Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC009161.1-201ENST00000417306 376 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 RAB28P5-201ENST00000427490 651 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 USP9YP16-201ENST00000430287 407 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 USP9YP23-201ENST00000455085 407 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 U8.22-201ENST00000459141 133 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 RPS27P22-201ENST00000478056 241 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 AC097462.1-201ENST00000514125 324 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 Y_RNA.682-201ENST00000516457 100 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 RNU1-54P-201ENST00000517181 120 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 AC105029.1-201ENST00000520250 669 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 AP002001.1-203ENST00000534002 267 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1□□□□□ -2.25
CCDC65Q8IXS2 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1□□□□□ -2.25
CCDC65Q8IXS2 AC136932.1-201ENST00000574771 208 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 MIR4790-201ENST00000577799 79 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 BNIP3P10-201ENST00000605360 577 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 AC100812.1-201ENST00000607622 580 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 AC106754.2-201ENST00000623006 233 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 SNORD3E-202ENST00000627253 216 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 MIR6079-201ENST00000635807 62 ntBASIC1□□□□□ -2.25
CCDC65Q8IXS2 RNU1-124P-201ENST00000363861 145 ntBASIC0.99□□□□□ -2.25
CCDC65Q8IXS2 Y_RNA.453-201ENST00000384223 109 ntBASIC0.99□□□□□ -2.25
CCDC65Q8IXS2 SNORA25-201ENST00000384384 134 ntBASIC0.99□□□□□ -2.25
CCDC65Q8IXS2 SNORD41-201ENST00000386967 70 ntBASIC0.99□□□□□ -2.25
CCDC65Q8IXS2 MIR190B-201ENST00000401119 79 ntBASIC0.99□□□□□ -2.25
CCDC65Q8IXS2 RNU7-94P-201ENST00000459576 63 ntBASIC0.99□□□□□ -2.25
CCDC65Q8IXS2 Y_RNA.706-201ENST00000516933 99 ntBASIC0.99□□□□□ -2.25
CCDC65Q8IXS2 AL121579.1-201ENST00000555129 305 ntBASIC0.99□□□□□ -2.25
CCDC65Q8IXS2 AC018638.8-201ENST00000588755 281 ntBASIC0.99□□□□□ -2.25
CCDC65Q8IXS2 AL513534.2-201ENST00000603836 250 ntBASIC0.99□□□□□ -2.25
CCDC65Q8IXS2 AL022345.2-201ENST00000606307 135 ntBASIC0.99□□□□□ -2.25
CCDC65Q8IXS2 AC099654.5-201ENST00000636479 350 ntBASIC0.99□□□□□ -2.25
CCDC65Q8IXS2 RNU6-424P-201ENST00000384367 105 ntBASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 Y_RNA.573-201ENST00000384763 105 ntBASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 MIR548K-201ENST00000408406 116 ntBASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 MTCO3P19-201ENST00000415864 321 ntBASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 STAG3L5P-204ENST00000443759 179 ntBASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 AC092989.1-201ENST00000481235 277 ntBASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 OR9P1P-201ENST00000496431 281 ntBASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 AC018710.1-201ENST00000506509 158 ntBASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 AC011352.1-201ENST00000512300 793 ntBASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 Y_RNA.670-201ENST00000516255 105 ntBASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 RNU6-107P-201ENST00000516643 102 ntBASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 RN7SKP49-201ENST00000516675 260 ntBASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 AC090617.3-201ENST00000573670 475 ntBASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 MIR4778-201ENST00000577635 80 ntBASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 AL162424.1-201ENST00000602325 221 ntBASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.98□□□□□ -2.25
CCDC65Q8IXS2 MIR410-201ENST00000362222 80 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 RNA5SP361-201ENST00000362686 118 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 SNORD114-27-201ENST00000363766 70 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 Y_RNA.339-201ENST00000365325 102 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 RNU6-1264P-201ENST00000383891 107 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 Y_RNA.557-201ENST00000384680 107 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 U8.16-201ENST00000391279 133 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 RNU6-1054P-201ENST00000411293 104 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 POLR2J4-204ENST00000418424 324 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 CALM2P4-201ENST00000430810 426 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 AC091021.1-201ENST00000468051 388 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 RNU6-917P-201ENST00000516294 104 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 RNA5SP168-201ENST00000516642 112 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 RNU6-922P-201ENST00000516753 99 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 RNU7-172P-201ENST00000517125 64 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 CYCSP23-201ENST00000519781 313 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 BX284668.6-201ENST00000606899 438 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 MIR6857-201ENST00000613267 93 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.97□□□□□ -2.25
CCDC65Q8IXS2 MIRLET7C-201ENST00000362160 84 ntBASIC0.96□□□□□ -2.26
CCDC65Q8IXS2 SNORA27.1-201ENST00000362604 124 ntBASIC0.96□□□□□ -2.26
CCDC65Q8IXS2 RNU6-454P-201ENST00000364292 107 ntBASIC0.96□□□□□ -2.26
CCDC65Q8IXS2 RNU4-76P-201ENST00000364509 141 ntBASIC0.96□□□□□ -2.26
CCDC65Q8IXS2 Y_RNA.364-201ENST00000365532 101 ntBASIC0.96□□□□□ -2.26
CCDC65Q8IXS2 RNU6-1215P-201ENST00000384441 102 ntBASIC0.96□□□□□ -2.26
CCDC65Q8IXS2 MIR222-201ENST00000384992 110 ntBASIC0.96□□□□□ -2.26
CCDC65Q8IXS2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
CCDC65Q8IXS2 Y_RNA.594-201ENST00000410373 140 ntBASIC0.96□□□□□ -2.26
CCDC65Q8IXS2 Y_RNA.638-201ENST00000459374 113 ntBASIC0.96□□□□□ -2.26
CCDC65Q8IXS2 AC080078.2-201ENST00000603766 501 ntBASIC0.96□□□□□ -2.26
CCDC65Q8IXS2 AC005828.6-201ENST00000606610 232 ntBASIC0.96□□□□□ -2.26
CCDC65Q8IXS2 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CCDC65Q8IXS2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
CCDC65Q8IXS2 RNU6-117P-201ENST00000365415 107 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 Y_RNA.363-201ENST00000365529 113 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 RNU6-318P-201ENST00000384283 103 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 RNU6-1050P-201ENST00000410388 107 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 RNU5A-5P-201ENST00000411054 116 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 AC018865.2-201ENST00000423631 129 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 AC048334.1-201ENST00000477975 159 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 AC069439.1-201ENST00000494739 167 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 RNA5SP20-201ENST00000515976 84 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 RNU6-113P-201ENST00000516653 101 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 RNU6-1016P-201ENST00000516689 94 ntBASIC0.95□□□□□ -2.26
CCDC65Q8IXS2 RNU6-341P-201ENST00000516973 96 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 349.5 ms