Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 MIR610-201ENST00000385139 96 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 SNORA40.8-201ENST00000411034 126 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AC009961.2-201ENST00000435771 251 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RNU6-1110P-201ENST00000516462 101 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AC007751.1-201ENST00000529260 376 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AC011195.1-201ENST00000578177 177 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AL355297.3-201ENST00000604082 446 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 SEPT14P19-203ENST00000633205 211 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RNU6-654P-201ENST00000364373 107 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 MIR1185-2-201ENST00000408687 86 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RNU6-613P-201ENST00000410412 108 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AC004866.1-201ENST00000411748 78 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC0.03□□□□□ -2.4
SYNE1Q8NF91 MTND1P4-201ENST00000435196 415 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 Z98949.2-201ENST00000440996 144 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AL033528.1-201ENST00000453780 140 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AC093534.1-201ENST00000504977 132 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AC091133.4-201ENST00000511142 308 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RNU7-12P-201ENST00000516030 62 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 Y_RNA.684-201ENST00000516510 99 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RNU7-43P-201ENST00000516554 64 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RNU2-46P-201ENST00000517038 113 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RNU6-58P-201ENST00000517143 103 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 MIR4778-201ENST00000577635 80 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RMST_3.1-201ENST00000611651 109 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AC106754.2-201ENST00000623006 233 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AC027279.3-201ENST00000625055 122 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 Y_RNA.159-201ENST00000363674 87 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RNU6-116P-201ENST00000384042 109 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 Y_RNA.447-201ENST00000384184 113 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AL590632.1-201ENST00000424289 371 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.03□□□□□ -2.4
SYNE1Q8NF91 ELOCP24-201ENST00000456370 334 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.03□□□□□ -2.4
SYNE1Q8NF91 MIR8076-201ENST00000611401 83 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 AC103705.1-201ENST00000619013 241 ntBASIC0.03□□□□□ -2.4
SYNE1Q8NF91 RNU6-371P-201ENST00000364283 108 ntBASIC0.03□□□□□ -2.41
SYNE1Q8NF91 RNU6-925P-201ENST00000384629 104 ntBASIC0.03□□□□□ -2.41
SYNE1Q8NF91 MIR635-201ENST00000384830 98 ntBASIC0.03□□□□□ -2.41
SYNE1Q8NF91 MRPS10P2-201ENST00000431226 381 ntBASIC0.03□□□□□ -2.41
SYNE1Q8NF91 RNU7-57P-201ENST00000459540 60 ntBASIC0.03□□□□□ -2.41
SYNE1Q8NF91 SNORA25.17-201ENST00000517184 124 ntBASIC0.03□□□□□ -2.41
SYNE1Q8NF91 AC019193.3-201ENST00000609144 554 ntBASIC0.03□□□□□ -2.41
SYNE1Q8NF91 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.03□□□□□ -2.41
SYNE1Q8NF91 RNU6-1103P-201ENST00000384150 107 ntBASIC0.03□□□□□ -2.41
SYNE1Q8NF91 RNU6-417P-201ENST00000384712 107 ntBASIC0.03□□□□□ -2.41
SYNE1Q8NF91 MIR454-201ENST00000390180 115 ntBASIC0.03□□□□□ -2.41
SYNE1Q8NF91 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.03□□□□□ -2.41
SYNE1Q8NF91 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC0.03□□□□□ -2.41
SYNE1Q8NF91 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC0.03□□□□□ -2.41
SYNE1Q8NF91 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.03□□□□□ -2.41
SYNE1Q8NF91 AC131281.1-201ENST00000522984 164 ntBASIC0.03□□□□□ -2.41
SYNE1Q8NF91 AK6P2-201ENST00000549020 471 ntBASIC0.03□□□□□ -2.41
SYNE1Q8NF91 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.03□□□□□ -2.41
SYNE1Q8NF91 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.41
SYNE1Q8NF91 RBM11P1-201ENST00000604951 799 ntBASIC0.03□□□□□ -2.41
SYNE1Q8NF91 AC004832.4-201ENST00000608952 331 ntBASIC0.03□□□□□ -2.41
SYNE1Q8NF91 Y_RNA.28-201ENST00000362554 111 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 MIR521-1-201ENST00000384902 87 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AC243428.1-201ENST00000421099 264 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.02□□□□□ -2.41
SYNE1Q8NF91 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.02□□□□□ -2.41
SYNE1Q8NF91 MIR6828-201ENST00000636181 60 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 Y_RNA.336-201ENST00000365307 109 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 Y_RNA.370-201ENST00000365589 108 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 MIR224-201ENST00000384889 81 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 MIR15B-201ENST00000385045 98 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.02□□□□□ -2.41
SYNE1Q8NF91 EPS15P1-201ENST00000448836 336 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 U8.19-201ENST00000459095 133 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 U8.22-201ENST00000459141 133 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.02□□□□□ -2.41
SYNE1Q8NF91 FGF7P1-201ENST00000582820 288 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 HULC.1-201ENST00000612720 240 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 FGF7P2-201ENST00000332473 296 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 MIR365A-201ENST00000362260 87 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 SNORD18A-201ENST00000363753 72 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 SNORA75.6-201ENST00000391318 127 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.02□□□□□ -2.41
SYNE1Q8NF91 PDCL2P1-201ENST00000419302 352 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 HMGN2P22-201ENST00000427588 175 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 GPR143P-201ENST00000434155 205 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AC104332.1-201ENST00000440471 797 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AC004386.2-201ENST00000441858 148 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 RPS29P27-201ENST00000463711 170 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AC007215.1-201ENST00000464893 276 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AC046134.1-201ENST00000514454 666 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6-1114P-201ENST00000516022 107 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6-922P-201ENST00000516753 99 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 SNORA28-201ENST00000606769 126 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 MIR1-1-201ENST00000362147 71 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 Y_RNA.490-201ENST00000384413 102 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 RNU6-606P-201ENST00000384721 111 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AL049545.1-201ENST00000401856 572 ntBASIC0.02□□□□□ -2.41
SYNE1Q8NF91 AL008987.1-201ENST00000415528 237 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms