Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
NKX2-3Q8TAU0 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.28□□□□□ -1.73
NKX2-3Q8TAU0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 FAM35DP-201ENST00000323387 2712 ntBASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 SNORD115-13-201ENST00000363358 82 ntBASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 SNORA33-201ENST00000363664 130 ntBASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 SNORD115-16-201ENST00000363887 82 ntBASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 RNU6-283P-201ENST00000364788 107 ntBASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 SNORD115-1-201ENST00000364961 82 ntBASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 Y_RNA.426-201ENST00000384068 113 ntBASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 RNU6-402P-201ENST00000410678 103 ntBASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 RNU2-11P-201ENST00000459191 187 ntBASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 AC109329.2-201ENST00000519658 482 ntBASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 AP000553.6-201ENST00000641242 118 ntBASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 LINC02471-203ENST00000641941 4752 ntBASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NKX2-3Q8TAU0 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-3Q8TAU0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-3Q8TAU0 FAM35CP-201ENST00000554755 2470 ntBASIC4.26□□□□□ -1.73
NKX2-3Q8TAU0 snoU2_19.1-201ENST00000362361 80 ntBASIC4.26□□□□□ -1.73
NKX2-3Q8TAU0 RNU1-22P-201ENST00000363334 158 ntBASIC4.26□□□□□ -1.73
NKX2-3Q8TAU0 RNU1-57P-201ENST00000384491 166 ntBASIC4.26□□□□□ -1.73
NKX2-3Q8TAU0 RNU6-1104P-201ENST00000384723 104 ntBASIC4.26□□□□□ -1.73
NKX2-3Q8TAU0 RNU6-57P-201ENST00000411348 103 ntBASIC4.26□□□□□ -1.73
NKX2-3Q8TAU0 AC005326.1-201ENST00000429197 123 ntBASIC4.26□□□□□ -1.73
NKX2-3Q8TAU0 AC004486.1-201ENST00000546846 233 ntBASIC4.26□□□□□ -1.73
NKX2-3Q8TAU0 MIR4694-201ENST00000578534 80 ntBASIC4.26□□□□□ -1.73
NKX2-3Q8TAU0 MIR486-1-201ENST00000612171 68 ntBASIC4.26□□□□□ -1.73
NKX2-3Q8TAU0 U4.6-201ENST00000621618 127 ntBASIC4.26□□□□□ -1.73
NKX2-3Q8TAU0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NKX2-3Q8TAU0 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-3Q8TAU0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-3Q8TAU0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-3Q8TAU0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NKX2-3Q8TAU0 RNU6-170P-201ENST00000362832 104 ntBASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 RNA5SP322-201ENST00000363617 119 ntBASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 Y_RNA.410-201ENST00000383992 113 ntBASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 U8.17-201ENST00000391292 132 ntBASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 SNRPGP13-201ENST00000442212 177 ntBASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 RNU7-164P-201ENST00000459221 62 ntBASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 RPS27P22-201ENST00000478056 241 ntBASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 Y_RNA.666-201ENST00000516187 112 ntBASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 RNA5SP309-201ENST00000516670 106 ntBASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 AC068657.1-201ENST00000520807 306 ntBASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 AC012531.4-201ENST00000616509 177 ntBASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 AC002076.2-201ENST00000617362 122 ntBASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 MIR376A2-201ENST00000636782 80 ntBASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
NKX2-3Q8TAU0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NKX2-3Q8TAU0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
NKX2-3Q8TAU0 RNU6-219P-201ENST00000364728 107 ntBASIC4.24□□□□□ -1.73
NKX2-3Q8TAU0 RNU1-89P-201ENST00000384592 164 ntBASIC4.24□□□□□ -1.73
NKX2-3Q8TAU0 RNU6-162P-201ENST00000516228 103 ntBASIC4.24□□□□□ -1.73
NKX2-3Q8TAU0 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-3Q8TAU0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX2-3Q8TAU0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.24□□□□□ -1.73
NKX2-3Q8TAU0 MIR3117-201ENST00000584034 78 ntBASIC4.24□□□□□ -1.73
NKX2-3Q8TAU0 AC020914.4-201ENST00000597690 277 ntBASIC4.24□□□□□ -1.73
NKX2-3Q8TAU0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NKX2-3Q8TAU0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.24□□□□□ -1.73
NKX2-3Q8TAU0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 SNORD115-35-201ENST00000365122 82 ntBASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 Y_RNA.507-201ENST00000384500 99 ntBASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 MRPL35P3-201ENST00000421557 364 ntBASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 RPL30P14-201ENST00000482744 348 ntBASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 RNU7-123P-201ENST00000515911 60 ntBASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 RNU2-27P-201ENST00000516185 142 ntBASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 RNU6-948P-201ENST00000516374 107 ntBASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 AC008507.4-201ENST00000585464 127 ntBASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 HMGN2P15-201ENST00000585707 270 ntBASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
NKX2-3Q8TAU0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-3Q8TAU0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
NKX2-3Q8TAU0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-3Q8TAU0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-3Q8TAU0 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
NKX2-3Q8TAU0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms