Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC131055.1-201ENST00000584626 316 ntBASIC3.62□□□□□ -1.83
SIX5Q8N196 AC007229.1-201ENST00000590455 412 ntBASIC3.62□□□□□ -1.83
SIX5Q8N196 U2.20-201ENST00000613956 192 ntBASIC3.62□□□□□ -1.83
SIX5Q8N196 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.62□□□□□ -1.83
SIX5Q8N196 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.62□□□□□ -1.83
SIX5Q8N196 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
SIX5Q8N196 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SIX5Q8N196 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SIX5Q8N196 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SIX5Q8N196 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SIX5Q8N196 RNU6-235P-201ENST00000362644 107 ntBASIC3.61□□□□□ -1.83
SIX5Q8N196 Y_RNA.120-201ENST00000363304 110 ntBASIC3.61□□□□□ -1.83
SIX5Q8N196 Y_RNA.294-201ENST00000364916 102 ntBASIC3.61□□□□□ -1.83
SIX5Q8N196 SNORD21-201ENST00000383953 95 ntBASIC3.61□□□□□ -1.83
SIX5Q8N196 Y_RNA.563-201ENST00000384707 108 ntBASIC3.61□□□□□ -1.83
SIX5Q8N196 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SIX5Q8N196 S100A11P2-201ENST00000467589 312 ntBASIC3.61□□□□□ -1.83
SIX5Q8N196 RNA5SP341-201ENST00000516261 117 ntBASIC3.61□□□□□ -1.83
SIX5Q8N196 RNU7-149P-201ENST00000516739 59 ntBASIC3.61□□□□□ -1.83
SIX5Q8N196 AC244205.2-202ENST00000635781 342 ntBASIC3.61□□□□□ -1.83
SIX5Q8N196 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIX5Q8N196 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SIX5Q8N196 MIR184-201ENST00000384962 84 ntBASIC3.6□□□□□ -1.83
SIX5Q8N196 AL357552.1-201ENST00000445254 415 ntBASIC3.6□□□□□ -1.83
SIX5Q8N196 RPL39P40-201ENST00000445481 146 ntBASIC3.6□□□□□ -1.83
SIX5Q8N196 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX5Q8N196 SNORA18.4-201ENST00000516440 124 ntBASIC3.6□□□□□ -1.83
SIX5Q8N196 RN7SKP83-201ENST00000516512 178 ntBASIC3.6□□□□□ -1.83
SIX5Q8N196 AC097639.2-201ENST00000603159 172 ntBASIC3.6□□□□□ -1.83
SIX5Q8N196 AP003355.3-201ENST00000623465 114 ntBASIC3.6□□□□□ -1.83
SIX5Q8N196 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIX5Q8N196 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIX5Q8N196 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.6□□□□□ -1.83
SIX5Q8N196 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.6□□□□□ -1.83
SIX5Q8N196 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.6□□□□□ -1.83
SIX5Q8N196 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SIX5Q8N196 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.59□□□□□ -1.83
SIX5Q8N196 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.59□□□□□ -1.83
SIX5Q8N196 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SIX5Q8N196 snoU2-30.2-201ENST00000362805 70 ntBASIC3.59□□□□□ -1.83
SIX5Q8N196 MIR562-201ENST00000384894 95 ntBASIC3.59□□□□□ -1.83
SIX5Q8N196 SNORA48.8-201ENST00000391324 134 ntBASIC3.59□□□□□ -1.83
SIX5Q8N196 AL513477.1-202ENST00000417061 214 ntBASIC3.59□□□□□ -1.83
SIX5Q8N196 AC060773.1-201ENST00000421698 310 ntBASIC3.59□□□□□ -1.83
SIX5Q8N196 AC233266.1-201ENST00000454518 96 ntBASIC3.59□□□□□ -1.83
SIX5Q8N196 RN7SL429P-201ENST00000479090 223 ntBASIC3.59□□□□□ -1.83
SIX5Q8N196 RN7SL489P-201ENST00000486185 223 ntBASIC3.59□□□□□ -1.83
SIX5Q8N196 RN7SL327P-201ENST00000488659 223 ntBASIC3.59□□□□□ -1.83
SIX5Q8N196 FCF1P8-201ENST00000510322 597 ntBASIC3.59□□□□□ -1.83
SIX5Q8N196 AC011406.1-201ENST00000512440 370 ntBASIC3.59□□□□□ -1.83
SIX5Q8N196 RNU6-667P-201ENST00000517186 102 ntBASIC3.59□□□□□ -1.83
SIX5Q8N196 IGKV2-26-201ENST00000518305 343 ntBASIC3.59□□□□□ -1.83
SIX5Q8N196 MIR5004-201ENST00000579078 107 ntBASIC3.59□□□□□ -1.83
SIX5Q8N196 AC242852.1-201ENST00000612151 96 ntBASIC3.59□□□□□ -1.83
SIX5Q8N196 RN7SL853P-201ENST00000617250 223 ntBASIC3.59□□□□□ -1.83
SIX5Q8N196 AC244015.1-201ENST00000622301 99 ntBASIC3.59□□□□□ -1.83
SIX5Q8N196 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
SIX5Q8N196 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SIX5Q8N196 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
SIX5Q8N196 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.59□□□□□ -1.84
SIX5Q8N196 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SIX5Q8N196 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SIX5Q8N196 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SIX5Q8N196 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SIX5Q8N196 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SIX5Q8N196 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SIX5Q8N196 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SIX5Q8N196 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.58□□□□□ -1.84
SIX5Q8N196 SNORA80A-201ENST00000363922 136 ntBASIC3.58□□□□□ -1.84
SIX5Q8N196 RNU6-1138P-201ENST00000365359 106 ntBASIC3.58□□□□□ -1.84
SIX5Q8N196 Y_RNA.525-201ENST00000384570 113 ntBASIC3.58□□□□□ -1.84
SIX5Q8N196 RNU6-476P-201ENST00000384726 107 ntBASIC3.58□□□□□ -1.84
SIX5Q8N196 Y_RNA.712-201ENST00000517011 92 ntBASIC3.58□□□□□ -1.84
SIX5Q8N196 RNU6-365P-201ENST00000517113 106 ntBASIC3.58□□□□□ -1.84
SIX5Q8N196 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.58□□□□□ -1.84
SIX5Q8N196 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.58□□□□□ -1.84
SIX5Q8N196 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.58□□□□□ -1.84
SIX5Q8N196 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SIX5Q8N196 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SIX5Q8N196 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SIX5Q8N196 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SIX5Q8N196 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.57□□□□□ -1.84
SIX5Q8N196 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
SIX5Q8N196 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.57□□□□□ -1.84
SIX5Q8N196 MLLT10P1-201ENST00000418346 262 ntBASIC3.57□□□□□ -1.84
SIX5Q8N196 AC006539.3-201ENST00000454258 129 ntBASIC3.57□□□□□ -1.84
SIX5Q8N196 RNU5E-3P-201ENST00000515913 68 ntBASIC3.57□□□□□ -1.84
SIX5Q8N196 RNU6-772P-201ENST00000516042 105 ntBASIC3.57□□□□□ -1.84
SIX5Q8N196 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.57□□□□□ -1.84
SIX5Q8N196 AC133485.4-201ENST00000561835 220 ntBASIC3.57□□□□□ -1.84
SIX5Q8N196 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.57□□□□□ -1.84
SIX5Q8N196 AC138907.4-201ENST00000570107 226 ntBASIC3.57□□□□□ -1.84
SIX5Q8N196 MIR4276-201ENST00000584832 70 ntBASIC3.57□□□□□ -1.84
SIX5Q8N196 AL359075.3-201ENST00000613288 217 ntBASIC3.57□□□□□ -1.84
SIX5Q8N196 MAPK10-362ENST00000641864 4484 ntBASIC3.57□□□□□ -1.84
SIX5Q8N196 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
SIX5Q8N196 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
SIX5Q8N196 IPO8P1-201ENST00000455509 3109 ntBASIC3.56□□□□□ -1.84
SIX5Q8N196 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SIX5Q8N196 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms