Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 snoU2-30.2-201ENST00000362805 70 ntBASIC-1.5□□□□□ -2.65
VPS13CQ709C8 RNA5SP405-201ENST00000363059 114 ntBASIC-1.5□□□□□ -2.65
VPS13CQ709C8 AL355143.1-201ENST00000407101 841 ntBASIC-1.5□□□□□ -2.65
VPS13CQ709C8 AL671309.1-201ENST00000603750 544 ntBASIC-1.5□□□□□ -2.65
VPS13CQ709C8 AC018889.1-201ENST00000605372 397 ntBASIC-1.5□□□□□ -2.65
VPS13CQ709C8 AC073869.9-201ENST00000641610 120 ntBASIC-1.5□□□□□ -2.65
VPS13CQ709C8 MIR125B2-201ENST00000385128 89 ntBASIC-1.51□□□□□ -2.65
VPS13CQ709C8 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-1.51□□□□□ -2.65
VPS13CQ709C8 AL606834.3-201ENST00000602615 496 ntBASIC-1.51□□□□□ -2.65
VPS13CQ709C8 AC244669.1-204ENST00000621564 178 ntBASIC-1.51□□□□□ -2.65
VPS13CQ709C8 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-1.51□□□□□ -2.65
VPS13CQ709C8 MIR526A1-201ENST00000384897 85 ntBASIC-1.51□□□□□ -2.65
VPS13CQ709C8 SNORD65-201ENST00000391079 73 ntBASIC-1.51□□□□□ -2.65
VPS13CQ709C8 MIR4639-201ENST00000584938 69 ntBASIC-1.51□□□□□ -2.65
VPS13CQ709C8 SNORA2.1-201ENST00000363089 137 ntBASIC-1.51□□□□□ -2.65
VPS13CQ709C8 SNORD114-29-201ENST00000364819 70 ntBASIC-1.51□□□□□ -2.65
VPS13CQ709C8 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-1.51□□□□□ -2.65
VPS13CQ709C8 HGF-207ENST00000453018 721 ntTSL 3 BASIC-1.51□□□□□ -2.65
VPS13CQ709C8 RNU6-488P-201ENST00000515918 99 ntBASIC-1.51□□□□□ -2.65
VPS13CQ709C8 AC245014.2-201ENST00000603689 287 ntBASIC-1.51□□□□□ -2.65
VPS13CQ709C8 RNU6-580P-201ENST00000365159 107 ntBASIC-1.52□□□□□ -2.65
VPS13CQ709C8 Y_RNA.370-201ENST00000365589 108 ntBASIC-1.52□□□□□ -2.65
VPS13CQ709C8 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-1.52□□□□□ -2.65
VPS13CQ709C8 snoU13.14-201ENST00000459372 104 ntBASIC-1.52□□□□□ -2.65
VPS13CQ709C8 SNORA70.25-201ENST00000612741 95 ntBASIC-1.52□□□□□ -2.65
VPS13CQ709C8 RMST_5.1-201ENST00000618704 126 ntBASIC-1.52□□□□□ -2.65
VPS13CQ709C8 SNORA26.5-201ENST00000391215 123 ntBASIC-1.52□□□□□ -2.65
VPS13CQ709C8 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-1.52□□□□□ -2.65
VPS13CQ709C8 GPM6BP2-201ENST00000432046 144 ntBASIC-1.52□□□□□ -2.65
VPS13CQ709C8 GPM6BP1-201ENST00000446387 144 ntBASIC-1.52□□□□□ -2.65
VPS13CQ709C8 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC-1.52□□□□□ -2.65
VPS13CQ709C8 RNU6-1146P-201ENST00000516282 102 ntBASIC-1.52□□□□□ -2.65
VPS13CQ709C8 AC074085.1-201ENST00000413598 418 ntBASIC-1.52□□□□□ -2.65
VPS13CQ709C8 RNU6-412P-201ENST00000516434 106 ntBASIC-1.52□□□□□ -2.65
VPS13CQ709C8 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-1.52□□□□□ -2.65
VPS13CQ709C8 RNU1-29P-201ENST00000606574 126 ntBASIC-1.52□□□□□ -2.65
VPS13CQ709C8 RNU6-697P-201ENST00000363348 107 ntBASIC-1.53□□□□□ -2.65
VPS13CQ709C8 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.53□□□□□ -2.65
VPS13CQ709C8 RNU6-900P-201ENST00000384498 102 ntBASIC-1.53□□□□□ -2.65
VPS13CQ709C8 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.53□□□□□ -2.65
VPS13CQ709C8 MIR649-201ENST00000384843 97 ntBASIC-1.53□□□□□ -2.65
VPS13CQ709C8 MIR516B1-201ENST00000385211 90 ntBASIC-1.53□□□□□ -2.65
VPS13CQ709C8 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-1.53□□□□□ -2.65
VPS13CQ709C8 AC010486.3-201ENST00000511602 785 ntBASIC-1.53□□□□□ -2.65
VPS13CQ709C8 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-1.53□□□□□ -2.65
VPS13CQ709C8 RNU6-511P-201ENST00000363496 107 ntBASIC-1.53□□□□□ -2.65
VPS13CQ709C8 SNORD114-17-201ENST00000364699 75 ntBASIC-1.53□□□□□ -2.65
VPS13CQ709C8 RNU6-441P-201ENST00000384545 106 ntBASIC-1.53□□□□□ -2.65
VPS13CQ709C8 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.53□□□□□ -2.65
VPS13CQ709C8 CDK8P2-201ENST00000415020 547 ntBASIC-1.53□□□□□ -2.65
VPS13CQ709C8 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.53□□□□□ -2.65
VPS13CQ709C8 AL356094.1-201ENST00000624663 1212 ntBASIC-1.53□□□□□ -2.65
VPS13CQ709C8 SNORD32B-201ENST00000364460 84 ntBASIC-1.54□□□□□ -2.66
VPS13CQ709C8 Y_RNA.482-201ENST00000384377 111 ntBASIC-1.54□□□□□ -2.66
VPS13CQ709C8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-1.54□□□□□ -2.66
VPS13CQ709C8 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC-1.54□□□□□ -2.66
VPS13CQ709C8 RNU7-41P-201ENST00000515917 61 ntBASIC-1.54□□□□□ -2.66
VPS13CQ709C8 MIR6854-201ENST00000614935 69 ntBASIC-1.54□□□□□ -2.66
VPS13CQ709C8 SNORD24-201ENST00000383884 75 ntBASIC-1.54□□□□□ -2.66
VPS13CQ709C8 SNORA25.16-201ENST00000516741 121 ntBASIC-1.54□□□□□ -2.66
VPS13CQ709C8 RNU6-410P-201ENST00000517006 107 ntBASIC-1.54□□□□□ -2.66
VPS13CQ709C8 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC-1.54□□□□□ -2.66
VPS13CQ709C8 MIR340-201ENST00000362125 95 ntBASIC-1.54□□□□□ -2.66
VPS13CQ709C8 TRIM60P5Y-201ENST00000413946 574 ntBASIC-1.54□□□□□ -2.66
VPS13CQ709C8 AC245047.3-201ENST00000429428 127 ntBASIC-1.54□□□□□ -2.66
VPS13CQ709C8 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.54□□□□□ -2.66
VPS13CQ709C8 AP000676.1-201ENST00000533307 52 ntBASIC-1.54□□□□□ -2.66
VPS13CQ709C8 AP001330.5-201ENST00000607176 411 ntBASIC-1.54□□□□□ -2.66
VPS13CQ709C8 SUMO1P3-201ENST00000439961 304 ntBASIC-1.55□□□□□ -2.66
VPS13CQ709C8 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC-1.55□□□□□ -2.66
VPS13CQ709C8 AC108019.1-201ENST00000512540 175 ntBASIC-1.55□□□□□ -2.66
VPS13CQ709C8 RNU6-856P-201ENST00000516959 98 ntBASIC-1.55□□□□□ -2.66
VPS13CQ709C8 RNU6-840P-201ENST00000517275 65 ntBASIC-1.55□□□□□ -2.66
VPS13CQ709C8 AC022217.4-201ENST00000604389 163 ntBASIC-1.55□□□□□ -2.66
VPS13CQ709C8 RNU6-466P-201ENST00000391224 103 ntBASIC-1.55□□□□□ -2.66
VPS13CQ709C8 MTCO3P40-201ENST00000392516 676 ntBASIC-1.55□□□□□ -2.66
VPS13CQ709C8 ZNF736P7Y-201ENST00000425158 820 ntBASIC-1.55□□□□□ -2.66
VPS13CQ709C8 AC091163.3-201ENST00000518269 1144 ntBASIC-1.55□□□□□ -2.66
VPS13CQ709C8 AP001189.2-201ENST00000527320 189 ntBASIC-1.55□□□□□ -2.66
VPS13CQ709C8 AP002371.2-201ENST00000624450 503 ntBASIC-1.55□□□□□ -2.66
VPS13CQ709C8 SNORA32.2-201ENST00000384049 122 ntBASIC-1.55□□□□□ -2.66
VPS13CQ709C8 MTND3P20-201ENST00000407663 186 ntBASIC-1.55□□□□□ -2.66
VPS13CQ709C8 USP9YP12-201ENST00000450481 570 ntBASIC-1.55□□□□□ -2.66
VPS13CQ709C8 RNU7-43P-201ENST00000516554 64 ntBASIC-1.55□□□□□ -2.66
VPS13CQ709C8 RNA5SP47-201ENST00000517230 109 ntBASIC-1.55□□□□□ -2.66
VPS13CQ709C8 RNU6-1229P-201ENST00000364295 107 ntBASIC-1.56□□□□□ -2.66
VPS13CQ709C8 CCDC58P2-201ENST00000417131 366 ntBASIC-1.56□□□□□ -2.66
VPS13CQ709C8 AC068135.1-201ENST00000446164 246 ntBASIC-1.56□□□□□ -2.66
VPS13CQ709C8 AC006927.4-201ENST00000639187 543 ntBASIC-1.56□□□□□ -2.66
VPS13CQ709C8 RNU6-212P-201ENST00000362642 104 ntBASIC-1.56□□□□□ -2.66
VPS13CQ709C8 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
VPS13CQ709C8 AL451054.2-201ENST00000420896 202 ntBASIC-1.56□□□□□ -2.66
VPS13CQ709C8 RNU7-12P-201ENST00000516030 62 ntBASIC-1.56□□□□□ -2.66
VPS13CQ709C8 RNU5F-4P-201ENST00000516581 114 ntBASIC-1.56□□□□□ -2.66
VPS13CQ709C8 SNORA25.17-201ENST00000517184 124 ntBASIC-1.56□□□□□ -2.66
VPS13CQ709C8 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.56□□□□□ -2.66
VPS13CQ709C8 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC-1.56□□□□□ -2.66
VPS13CQ709C8 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-1.56□□□□□ -2.66
VPS13CQ709C8 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.56□□□□□ -2.66
VPS13CQ709C8 MIR29B1-201ENST00000385015 81 ntBASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms