Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 Y_RNA.94-201ENST00000363068 106 ntBASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 Y_RNA.507-201ENST00000384500 99 ntBASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 RHEBP3-201ENST00000411920 351 ntBASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 RNU2-11P-201ENST00000459191 187 ntBASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 RNU5F-4P-201ENST00000516581 114 ntBASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 SCARNA15.3-201ENST00000626315 122 ntBASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 SCARNA4.1-201ENST00000628597 123 ntBASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 AC244205.2-202ENST00000635781 342 ntBASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CTC1Q2NKJ3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 IPO8P1-201ENST00000455509 3109 ntBASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 SNORA2.2-201ENST00000365473 135 ntBASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 Y_RNA.360-201ENST00000365512 102 ntBASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 AC016717.1-201ENST00000448918 286 ntBASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 RNU7-23P-201ENST00000459465 62 ntBASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 RNU6-221P-201ENST00000459541 99 ntBASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 RPS27P22-201ENST00000478056 241 ntBASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 AL049873.1-201ENST00000480540 376 ntBASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 MIR4513-201ENST00000581077 86 ntBASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 UBE3AP2-201ENST00000429033 2259 ntBASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CTC1Q2NKJ3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CTC1Q2NKJ3 TNPO1P3-201ENST00000436471 2662 ntBASIC4□□□□□ -1.77
CTC1Q2NKJ3 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
CTC1Q2NKJ3 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4□□□□□ -1.77
CTC1Q2NKJ3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4□□□□□ -1.77
CTC1Q2NKJ3 MIR1283-1-201ENST00000408494 87 ntBASIC4□□□□□ -1.77
CTC1Q2NKJ3 MIR1251-201ENST00000408552 70 ntBASIC4□□□□□ -1.77
CTC1Q2NKJ3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4□□□□□ -1.77
CTC1Q2NKJ3 RNA5SP120-201ENST00000410900 112 ntBASIC4□□□□□ -1.77
CTC1Q2NKJ3 AC012531.5-201ENST00000611375 151 ntBASIC4□□□□□ -1.77
CTC1Q2NKJ3 MIR548BB-201ENST00000626714 66 ntBASIC4□□□□□ -1.77
CTC1Q2NKJ3 MIR1255B1-201ENST00000636325 63 ntBASIC4□□□□□ -1.77
CTC1Q2NKJ3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CTC1Q2NKJ3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CTC1Q2NKJ3 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 RNA5SP50-201ENST00000363731 107 ntBASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 RNU1-33P-201ENST00000364249 162 ntBASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 Y_RNA.316-201ENST00000365118 111 ntBASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 SNORA18-201ENST00000384416 132 ntBASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 MIR518F-201ENST00000384973 87 ntBASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 MIR605-201ENST00000385078 83 ntBASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 RN7SKP282-201ENST00000516824 299 ntBASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 AC022695.1-201ENST00000522089 237 ntBASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 AC004486.1-201ENST00000546846 233 ntBASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 AL513534.2-201ENST00000603836 250 ntBASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CTC1Q2NKJ3 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 RNU6-1010P-201ENST00000362757 107 ntBASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 RNU6-1229P-201ENST00000364295 107 ntBASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 RNU6-198P-201ENST00000384258 104 ntBASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 Y_RNA.467-201ENST00000384297 102 ntBASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 MIR128-1-201ENST00000384921 82 ntBASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 RNU6-750P-201ENST00000390946 107 ntBASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 RNU6-733P-201ENST00000410759 104 ntBASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 SNRPGP13-201ENST00000442212 177 ntBASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 AP001486.1-201ENST00000463339 476 ntBASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 Y_RNA.659-201ENST00000515994 113 ntBASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 RNU2-35P-201ENST00000516446 142 ntBASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 MIR4305-201ENST00000583252 102 ntBASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 MIR4753-201ENST00000585119 83 ntBASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CTC1Q2NKJ3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CTC1Q2NKJ3 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.97□□□□□ -1.77
CTC1Q2NKJ3 MIR147B-201ENST00000390185 80 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms