Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RPL23AP83-201ENST00000434984 473 ntBASIC1.97□□□□□ -2.09
SHFQ7M4L6 HMGN2P34-201ENST00000437647 269 ntBASIC1.97□□□□□ -2.09
SHFQ7M4L6 POLR2KP2-201ENST00000438155 177 ntBASIC1.97□□□□□ -2.09
SHFQ7M4L6 ATP5J2P3-201ENST00000451550 258 ntBASIC1.97□□□□□ -2.09
SHFQ7M4L6 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.97□□□□□ -2.09
SHFQ7M4L6 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SHFQ7M4L6 Y_RNA.668-201ENST00000516233 93 ntBASIC1.97□□□□□ -2.09
SHFQ7M4L6 RNU6-1338P-201ENST00000516328 91 ntBASIC1.97□□□□□ -2.09
SHFQ7M4L6 SNORA31.25-201ENST00000517242 134 ntBASIC1.97□□□□□ -2.09
SHFQ7M4L6 SUMO2P18-201ENST00000518873 252 ntBASIC1.97□□□□□ -2.09
SHFQ7M4L6 AC027419.1-201ENST00000522976 328 ntBASIC1.97□□□□□ -2.09
SHFQ7M4L6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.97□□□□□ -2.09
SHFQ7M4L6 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.97□□□□□ -2.09
SHFQ7M4L6 MIR3145-201ENST00000580727 82 ntBASIC1.97□□□□□ -2.09
SHFQ7M4L6 DEFB117-201ENST00000602356 141 ntBASIC1.97□□□□□ -2.09
SHFQ7M4L6 MIR338-201ENST00000636369 67 ntBASIC1.97□□□□□ -2.09
SHFQ7M4L6 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.97□□□□□ -2.09
SHFQ7M4L6 SNORA27.1-201ENST00000362604 124 ntBASIC1.96□□□□□ -2.1
SHFQ7M4L6 RNA5SP160-201ENST00000364866 120 ntBASIC1.96□□□□□ -2.1
SHFQ7M4L6 RNA5SP138-201ENST00000365098 114 ntBASIC1.96□□□□□ -2.1
SHFQ7M4L6 Y_RNA.418-201ENST00000384029 102 ntBASIC1.96□□□□□ -2.1
SHFQ7M4L6 Y_RNA.569-201ENST00000384749 103 ntBASIC1.96□□□□□ -2.1
SHFQ7M4L6 MIR597-201ENST00000384968 97 ntBASIC1.96□□□□□ -2.1
SHFQ7M4L6 MIR221-201ENST00000385135 110 ntBASIC1.96□□□□□ -2.1
SHFQ7M4L6 RNU2-61P-201ENST00000411069 191 ntBASIC1.96□□□□□ -2.1
SHFQ7M4L6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.96□□□□□ -2.1
SHFQ7M4L6 AL049873.1-201ENST00000480540 376 ntBASIC1.96□□□□□ -2.1
SHFQ7M4L6 AC008413.1-201ENST00000511864 177 ntBASIC1.96□□□□□ -2.1
SHFQ7M4L6 RNA5SP200-201ENST00000516360 103 ntBASIC1.96□□□□□ -2.1
SHFQ7M4L6 AL353149.1-201ENST00000610667 244 ntBASIC1.96□□□□□ -2.1
SHFQ7M4L6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.96□□□□□ -2.1
SHFQ7M4L6 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SHFQ7M4L6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
SHFQ7M4L6 Y_RNA.237-201ENST00000364439 102 ntBASIC1.95□□□□□ -2.1
SHFQ7M4L6 Y_RNA.556-201ENST00000384677 113 ntBASIC1.95□□□□□ -2.1
SHFQ7M4L6 RNU6-417P-201ENST00000384712 107 ntBASIC1.95□□□□□ -2.1
SHFQ7M4L6 SNORA40.19-201ENST00000390846 128 ntBASIC1.95□□□□□ -2.1
SHFQ7M4L6 RNU11-3P-201ENST00000391111 133 ntBASIC1.95□□□□□ -2.1
SHFQ7M4L6 MIR873-201ENST00000401120 77 ntBASIC1.95□□□□□ -2.1
SHFQ7M4L6 MIR1253-201ENST00000408273 105 ntBASIC1.95□□□□□ -2.1
SHFQ7M4L6 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.95□□□□□ -2.1
SHFQ7M4L6 HMGN2P3-201ENST00000433603 273 ntBASIC1.95□□□□□ -2.1
SHFQ7M4L6 AC099677.2-201ENST00000436385 175 ntBASIC1.95□□□□□ -2.1
SHFQ7M4L6 HMGN2P5-201ENST00000436882 273 ntBASIC1.95□□□□□ -2.1
SHFQ7M4L6 AL021397.1-201ENST00000451806 248 ntBASIC1.95□□□□□ -2.1
SHFQ7M4L6 SUMO1P2-201ENST00000452524 304 ntBASIC1.95□□□□□ -2.1
SHFQ7M4L6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.95□□□□□ -2.1
SHFQ7M4L6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.95□□□□□ -2.1
SHFQ7M4L6 YWHAEP4-201ENST00000505390 198 ntBASIC1.95□□□□□ -2.1
SHFQ7M4L6 AP005660.1-201ENST00000522972 293 ntBASIC1.95□□□□□ -2.1
SHFQ7M4L6 DEFB108E-201ENST00000524692 240 ntBASIC1.95□□□□□ -2.1
SHFQ7M4L6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.95□□□□□ -2.1
SHFQ7M4L6 AC023157.2-201ENST00000540596 141 ntBASIC1.95□□□□□ -2.1
SHFQ7M4L6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.95□□□□□ -2.1
SHFQ7M4L6 MIR5002-201ENST00000584713 97 ntBASIC1.95□□□□□ -2.1
SHFQ7M4L6 AC006435.5-201ENST00000624486 112 ntBASIC1.95□□□□□ -2.1
SHFQ7M4L6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
SHFQ7M4L6 SNORD114-7-201ENST00000362520 77 ntBASIC1.94□□□□□ -2.1
SHFQ7M4L6 RNU4-80P-201ENST00000363200 141 ntBASIC1.94□□□□□ -2.1
SHFQ7M4L6 Y_RNA.136-201ENST00000363444 102 ntBASIC1.94□□□□□ -2.1
SHFQ7M4L6 RNU6-702P-201ENST00000364982 107 ntBASIC1.94□□□□□ -2.1
SHFQ7M4L6 RNU6-407P-201ENST00000365280 104 ntBASIC1.94□□□□□ -2.1
SHFQ7M4L6 RNU6-505P-201ENST00000384427 107 ntBASIC1.94□□□□□ -2.1
SHFQ7M4L6 RNA5SP465-201ENST00000391195 109 ntBASIC1.94□□□□□ -2.1
SHFQ7M4L6 RNU2-40P-201ENST00000410833 196 ntBASIC1.94□□□□□ -2.1
SHFQ7M4L6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SHFQ7M4L6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.94□□□□□ -2.1
SHFQ7M4L6 RNU2-31P-201ENST00000516954 155 ntBASIC1.94□□□□□ -2.1
SHFQ7M4L6 uc_338.20-201ENST00000621563 178 ntBASIC1.94□□□□□ -2.1
SHFQ7M4L6 U6.104-201ENST00000637979 90 ntBASIC1.94□□□□□ -2.1
SHFQ7M4L6 MTND5P6-201ENST00000422338 1798 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 AL391987.6-201ENST00000305671 199 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SHFQ7M4L6 RNU6-862P-201ENST00000362804 105 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 SNORA33-201ENST00000363664 130 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 Y_RNA.288-201ENST00000364854 92 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 RNU6-326P-201ENST00000365480 107 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 RNU2-38P-201ENST00000410856 79 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 MTCO1P5-201ENST00000433573 344 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 SNORD127-201ENST00000458892 86 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 RPS26P55-201ENST00000471178 356 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 RPS27P21-201ENST00000486977 252 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 SERF1AP1-201ENST00000514575 187 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 RNA5SP20-201ENST00000515976 84 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 RNU6-1146P-201ENST00000516282 102 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 RNA5SP281-201ENST00000516504 135 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 SCARNA24.2-201ENST00000516968 130 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 AC004817.2-201ENST00000561794 651 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 AC009127.3-201ENST00000570531 403 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 AC005786.1-201ENST00000588553 154 ntBASIC1.93□□□□□ -2.1
SHFQ7M4L6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
SHFQ7M4L6 AL359851.1-201ENST00000569460 4997 ntBASIC1.92□□□□□ -2.1
SHFQ7M4L6 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.92□□□□□ -2.1
SHFQ7M4L6 CENPCP1-201ENST00000533085 2578 ntBASIC1.92□□□□□ -2.1
SHFQ7M4L6 MIR335-201ENST00000362173 94 ntBASIC1.92□□□□□ -2.1
SHFQ7M4L6 RNU6-271P-201ENST00000363858 105 ntBASIC1.92□□□□□ -2.1
SHFQ7M4L6 SNORA53-201ENST00000391141 249 ntBASIC1.92□□□□□ -2.1
SHFQ7M4L6 RNA5SP467-201ENST00000391274 118 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 172.3 ms