Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PRPF38BQ5VTL8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF38BQ5VTL8 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF38BQ5VTL8 RNA5SP139-201ENST00000364340 117 ntBASIC4.02□□□□□ -1.77
PRPF38BQ5VTL8 RNU6-1275P-201ENST00000391087 107 ntBASIC4.02□□□□□ -1.77
PRPF38BQ5VTL8 FO393413.1-201ENST00000402892 195 ntBASIC4.02□□□□□ -1.77
PRPF38BQ5VTL8 AC009969.1-201ENST00000438726 172 ntBASIC4.02□□□□□ -1.77
PRPF38BQ5VTL8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC4.02□□□□□ -1.77
PRPF38BQ5VTL8 RNU6-991P-201ENST00000516168 107 ntBASIC4.02□□□□□ -1.77
PRPF38BQ5VTL8 RNU6-1146P-201ENST00000516282 102 ntBASIC4.02□□□□□ -1.77
PRPF38BQ5VTL8 AP003327.1-201ENST00000529684 127 ntBASIC4.02□□□□□ -1.77
PRPF38BQ5VTL8 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.02□□□□□ -1.77
PRPF38BQ5VTL8 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
PRPF38BQ5VTL8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PRPF38BQ5VTL8 MFSD8-236ENST00000641509 4050 ntBASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 RNU6-756P-201ENST00000383997 107 ntBASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 SNORA1-201ENST00000384107 130 ntBASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 RNA5SP508-201ENST00000411327 119 ntBASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 AC123900.1-201ENST00000420390 96 ntBASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 AC244505.4-201ENST00000434905 287 ntBASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 SSXP5-201ENST00000443473 287 ntBASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 RNU6-1270P-201ENST00000517128 108 ntBASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 CYP4A43P-201ENST00000568156 121 ntBASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 FAM35DP-201ENST00000323387 2712 ntBASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.01□□□□□ -1.77
PRPF38BQ5VTL8 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRPF38BQ5VTL8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PRPF38BQ5VTL8 Y_RNA.85-201ENST00000363014 111 ntBASIC4□□□□□ -1.77
PRPF38BQ5VTL8 SNORA51.10-201ENST00000384418 136 ntBASIC4□□□□□ -1.77
PRPF38BQ5VTL8 RNU11-5P-201ENST00000391216 129 ntBASIC4□□□□□ -1.77
PRPF38BQ5VTL8 SNRPGP10-201ENST00000432323 225 ntBASIC4□□□□□ -1.77
PRPF38BQ5VTL8 HLA-N-201ENST00000437516 135 ntBASIC4□□□□□ -1.77
PRPF38BQ5VTL8 AC018634.1-201ENST00000437554 401 ntBASIC4□□□□□ -1.77
PRPF38BQ5VTL8 AL603825.1-201ENST00000438481 80 ntBASIC4□□□□□ -1.77
PRPF38BQ5VTL8 snoU13.26-201ENST00000459452 105 ntBASIC4□□□□□ -1.77
PRPF38BQ5VTL8 HMGN1P7-201ENST00000491722 313 ntBASIC4□□□□□ -1.77
PRPF38BQ5VTL8 MRPS17P9-201ENST00000511924 393 ntBASIC4□□□□□ -1.77
PRPF38BQ5VTL8 SNORD59.2-201ENST00000516873 68 ntBASIC4□□□□□ -1.77
PRPF38BQ5VTL8 U2.20-201ENST00000613956 192 ntBASIC4□□□□□ -1.77
PRPF38BQ5VTL8 AC009831.4-201ENST00000620744 325 ntBASIC4□□□□□ -1.77
PRPF38BQ5VTL8 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRPF38BQ5VTL8 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRPF38BQ5VTL8 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRPF38BQ5VTL8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRPF38BQ5VTL8 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PRPF38BQ5VTL8 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 Y_RNA.163-201ENST00000363702 113 ntBASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 RNU1-101P-201ENST00000391171 127 ntBASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 RNU6-1328P-201ENST00000410938 106 ntBASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 AC083863.1-201ENST00000438811 231 ntBASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 CYP2C59P-201ENST00000457790 269 ntBASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 AC093259.1-201ENST00000509755 300 ntBASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 RNU6-638P-201ENST00000516582 104 ntBASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 RNU6-856P-201ENST00000516959 98 ntBASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 AC007012.1-201ENST00000567192 175 ntBASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 AC022217.4-201ENST00000604389 163 ntBASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
PRPF38BQ5VTL8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF38BQ5VTL8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF38BQ5VTL8 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF38BQ5VTL8 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
PRPF38BQ5VTL8 Y_RNA.528-201ENST00000384575 108 ntBASIC3.98□□□□□ -1.77
PRPF38BQ5VTL8 SNORD12C-201ENST00000386307 89 ntBASIC3.98□□□□□ -1.77
PRPF38BQ5VTL8 MICF-203ENST00000432679 129 ntBASIC3.98□□□□□ -1.77
PRPF38BQ5VTL8 NDUFA4P2-201ENST00000489989 244 ntBASIC3.98□□□□□ -1.77
PRPF38BQ5VTL8 RNU6-1291P-201ENST00000516591 104 ntBASIC3.98□□□□□ -1.77
PRPF38BQ5VTL8 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.98□□□□□ -1.77
PRPF38BQ5VTL8 AC110741.2-201ENST00000605278 268 ntBASIC3.98□□□□□ -1.77
PRPF38BQ5VTL8 AC062037.1-201ENST00000605302 128 ntBASIC3.98□□□□□ -1.77
PRPF38BQ5VTL8 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.98□□□□□ -1.77
PRPF38BQ5VTL8 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PRPF38BQ5VTL8 AP001486.2-201ENST00000561652 5113 ntBASIC3.98□□□□□ -1.77
PRPF38BQ5VTL8 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.98□□□□□ -1.77
PRPF38BQ5VTL8 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.98□□□□□ -1.77
PRPF38BQ5VTL8 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.97□□□□□ -1.77
PRPF38BQ5VTL8 MIR448-201ENST00000362131 111 ntBASIC3.97□□□□□ -1.77
PRPF38BQ5VTL8 SNORA51.5-201ENST00000384126 131 ntBASIC3.97□□□□□ -1.77
PRPF38BQ5VTL8 SNORA70B-201ENST00000384210 135 ntBASIC3.97□□□□□ -1.77
PRPF38BQ5VTL8 Y_RNA.549-201ENST00000384657 102 ntBASIC3.97□□□□□ -1.77
PRPF38BQ5VTL8 SNORD17-201ENST00000390930 237 ntBASIC3.97□□□□□ -1.77
PRPF38BQ5VTL8 AC007064.1-201ENST00000412238 351 ntBASIC3.97□□□□□ -1.77
PRPF38BQ5VTL8 AL159169.1-201ENST00000421119 127 ntBASIC3.97□□□□□ -1.77
PRPF38BQ5VTL8 AC060773.1-201ENST00000421698 310 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms