Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.59□□□□□ -2.15
PRPF39Q86UA1 AL135790.2-201ENST00000437701 267 ntBASIC1.59□□□□□ -2.15
PRPF39Q86UA1 Y_RNA.653-201ENST00000459091 95 ntBASIC1.59□□□□□ -2.15
PRPF39Q86UA1 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.59□□□□□ -2.15
PRPF39Q86UA1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.59□□□□□ -2.15
PRPF39Q86UA1 SNORA40.9-201ENST00000515895 93 ntBASIC1.59□□□□□ -2.15
PRPF39Q86UA1 RNU7-172P-201ENST00000517125 64 ntBASIC1.59□□□□□ -2.15
PRPF39Q86UA1 RNU6-902P-201ENST00000517212 91 ntBASIC1.59□□□□□ -2.15
PRPF39Q86UA1 RNU7-128P-201ENST00000517247 62 ntBASIC1.59□□□□□ -2.15
PRPF39Q86UA1 AL442163.3-201ENST00000554110 156 ntBASIC1.59□□□□□ -2.15
PRPF39Q86UA1 AC015688.6-201ENST00000577737 104 ntBASIC1.59□□□□□ -2.15
PRPF39Q86UA1 AC113139.1-201ENST00000605049 239 ntBASIC1.59□□□□□ -2.15
PRPF39Q86UA1 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.59□□□□□ -2.15
PRPF39Q86UA1 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.59□□□□□ -2.15
PRPF39Q86UA1 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.59□□□□□ -2.16
PRPF39Q86UA1 MIR302D-201ENST00000362275 68 ntBASIC1.58□□□□□ -2.16
PRPF39Q86UA1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.58□□□□□ -2.16
PRPF39Q86UA1 RNU1-42P-201ENST00000364033 160 ntBASIC1.58□□□□□ -2.16
PRPF39Q86UA1 RNU6-60P-201ENST00000364792 103 ntBASIC1.58□□□□□ -2.16
PRPF39Q86UA1 SNORA20B-201ENST00000384220 132 ntBASIC1.58□□□□□ -2.16
PRPF39Q86UA1 Y_RNA.577-201ENST00000384794 101 ntBASIC1.58□□□□□ -2.16
PRPF39Q86UA1 MIR194-1-201ENST00000384892 85 ntBASIC1.58□□□□□ -2.16
PRPF39Q86UA1 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
PRPF39Q86UA1 AL034345.1-201ENST00000407768 123 ntBASIC1.58□□□□□ -2.16
PRPF39Q86UA1 AC138393.2-201ENST00000414742 246 ntBASIC1.58□□□□□ -2.16
PRPF39Q86UA1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.58□□□□□ -2.16
PRPF39Q86UA1 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.58□□□□□ -2.16
PRPF39Q86UA1 AC027119.1-201ENST00000440877 241 ntBASIC1.58□□□□□ -2.16
PRPF39Q86UA1 SNORA20.3-201ENST00000516880 132 ntBASIC1.58□□□□□ -2.16
PRPF39Q86UA1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.58□□□□□ -2.16
PRPF39Q86UA1 AL021879.1-201ENST00000611756 288 ntBASIC1.58□□□□□ -2.16
PRPF39Q86UA1 AC021506.2-201ENST00000612354 169 ntBASIC1.58□□□□□ -2.16
PRPF39Q86UA1 MIR3674-201ENST00000636576 68 ntBASIC1.58□□□□□ -2.16
PRPF39Q86UA1 MTND5P10-201ENST00000603719 1809 ntBASIC1.58□□□□□ -2.16
PRPF39Q86UA1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.58□□□□□ -2.16
PRPF39Q86UA1 AC018630.2-201ENST00000534866 2403 ntBASIC1.57□□□□□ -2.16
PRPF39Q86UA1 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
PRPF39Q86UA1 MIR320A-201ENST00000385302 82 ntBASIC1.57□□□□□ -2.16
PRPF39Q86UA1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.57□□□□□ -2.16
PRPF39Q86UA1 RNU6-1156P-201ENST00000410365 100 ntBASIC1.57□□□□□ -2.16
PRPF39Q86UA1 MTCO3P19-201ENST00000415864 321 ntBASIC1.57□□□□□ -2.16
PRPF39Q86UA1 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.57□□□□□ -2.16
PRPF39Q86UA1 SNX2P2-201ENST00000424553 323 ntBASIC1.57□□□□□ -2.16
PRPF39Q86UA1 RAB28P5-201ENST00000427490 651 ntBASIC1.57□□□□□ -2.16
PRPF39Q86UA1 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.57□□□□□ -2.16
PRPF39Q86UA1 AC092473.1-201ENST00000441098 221 ntBASIC1.57□□□□□ -2.16
PRPF39Q86UA1 AC097462.1-201ENST00000514125 324 ntBASIC1.57□□□□□ -2.16
PRPF39Q86UA1 RNU6-120P-201ENST00000516077 103 ntBASIC1.57□□□□□ -2.16
PRPF39Q86UA1 SNORA31.10-201ENST00000516482 106 ntBASIC1.57□□□□□ -2.16
PRPF39Q86UA1 RNU7-4P-201ENST00000516961 62 ntBASIC1.57□□□□□ -2.16
PRPF39Q86UA1 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
PRPF39Q86UA1 BX248123.2-201ENST00000606318 124 ntBASIC1.57□□□□□ -2.16
PRPF39Q86UA1 AL355073.2-201ENST00000612106 557 ntBASIC1.57□□□□□ -2.16
PRPF39Q86UA1 MIR337-201ENST00000362281 93 ntBASIC1.56□□□□□ -2.16
PRPF39Q86UA1 RNU6-1301P-201ENST00000362724 104 ntBASIC1.56□□□□□ -2.16
PRPF39Q86UA1 RNU6-890P-201ENST00000384121 107 ntBASIC1.56□□□□□ -2.16
PRPF39Q86UA1 RNU6-318P-201ENST00000384283 103 ntBASIC1.56□□□□□ -2.16
PRPF39Q86UA1 RNU6-1297P-201ENST00000384415 104 ntBASIC1.56□□□□□ -2.16
PRPF39Q86UA1 AL355796.1-201ENST00000406706 323 ntBASIC1.56□□□□□ -2.16
PRPF39Q86UA1 MIR1323-201ENST00000408090 73 ntBASIC1.56□□□□□ -2.16
PRPF39Q86UA1 Y_RNA.605-201ENST00000410577 105 ntBASIC1.56□□□□□ -2.16
PRPF39Q86UA1 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.56□□□□□ -2.16
PRPF39Q86UA1 RNU7-95P-201ENST00000459222 64 ntBASIC1.56□□□□□ -2.16
PRPF39Q86UA1 RNA5SP20-201ENST00000515976 84 ntBASIC1.56□□□□□ -2.16
PRPF39Q86UA1 SUMO2P16-201ENST00000519475 264 ntBASIC1.56□□□□□ -2.16
PRPF39Q86UA1 AC144568.1-201ENST00000520139 137 ntBASIC1.56□□□□□ -2.16
PRPF39Q86UA1 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.56□□□□□ -2.16
PRPF39Q86UA1 AC005730.3-201ENST00000583067 366 ntBASIC1.56□□□□□ -2.16
PRPF39Q86UA1 AL645939.4-201ENST00000604495 135 ntBASIC1.56□□□□□ -2.16
PRPF39Q86UA1 AC080078.3-201ENST00000605407 463 ntBASIC1.56□□□□□ -2.16
PRPF39Q86UA1 Y_RNA.142-201ENST00000363491 102 ntBASIC1.55□□□□□ -2.16
PRPF39Q86UA1 Y_RNA.238-201ENST00000364441 102 ntBASIC1.55□□□□□ -2.16
PRPF39Q86UA1 Y_RNA.259-201ENST00000364619 101 ntBASIC1.55□□□□□ -2.16
PRPF39Q86UA1 Y_RNA.384-201ENST00000383909 102 ntBASIC1.55□□□□□ -2.16
PRPF39Q86UA1 RNU6-1310P-201ENST00000384153 107 ntBASIC1.55□□□□□ -2.16
PRPF39Q86UA1 RNU6-376P-201ENST00000384731 106 ntBASIC1.55□□□□□ -2.16
PRPF39Q86UA1 AC018865.2-201ENST00000423631 129 ntBASIC1.55□□□□□ -2.16
PRPF39Q86UA1 MTND4P28-201ENST00000426217 387 ntBASIC1.55□□□□□ -2.16
PRPF39Q86UA1 RBMX2P4-201ENST00000441256 376 ntBASIC1.55□□□□□ -2.16
PRPF39Q86UA1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.55□□□□□ -2.16
PRPF39Q86UA1 RNU7-169P-201ENST00000459456 61 ntBASIC1.55□□□□□ -2.16
PRPF39Q86UA1 AC099513.1-201ENST00000490423 301 ntBASIC1.55□□□□□ -2.16
PRPF39Q86UA1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.55□□□□□ -2.16
PRPF39Q86UA1 MIR4781-201ENST00000585250 76 ntBASIC1.55□□□□□ -2.16
PRPF39Q86UA1 AL162424.1-201ENST00000602325 221 ntBASIC1.55□□□□□ -2.16
PRPF39Q86UA1 AL359821.1-201ENST00000605519 182 ntBASIC1.55□□□□□ -2.16
PRPF39Q86UA1 AL365434.2-201ENST00000607979 234 ntBASIC1.55□□□□□ -2.16
PRPF39Q86UA1 AC025253.1-201ENST00000613623 543 ntBASIC1.55□□□□□ -2.16
PRPF39Q86UA1 MIR6079-201ENST00000635807 62 ntBASIC1.55□□□□□ -2.16
PRPF39Q86UA1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
PRPF39Q86UA1 RNU1-22P-201ENST00000363334 158 ntBASIC1.54□□□□□ -2.16
PRPF39Q86UA1 RPS27P16-201ENST00000425758 201 ntBASIC1.54□□□□□ -2.16
PRPF39Q86UA1 STAG3L5P-204ENST00000443759 179 ntBASIC1.54□□□□□ -2.16
PRPF39Q86UA1 PGBD4P5-201ENST00000445958 426 ntBASIC1.54□□□□□ -2.16
PRPF39Q86UA1 AC009474.2-201ENST00000451383 136 ntBASIC1.54□□□□□ -2.16
PRPF39Q86UA1 AC023790.1-201ENST00000482174 347 ntBASIC1.54□□□□□ -2.16
PRPF39Q86UA1 AC105758.1-201ENST00000506038 399 ntBASIC1.54□□□□□ -2.16
PRPF39Q86UA1 TRMT112P2-201ENST00000512910 132 ntBASIC1.54□□□□□ -2.16
PRPF39Q86UA1 RNU6-1278P-201ENST00000516130 107 ntBASIC1.54□□□□□ -2.16
PRPF39Q86UA1 RNU2-56P-201ENST00000516826 190 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms