Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.87□□□□□ -1.79
RNF20Q5VTR2 Y_RNA.649-201ENST00000459077 103 ntBASIC3.87□□□□□ -1.79
RNF20Q5VTR2 SNORA84-201ENST00000459229 133 ntBASIC3.87□□□□□ -1.79
RNF20Q5VTR2 Y_RNA.651-201ENST00000459380 103 ntBASIC3.87□□□□□ -1.79
RNF20Q5VTR2 RN7SL807P-201ENST00000470923 297 ntBASIC3.87□□□□□ -1.79
RNF20Q5VTR2 RNA5SP217-201ENST00000515959 91 ntBASIC3.87□□□□□ -1.79
RNF20Q5VTR2 RN7SKP19-201ENST00000516016 252 ntBASIC3.87□□□□□ -1.79
RNF20Q5VTR2 RNU1-104P-201ENST00000517280 175 ntBASIC3.87□□□□□ -1.79
RNF20Q5VTR2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
RNF20Q5VTR2 AC091178.2-201ENST00000584401 117 ntBASIC3.87□□□□□ -1.79
RNF20Q5VTR2 AL022345.2-201ENST00000606307 135 ntBASIC3.87□□□□□ -1.79
RNF20Q5VTR2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
RNF20Q5VTR2 AC110079.1-202ENST00000635213 138 ntBASIC3.87□□□□□ -1.79
RNF20Q5VTR2 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
RNF20Q5VTR2 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RNF20Q5VTR2 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RNF20Q5VTR2 AC091564.4-201ENST00000533934 2194 ntBASIC3.86□□□□□ -1.79
RNF20Q5VTR2 MIR148B-201ENST00000362252 99 ntBASIC3.86□□□□□ -1.79
RNF20Q5VTR2 SNORD56.3-201ENST00000363507 71 ntBASIC3.86□□□□□ -1.79
RNF20Q5VTR2 SNORA26-201ENST00000391286 122 ntBASIC3.86□□□□□ -1.79
RNF20Q5VTR2 RPL32P35-201ENST00000415214 394 ntBASIC3.86□□□□□ -1.79
RNF20Q5VTR2 RPS29P21-201ENST00000496272 170 ntBASIC3.86□□□□□ -1.79
RNF20Q5VTR2 OR9P1P-201ENST00000496431 281 ntBASIC3.86□□□□□ -1.79
RNF20Q5VTR2 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.86□□□□□ -1.79
RNF20Q5VTR2 AC025166.1-201ENST00000612411 163 ntBASIC3.86□□□□□ -1.79
RNF20Q5VTR2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RNF20Q5VTR2 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF20Q5VTR2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RNF20Q5VTR2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RNF20Q5VTR2 MIR450A1-201ENST00000362262 91 ntBASIC3.85□□□□□ -1.79
RNF20Q5VTR2 RNA5SP119-201ENST00000362715 117 ntBASIC3.85□□□□□ -1.79
RNF20Q5VTR2 MIR562-201ENST00000384894 95 ntBASIC3.85□□□□□ -1.79
RNF20Q5VTR2 MIR218-1-201ENST00000384999 110 ntBASIC3.85□□□□□ -1.79
RNF20Q5VTR2 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.85□□□□□ -1.79
RNF20Q5VTR2 U6atac.2-201ENST00000408644 118 ntBASIC3.85□□□□□ -1.79
RNF20Q5VTR2 RNA5SP490-201ENST00000517141 136 ntBASIC3.85□□□□□ -1.79
RNF20Q5VTR2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.85□□□□□ -1.79
RNF20Q5VTR2 AC090115.4-201ENST00000609970 188 ntBASIC3.85□□□□□ -1.79
RNF20Q5VTR2 JPX_2.1-201ENST00000614161 69 ntBASIC3.85□□□□□ -1.79
RNF20Q5VTR2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.85□□□□□ -1.79
RNF20Q5VTR2 AC002064.3-201ENST00000623448 346 ntBASIC3.85□□□□□ -1.79
RNF20Q5VTR2 AC009487.4-201ENST00000624969 3585 ntBASIC3.85□□□□□ -1.79
RNF20Q5VTR2 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF20Q5VTR2 Y_RNA.346-201ENST00000365385 112 ntBASIC3.84□□□□□ -1.79
RNF20Q5VTR2 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNF20Q5VTR2 RNA5SP127-201ENST00000411051 133 ntBASIC3.84□□□□□ -1.79
RNF20Q5VTR2 Y_RNA.621-201ENST00000411065 96 ntBASIC3.84□□□□□ -1.79
RNF20Q5VTR2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF20Q5VTR2 AC063976.3-201ENST00000426849 329 ntBASIC3.84□□□□□ -1.79
RNF20Q5VTR2 SNORA72.7-201ENST00000516349 94 ntBASIC3.84□□□□□ -1.79
RNF20Q5VTR2 AC245166.1-201ENST00000521012 253 ntBASIC3.84□□□□□ -1.79
RNF20Q5VTR2 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.84□□□□□ -1.79
RNF20Q5VTR2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.84□□□□□ -1.79
RNF20Q5VTR2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.84□□□□□ -1.79
RNF20Q5VTR2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.84□□□□□ -1.79
RNF20Q5VTR2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
RNF20Q5VTR2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
RNF20Q5VTR2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.84□□□□□ -1.8
RNF20Q5VTR2 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.83□□□□□ -1.8
RNF20Q5VTR2 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.83□□□□□ -1.8
RNF20Q5VTR2 RNU1-143P-201ENST00000516296 146 ntBASIC3.83□□□□□ -1.8
RNF20Q5VTR2 RNU6-365P-201ENST00000517113 106 ntBASIC3.83□□□□□ -1.8
RNF20Q5VTR2 AC007751.1-201ENST00000529260 376 ntBASIC3.83□□□□□ -1.8
RNF20Q5VTR2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.83□□□□□ -1.8
RNF20Q5VTR2 PRELID2P1-201ENST00000552837 301 ntBASIC3.83□□□□□ -1.8
RNF20Q5VTR2 MIR3129-201ENST00000581095 76 ntBASIC3.83□□□□□ -1.8
RNF20Q5VTR2 AC008739.3-201ENST00000603262 127 ntBASIC3.83□□□□□ -1.8
RNF20Q5VTR2 U1.23-201ENST00000610293 146 ntBASIC3.83□□□□□ -1.8
RNF20Q5VTR2 RNU1-68P-201ENST00000615382 146 ntBASIC3.83□□□□□ -1.8
RNF20Q5VTR2 U1.39-201ENST00000621562 146 ntBASIC3.83□□□□□ -1.8
RNF20Q5VTR2 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
RNF20Q5VTR2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
RNF20Q5VTR2 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.82□□□□□ -1.8
RNF20Q5VTR2 MTND5P18-201ENST00000445624 1801 ntBASIC3.82□□□□□ -1.8
RNF20Q5VTR2 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RNF20Q5VTR2 RNU6-1138P-201ENST00000365359 106 ntBASIC3.82□□□□□ -1.8
RNF20Q5VTR2 RNU6-880P-201ENST00000384526 107 ntBASIC3.82□□□□□ -1.8
RNF20Q5VTR2 MIR183-201ENST00000384958 110 ntBASIC3.82□□□□□ -1.8
RNF20Q5VTR2 MIR624-201ENST00000385217 97 ntBASIC3.82□□□□□ -1.8
RNF20Q5VTR2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.82□□□□□ -1.8
RNF20Q5VTR2 AL513477.1-202ENST00000417061 214 ntBASIC3.82□□□□□ -1.8
RNF20Q5VTR2 AC009969.1-201ENST00000438726 172 ntBASIC3.82□□□□□ -1.8
RNF20Q5VTR2 AC025750.2-201ENST00000442609 450 ntBASIC3.82□□□□□ -1.8
RNF20Q5VTR2 RPL21P129-201ENST00000491732 478 ntBASIC3.82□□□□□ -1.8
RNF20Q5VTR2 AC096725.1-201ENST00000514266 313 ntBASIC3.82□□□□□ -1.8
RNF20Q5VTR2 AC018630.3-201ENST00000542637 96 ntBASIC3.82□□□□□ -1.8
RNF20Q5VTR2 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.82□□□□□ -1.8
RNF20Q5VTR2 MIR2682-201ENST00000580305 110 ntBASIC3.82□□□□□ -1.8
RNF20Q5VTR2 AC019176.2-201ENST00000611579 315 ntBASIC3.82□□□□□ -1.8
RNF20Q5VTR2 uc_338.25-201ENST00000613756 156 ntBASIC3.82□□□□□ -1.8
RNF20Q5VTR2 U6.105-201ENST00000637379 88 ntBASIC3.82□□□□□ -1.8
RNF20Q5VTR2 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.82□□□□□ -1.8
RNF20Q5VTR2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF20Q5VTR2 AP003122.5-201ENST00000527668 3766 ntBASIC3.81□□□□□ -1.8
RNF20Q5VTR2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RNF20Q5VTR2 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RNF20Q5VTR2 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RNF20Q5VTR2 Y_RNA.495-201ENST00000384435 112 ntBASIC3.81□□□□□ -1.8
RNF20Q5VTR2 MIRLET7F2-201ENST00000385277 83 ntBASIC3.81□□□□□ -1.8
RNF20Q5VTR2 MIR891A-201ENST00000401237 79 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms