Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 RNU2-61P-201ENST00000411069 191 ntBASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 RPL23AP42-201ENST00000471152 471 ntBASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 RPS26P55-201ENST00000471178 356 ntBASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 RNU6-496P-201ENST00000516145 99 ntBASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 RNU7-110P-201ENST00000516891 62 ntBASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 SNORA31.17-201ENST00000516953 127 ntBASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 MIR4435-1-201ENST00000582552 80 ntBASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 MIR4438-201ENST00000585271 93 ntBASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 AC136443.5-201ENST00000603741 370 ntBASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 MIR6817-201ENST00000615588 66 ntBASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
PPP4R4Q6NUP7 MTND5P6-201ENST00000422338 1798 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 MIR449A-201ENST00000362113 91 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 Y_RNA.19-201ENST00000362462 99 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 RNU1-22P-201ENST00000363334 158 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 SNORD113-8-201ENST00000363497 74 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 Y_RNA.222-201ENST00000364264 102 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 SNORA63D-201ENST00000364359 132 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 RNU6-117P-201ENST00000365415 107 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 Y_RNA.512-201ENST00000384518 102 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 MIR215-201ENST00000384858 110 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 RNU6-1109P-201ENST00000391187 107 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 AL390729.2-201ENST00000416137 156 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 AL118496.2-201ENST00000448300 230 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 MTND5P22-201ENST00000458380 195 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 RPS26P45-201ENST00000471748 340 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 AC097462.1-201ENST00000514125 324 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 RNU6-327P-201ENST00000516270 127 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 RNA5SP148-201ENST00000516527 94 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 MIR514B-201ENST00000516774 80 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 AC024995.1-201ENST00000523014 93 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 AL137100.2-201ENST00000555786 315 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 AC006380.1-201ENST00000603598 186 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 AC103810.8-201ENST00000607347 118 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 AC127459.3-201ENST00000624328 466 ntBASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.31□□□□□ -2.04
PPP4R4Q6NUP7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
PPP4R4Q6NUP7 SNORD114-7-201ENST00000362520 77 ntBASIC2.3□□□□□ -2.04
PPP4R4Q6NUP7 Y_RNA.162-201ENST00000363683 102 ntBASIC2.3□□□□□ -2.04
PPP4R4Q6NUP7 RNU6-407P-201ENST00000365280 104 ntBASIC2.3□□□□□ -2.04
PPP4R4Q6NUP7 RNU6-301P-201ENST00000384277 107 ntBASIC2.3□□□□□ -2.04
PPP4R4Q6NUP7 MIR520A-201ENST00000384862 85 ntBASIC2.3□□□□□ -2.04
PPP4R4Q6NUP7 Y_RNA.581-201ENST00000391017 97 ntBASIC2.3□□□□□ -2.04
PPP4R4Q6NUP7 EBAG9P1-201ENST00000418955 543 ntBASIC2.3□□□□□ -2.04
PPP4R4Q6NUP7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.3□□□□□ -2.04
PPP4R4Q6NUP7 AL358176.2-201ENST00000425769 204 ntBASIC2.3□□□□□ -2.04
PPP4R4Q6NUP7 AL606517.2-201ENST00000442855 241 ntBASIC2.3□□□□□ -2.04
PPP4R4Q6NUP7 AL513328.1-201ENST00000446460 224 ntBASIC2.3□□□□□ -2.04
PPP4R4Q6NUP7 SUMO1P2-201ENST00000452524 304 ntBASIC2.3□□□□□ -2.04
PPP4R4Q6NUP7 RPL23AP63-201ENST00000498752 471 ntBASIC2.3□□□□□ -2.04
PPP4R4Q6NUP7 RNA5SP20-201ENST00000515976 84 ntBASIC2.3□□□□□ -2.04
PPP4R4Q6NUP7 AL117187.1-201ENST00000555482 181 ntBASIC2.3□□□□□ -2.04
PPP4R4Q6NUP7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.3□□□□□ -2.04
PPP4R4Q6NUP7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.3□□□□□ -2.04
PPP4R4Q6NUP7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PPP4R4Q6NUP7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PPP4R4Q6NUP7 Y_RNA.329-201ENST00000365209 107 ntBASIC2.29□□□□□ -2.04
PPP4R4Q6NUP7 MIR676-201ENST00000390702 67 ntBASIC2.29□□□□□ -2.04
PPP4R4Q6NUP7 HMGN2P19-201ENST00000425149 265 ntBASIC2.29□□□□□ -2.04
PPP4R4Q6NUP7 AC069257.2-201ENST00000441819 155 ntBASIC2.29□□□□□ -2.04
PPP4R4Q6NUP7 AL731563.1-201ENST00000442202 214 ntBASIC2.29□□□□□ -2.04
PPP4R4Q6NUP7 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.29□□□□□ -2.04
PPP4R4Q6NUP7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.29□□□□□ -2.04
PPP4R4Q6NUP7 RPS27P22-201ENST00000478056 241 ntBASIC2.29□□□□□ -2.04
PPP4R4Q6NUP7 RNY3P15-201ENST00000516297 97 ntBASIC2.29□□□□□ -2.04
PPP4R4Q6NUP7 SNORA40.15-201ENST00000516884 107 ntBASIC2.29□□□□□ -2.04
PPP4R4Q6NUP7 RNA5SP437-201ENST00000517249 129 ntBASIC2.29□□□□□ -2.04
PPP4R4Q6NUP7 DEFB117-201ENST00000602356 141 ntBASIC2.29□□□□□ -2.04
PPP4R4Q6NUP7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.29□□□□□ -2.04
PPP4R4Q6NUP7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.29□□□□□ -2.04
PPP4R4Q6NUP7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
PPP4R4Q6NUP7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.28□□□□□ -2.04
PPP4R4Q6NUP7 Y_RNA.152-201ENST00000363578 100 ntBASIC2.28□□□□□ -2.04
PPP4R4Q6NUP7 Y_RNA.172-201ENST00000363765 102 ntBASIC2.28□□□□□ -2.04
PPP4R4Q6NUP7 RNA5SP68-201ENST00000363885 119 ntBASIC2.28□□□□□ -2.04
PPP4R4Q6NUP7 RNU6-505P-201ENST00000384427 107 ntBASIC2.28□□□□□ -2.04
PPP4R4Q6NUP7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
PPP4R4Q6NUP7 Y_RNA.602-201ENST00000410535 92 ntBASIC2.28□□□□□ -2.04
PPP4R4Q6NUP7 AC018634.1-201ENST00000437554 401 ntBASIC2.28□□□□□ -2.04
PPP4R4Q6NUP7 RPS27P1-201ENST00000450552 247 ntBASIC2.28□□□□□ -2.04
PPP4R4Q6NUP7 TRBV12-1-201ENST00000479785 344 ntBASIC2.28□□□□□ -2.04
PPP4R4Q6NUP7 AL163195.1-201ENST00000496941 348 ntBASIC2.28□□□□□ -2.04
PPP4R4Q6NUP7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.28□□□□□ -2.04
PPP4R4Q6NUP7 SNORD113-5-201ENST00000607261 78 ntBASIC2.28□□□□□ -2.04
PPP4R4Q6NUP7 AL359075.3-201ENST00000613288 217 ntBASIC2.28□□□□□ -2.04
PPP4R4Q6NUP7 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.28□□□□□ -2.04
PPP4R4Q6NUP7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
PPP4R4Q6NUP7 RNU6-661P-201ENST00000362409 107 ntBASIC2.27□□□□□ -2.05
PPP4R4Q6NUP7 RNU6-271P-201ENST00000363858 105 ntBASIC2.27□□□□□ -2.05
PPP4R4Q6NUP7 RNU6-21P-201ENST00000384710 107 ntBASIC2.27□□□□□ -2.05
PPP4R4Q6NUP7 RNU6-1105P-201ENST00000384774 107 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 223.5 ms