Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-1.74□□□□□ -2.69
CCDC18Q5T9S5 AC231657.1-201ENST00000624313 397 ntBASIC-1.74□□□□□ -2.69
CCDC18Q5T9S5 RNA5SP482-201ENST00000391269 118 ntBASIC-1.75□□□□□ -2.69
CCDC18Q5T9S5 RNU6-448P-201ENST00000517052 107 ntBASIC-1.75□□□□□ -2.69
CCDC18Q5T9S5 AL596327.1-201ENST00000603629 213 ntBASIC-1.75□□□□□ -2.69
CCDC18Q5T9S5 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.75□□□□□ -2.69
CCDC18Q5T9S5 RNU6-552P-201ENST00000362869 119 ntBASIC-1.75□□□□□ -2.69
CCDC18Q5T9S5 U8.5-201ENST00000364528 136 ntBASIC-1.75□□□□□ -2.69
CCDC18Q5T9S5 MIR501-201ENST00000390204 84 ntBASIC-1.75□□□□□ -2.69
CCDC18Q5T9S5 AL355994.1-201ENST00000424379 260 ntBASIC-1.75□□□□□ -2.69
CCDC18Q5T9S5 AC079781.2-201ENST00000446424 169 ntBASIC-1.75□□□□□ -2.69
CCDC18Q5T9S5 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.75□□□□□ -2.69
CCDC18Q5T9S5 AC087894.1-201ENST00000538359 518 ntBASIC-1.75□□□□□ -2.69
CCDC18Q5T9S5 RPL21P9-201ENST00000556149 474 ntBASIC-1.75□□□□□ -2.69
CCDC18Q5T9S5 AC097478.2-201ENST00000610572 514 ntBASIC-1.75□□□□□ -2.69
CCDC18Q5T9S5 AC006441.5-201ENST00000612680 209 ntBASIC-1.75□□□□□ -2.69
CCDC18Q5T9S5 MPP6-209ENST00000625307 126 ntTSL 5 BASIC-1.75□□□□□ -2.69
CCDC18Q5T9S5 AC091304.10-201ENST00000641554 121 ntBASIC-1.75□□□□□ -2.69
CCDC18Q5T9S5 SNORD51.1-201ENST00000365405 77 ntBASIC-1.76□□□□□ -2.69
CCDC18Q5T9S5 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.76□□□□□ -2.69
CCDC18Q5T9S5 AL590002.1-201ENST00000406554 418 ntBASIC-1.76□□□□□ -2.69
CCDC18Q5T9S5 MTND5P17-201ENST00000418405 1603 ntBASIC-1.76□□□□□ -2.69
CCDC18Q5T9S5 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.76□□□□□ -2.69
CCDC18Q5T9S5 RNU6-1291P-201ENST00000516591 104 ntBASIC-1.76□□□□□ -2.69
CCDC18Q5T9S5 RNU2-56P-201ENST00000516826 190 ntBASIC-1.76□□□□□ -2.69
CCDC18Q5T9S5 MIR3925-201ENST00000584674 77 ntBASIC-1.76□□□□□ -2.69
CCDC18Q5T9S5 AC244250.2-201ENST00000418731 148 ntBASIC-1.77□□□□□ -2.69
CCDC18Q5T9S5 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.77□□□□□ -2.69
CCDC18Q5T9S5 AC010486.2-201ENST00000505572 483 ntBASIC-1.77□□□□□ -2.69
CCDC18Q5T9S5 AC021146.6-201ENST00000514659 117 ntBASIC-1.77□□□□□ -2.69
CCDC18Q5T9S5 RNU6-1116P-201ENST00000517269 99 ntBASIC-1.77□□□□□ -2.69
CCDC18Q5T9S5 RNU6-692P-201ENST00000384496 107 ntBASIC-1.78□□□□□ -2.69
CCDC18Q5T9S5 MIR452-201ENST00000385020 85 ntBASIC-1.78□□□□□ -2.69
CCDC18Q5T9S5 MIR4752-201ENST00000579672 72 ntBASIC-1.78□□□□□ -2.69
CCDC18Q5T9S5 MIR548AC-201ENST00000585049 88 ntBASIC-1.78□□□□□ -2.69
CCDC18Q5T9S5 AP002802.2-201ENST00000605877 235 ntBASIC-1.78□□□□□ -2.69
CCDC18Q5T9S5 snoZ196.1-201ENST00000625269 89 ntBASIC-1.78□□□□□ -2.69
CCDC18Q5T9S5 MIR4251-201ENST00000635819 61 ntBASIC-1.78□□□□□ -2.69
CCDC18Q5T9S5 ZNF204P-201ENST00000416749 2397 ntBASIC-1.78□□□□□ -2.69
CCDC18Q5T9S5 RNU6-853P-201ENST00000364306 107 ntBASIC-1.79□□□□□ -2.7
CCDC18Q5T9S5 MT-TN-201ENST00000387400 73 ntBASIC-1.79□□□□□ -2.7
CCDC18Q5T9S5 RNU6-504P-201ENST00000516568 104 ntBASIC-1.79□□□□□ -2.7
CCDC18Q5T9S5 AC006380.1-201ENST00000603598 186 ntBASIC-1.79□□□□□ -2.7
CCDC18Q5T9S5 MIR7844-201ENST00000616161 122 ntBASIC-1.79□□□□□ -2.7
CCDC18Q5T9S5 AL157770.1-201ENST00000623049 439 ntBASIC-1.79□□□□□ -2.7
CCDC18Q5T9S5 MIR377-201ENST00000362145 69 ntBASIC-1.8□□□□□ -2.7
CCDC18Q5T9S5 U3.4-201ENST00000363352 213 ntBASIC-1.8□□□□□ -2.7
CCDC18Q5T9S5 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.8□□□□□ -2.7
CCDC18Q5T9S5 SNORA75.1-201ENST00000391130 148 ntBASIC-1.8□□□□□ -2.7
CCDC18Q5T9S5 AL365184.2-201ENST00000431139 435 ntBASIC-1.8□□□□□ -2.7
CCDC18Q5T9S5 SUMO1P3-201ENST00000439961 304 ntBASIC-1.8□□□□□ -2.7
CCDC18Q5T9S5 AL512347.1-201ENST00000566420 503 ntBASIC-1.8□□□□□ -2.7
CCDC18Q5T9S5 MIR5006-201ENST00000583027 110 ntBASIC-1.8□□□□□ -2.7
CCDC18Q5T9S5 SCARNA4-201ENST00000629045 128 ntBASIC-1.8□□□□□ -2.7
CCDC18Q5T9S5 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.81□□□□□ -2.7
CCDC18Q5T9S5 RNU4-21P-201ENST00000362802 126 ntBASIC-1.81□□□□□ -2.7
CCDC18Q5T9S5 RNU6-1093P-201ENST00000391194 107 ntBASIC-1.81□□□□□ -2.7
CCDC18Q5T9S5 RNU6-221P-201ENST00000459541 99 ntBASIC-1.81□□□□□ -2.7
CCDC18Q5T9S5 RNU6-123P-201ENST00000516163 102 ntBASIC-1.81□□□□□ -2.7
CCDC18Q5T9S5 AL355375.2-201ENST00000574825 175 ntBASIC-1.81□□□□□ -2.7
CCDC18Q5T9S5 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.81□□□□□ -2.7
CCDC18Q5T9S5 MIR136-201ENST00000385207 82 ntBASIC-1.82□□□□□ -2.7
CCDC18Q5T9S5 RNU2-42P-201ENST00000410697 113 ntBASIC-1.82□□□□□ -2.7
CCDC18Q5T9S5 FCF1P9-201ENST00000412546 282 ntBASIC-1.82□□□□□ -2.7
CCDC18Q5T9S5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-1.82□□□□□ -2.7
CCDC18Q5T9S5 AC027279.3-201ENST00000625055 122 ntBASIC-1.82□□□□□ -2.7
CCDC18Q5T9S5 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.82□□□□□ -2.7
CCDC18Q5T9S5 RNU6-190P-201ENST00000384154 102 ntBASIC-1.82□□□□□ -2.7
CCDC18Q5T9S5 MIR586-201ENST00000385035 97 ntBASIC-1.82□□□□□ -2.7
CCDC18Q5T9S5 MTCYBP42-201ENST00000444653 1130 ntBASIC-1.82□□□□□ -2.7
CCDC18Q5T9S5 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-1.82□□□□□ -2.7
CCDC18Q5T9S5 SCARNA18B-201ENST00000458806 135 ntBASIC-1.82□□□□□ -2.7
CCDC18Q5T9S5 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC-1.82□□□□□ -2.7
CCDC18Q5T9S5 RNA5SP66-201ENST00000517178 101 ntBASIC-1.82□□□□□ -2.7
CCDC18Q5T9S5 RNU1-29P-201ENST00000606574 126 ntBASIC-1.82□□□□□ -2.7
CCDC18Q5T9S5 Six3os1_7.1-201ENST00000621512 201 ntBASIC-1.82□□□□□ -2.7
CCDC18Q5T9S5 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.83□□□□□ -2.7
CCDC18Q5T9S5 SNORD45.3-201ENST00000363836 72 ntBASIC-1.83□□□□□ -2.7
CCDC18Q5T9S5 SNORA26.5-201ENST00000391215 123 ntBASIC-1.83□□□□□ -2.7
CCDC18Q5T9S5 MTND1P26-201ENST00000440488 538 ntBASIC-1.83□□□□□ -2.7
CCDC18Q5T9S5 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-1.83□□□□□ -2.7
CCDC18Q5T9S5 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-1.83□□□□□ -2.7
CCDC18Q5T9S5 SNORD92-201ENST00000585078 85 ntBASIC-1.83□□□□□ -2.7
CCDC18Q5T9S5 AC138207.3-201ENST00000585289 166 ntBASIC-1.83□□□□□ -2.7
CCDC18Q5T9S5 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.83□□□□□ -2.7
CCDC18Q5T9S5 DEFB131E-202ENST00000602581 683 ntBASIC-1.83□□□□□ -2.7
CCDC18Q5T9S5 AC099786.3-201ENST00000565735 1410 ntBASIC-1.84□□□□□ -2.7
CCDC18Q5T9S5 RNU6-946P-201ENST00000383878 107 ntBASIC-1.84□□□□□ -2.7
CCDC18Q5T9S5 SNORA67.2-201ENST00000384300 149 ntBASIC-1.84□□□□□ -2.7
CCDC18Q5T9S5 MIR562-201ENST00000384894 95 ntBASIC-1.84□□□□□ -2.7
CCDC18Q5T9S5 MIR125B2-201ENST00000385128 89 ntBASIC-1.84□□□□□ -2.7
CCDC18Q5T9S5 MT-TY-201ENST00000387409 66 ntBASIC-1.84□□□□□ -2.7
CCDC18Q5T9S5 HLA-S-202ENST00000425174 53 ntBASIC-1.84□□□□□ -2.7
CCDC18Q5T9S5 AC026414.1-201ENST00000504046 698 ntBASIC-1.84□□□□□ -2.7
CCDC18Q5T9S5 AC046134.1-201ENST00000514454 666 ntBASIC-1.84□□□□□ -2.7
CCDC18Q5T9S5 RNU6-58P-201ENST00000517143 103 ntBASIC-1.84□□□□□ -2.7
CCDC18Q5T9S5 AC109479.2-201ENST00000517842 174 ntBASIC-1.84□□□□□ -2.7
CCDC18Q5T9S5 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.84□□□□□ -2.7
CCDC18Q5T9S5 AC140658.3-201ENST00000567603 271 ntBASIC-1.84□□□□□ -2.7
CCDC18Q5T9S5 AL139022.2-201ENST00000606934 443 ntBASIC-1.84□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms