENST00000369739 | 7743 nt | APPRIS ALT1 TSL 1 (best) BASIC | 3.4 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | SLC27A2-203 | ENST00000544960 | 2025 nt | TSL 2 BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | CC2D2B-210 | ENST00000636965 | 3247 nt | TSL 5 BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | AC073325.2-201 | ENST00000339545 | 159 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | Y_RNA.203-201 | ENST00000364106 | 102 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | Y_RNA.280-201 | ENST00000364765 | 112 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | RNU6-438P-201 | ENST00000365561 | 103 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | LINC00583-201 | ENST00000381010 | 387 nt | TSL 2 BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | RNU6-429P-201 | ENST00000384582 | 108 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | RN7SKP220-201 | ENST00000410611 | 288 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | RNU6-1064P-201 | ENST00000410626 | 104 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | RPS12P18-201 | ENST00000442381 | 270 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | RPS4XP11-201 | ENST00000446897 | 772 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | AC090515.1-201 | ENST00000465295 | 476 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | AC097462.1-201 | ENST00000514125 | 324 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | SNORD77.4-201 | ENST00000516158 | 81 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | RNA5SP153-201 | ENST00000516498 | 76 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | RNU6-965P-201 | ENST00000516721 | 96 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | AC024270.4-201 | ENST00000570202 | 421 nt | TSL 3 BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | SNORA50A-202 | ENST00000629536 | 136 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | AC008264.2-201 | ENST00000610193 | 3731 nt | BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | ZCCHC10-202 | ENST00000355372 | 2160 nt | APPRIS ALT2 TSL 2 BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | OR8K3-204 | ENST00000641689 | 2380 nt | APPRIS P1 BASIC | 3.39 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | BCLAF1-205 | ENST00000527536 | 5371 nt | TSL 5 BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | KNL1-202 | ENST00000399668 | 7607 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | AC114316.2-202 | ENST00000502934 | 2957 nt | TSL 2 BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | SNORA25.7-201 | ENST00000364375 | 127 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | Y_RNA.294-201 | ENST00000364916 | 102 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | RPL21P3-201 | ENST00000395517 | 478 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | AC005160.1-201 | ENST00000432405 | 381 nt | TSL 3 BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | MTCO1P44-201 | ENST00000441935 | 243 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | AL357134.1-201 | ENST00000445848 | 426 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | SNORD11-201 | ENST00000459124 | 84 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | SCARNA3-201 | ENST00000517097 | 143 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | PRELID2P1-201 | ENST00000552837 | 301 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | AC022469.2-201 | ENST00000554759 | 396 nt | TSL 5 BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | AL357054.2-201 | ENST00000607644 | 423 nt | TSL 5 BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | uc_338.4-201 | ENST00000616635 | 176 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | NPPA-AS1_3.1-201 | ENST00000617059 | 108 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | MIR7157-201 | ENST00000635801 | 60 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | C20orf24-208 | ENST00000639924 | 351 nt | TSL 5 BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | ROCK1P1-203 | ENST00000608049 | 2457 nt | TSL 1 (best) BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | TMEM232-201 | ENST00000455884 | 2501 nt | APPRIS P2 TSL 2 BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | AC091152.2-201 | ENST00000591628 | 2569 nt | BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | SYNE2-212 | ENST00000554584 | 20508 nt | TSL 5 BASIC | 3.38 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | GNAI3-201 | ENST00000369851 | 27174 nt | APPRIS P1 TSL 1 (best) BASIC | 3.37 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | CEP57-213 | ENST00000541150 | 2911 nt | APPRIS ALT2 TSL 5 BASIC | 3.37 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | CUL3-204 | ENST00000409777 | 3147 nt | TSL 1 (best) BASIC | 3.37 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | GYPA-201 | ENST00000324022 | 751 nt | APPRIS ALT2 TSL 1 (best) BASIC | 3.37 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | Y_RNA.120-201 | ENST00000363304 | 110 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | RNU6-525P-201 | ENST00000363685 | 104 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | RNU6-476P-201 | ENST00000384726 | 107 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | MIR95-201 | ENST00000385072 | 81 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | AC063976.3-201 | ENST00000426849 | 329 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | RNA5SP490-201 | ENST00000517141 | 136 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | Y_RNA.757-201 | ENST00000578934 | 114 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | MIR2681-201 | ENST00000581814 | 105 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | AC105245.1-201 | ENST00000581934 | 244 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | MIR4438-201 | ENST00000585271 | 93 nt | BASIC | 3.37 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | OSBPL1A-217 | ENST00000638614 | 84 nt | TSL 5 BASIC | 3.37 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | ARHGAP11A-207 | ENST00000565905 | 3318 nt | TSL 2 BASIC | 3.37 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | MIR22-201 | ENST00000362190 | 85 nt | BASIC | 3.36 | □□□□□ -1.87 | | |
| ASAP3 | Q8TDY4 | U8.1-201 | ENST00000362843 | 134 nt | BASIC | 3.36 | □□□□□ -1.87 | | |