Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.44□□□□□ -2.18
GABPAQ06546 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.44□□□□□ -2.18
GABPAQ06546 MIR4709-201ENST00000577272 72 ntBASIC1.44□□□□□ -2.18
GABPAQ06546 AC005730.3-201ENST00000583067 366 ntBASIC1.44□□□□□ -2.18
GABPAQ06546 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
GABPAQ06546 AC022432.1-201ENST00000595739 310 ntBASIC1.44□□□□□ -2.18
GABPAQ06546 AC113139.1-201ENST00000605049 239 ntBASIC1.44□□□□□ -2.18
GABPAQ06546 AC080078.3-201ENST00000605407 463 ntBASIC1.44□□□□□ -2.18
GABPAQ06546 AL357075.2-201ENST00000614906 189 ntBASIC1.44□□□□□ -2.18
GABPAQ06546 U6.73-201ENST00000619194 103 ntBASIC1.44□□□□□ -2.18
GABPAQ06546 U6.108-201ENST00000637764 58 ntBASIC1.44□□□□□ -2.18
GABPAQ06546 ICE2P2-201ENST00000483823 2787 ntBASIC1.43□□□□□ -2.18
GABPAQ06546 Y_RNA.67-201ENST00000362870 100 ntBASIC1.43□□□□□ -2.18
GABPAQ06546 Y_RNA.142-201ENST00000363491 102 ntBASIC1.43□□□□□ -2.18
GABPAQ06546 RNU6-271P-201ENST00000363858 105 ntBASIC1.43□□□□□ -2.18
GABPAQ06546 SNORA25.9-201ENST00000365087 128 ntBASIC1.43□□□□□ -2.18
GABPAQ06546 RNU6-1283P-201ENST00000365314 105 ntBASIC1.43□□□□□ -2.18
GABPAQ06546 RNU6-338P-201ENST00000383888 105 ntBASIC1.43□□□□□ -2.18
GABPAQ06546 RPL21P1-201ENST00000399532 476 ntBASIC1.43□□□□□ -2.18
GABPAQ06546 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
GABPAQ06546 ELOCP21-201ENST00000412558 336 ntBASIC1.43□□□□□ -2.18
GABPAQ06546 TOMM22P2-201ENST00000430735 237 ntBASIC1.43□□□□□ -2.18
GABPAQ06546 RNU7-34P-201ENST00000459394 64 ntBASIC1.43□□□□□ -2.18
GABPAQ06546 RPS27P22-201ENST00000478056 241 ntBASIC1.43□□□□□ -2.18
GABPAQ06546 AC010469.2-201ENST00000496412 480 ntBASIC1.43□□□□□ -2.18
GABPAQ06546 AC023157.2-201ENST00000540596 141 ntBASIC1.43□□□□□ -2.18
GABPAQ06546 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.43□□□□□ -2.18
GABPAQ06546 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.43□□□□□ -2.18
GABPAQ06546 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
GABPAQ06546 RNU6-1264P-201ENST00000383891 107 ntBASIC1.42□□□□□ -2.18
GABPAQ06546 Y_RNA.474-201ENST00000384341 102 ntBASIC1.42□□□□□ -2.18
GABPAQ06546 SNORA75.6-201ENST00000391318 127 ntBASIC1.42□□□□□ -2.18
GABPAQ06546 RNU6-1156P-201ENST00000410365 100 ntBASIC1.42□□□□□ -2.18
GABPAQ06546 AC010154.1-201ENST00000425857 269 ntBASIC1.42□□□□□ -2.18
GABPAQ06546 AL606517.2-201ENST00000442855 241 ntBASIC1.42□□□□□ -2.18
GABPAQ06546 AC010598.1-201ENST00000510378 103 ntBASIC1.42□□□□□ -2.18
GABPAQ06546 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.42□□□□□ -2.18
GABPAQ06546 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.42□□□□□ -2.18
GABPAQ06546 AC018448.1-201ENST00000552843 316 ntBASIC1.42□□□□□ -2.18
GABPAQ06546 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.42□□□□□ -2.18
GABPAQ06546 MIR6504-201ENST00000613520 61 ntBASIC1.42□□□□□ -2.18
GABPAQ06546 AC091895.1-201ENST00000624494 256 ntBASIC1.42□□□□□ -2.18
GABPAQ06546 AC073544.1-201ENST00000600110 1595 ntBASIC1.42□□□□□ -2.18
GABPAQ06546 MIR96-201ENST00000362288 78 ntBASIC1.41□□□□□ -2.18
GABPAQ06546 RNU6-890P-201ENST00000384121 107 ntBASIC1.41□□□□□ -2.18
GABPAQ06546 RNU6-318P-201ENST00000384283 103 ntBASIC1.41□□□□□ -2.18
GABPAQ06546 MIR625-201ENST00000385047 85 ntBASIC1.41□□□□□ -2.18
GABPAQ06546 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
GABPAQ06546 SNORA69.1-201ENST00000390904 137 ntBASIC1.41□□□□□ -2.18
GABPAQ06546 RNU1-78P-201ENST00000391248 165 ntBASIC1.41□□□□□ -2.18
GABPAQ06546 RNA5SP475-201ENST00000410568 110 ntBASIC1.41□□□□□ -2.18
GABPAQ06546 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.41□□□□□ -2.18
GABPAQ06546 MTCO3P10-201ENST00000455912 772 ntBASIC1.41□□□□□ -2.18
GABPAQ06546 Y_RNA.653-201ENST00000459091 95 ntBASIC1.41□□□□□ -2.18
GABPAQ06546 RPS26P45-201ENST00000471748 340 ntBASIC1.41□□□□□ -2.18
GABPAQ06546 AC074133.1-201ENST00000515696 183 ntBASIC1.41□□□□□ -2.18
GABPAQ06546 RNU7-99P-201ENST00000516271 62 ntBASIC1.41□□□□□ -2.18
GABPAQ06546 RN7SKP49-201ENST00000516675 260 ntBASIC1.41□□□□□ -2.18
GABPAQ06546 MIR4438-201ENST00000585271 93 ntBASIC1.41□□□□□ -2.18
GABPAQ06546 UBE2V2P2-201ENST00000587677 504 ntBASIC1.41□□□□□ -2.18
GABPAQ06546 AL929325.1-201ENST00000603096 117 ntBASIC1.41□□□□□ -2.18
GABPAQ06546 MTND4LP32-201ENST00000636111 270 ntBASIC1.41□□□□□ -2.18
GABPAQ06546 SNORA72.1-201ENST00000363485 129 ntBASIC1.4□□□□□ -2.19
GABPAQ06546 SNORD1A-201ENST00000364968 72 ntBASIC1.4□□□□□ -2.19
GABPAQ06546 Y_RNA.577-201ENST00000384794 101 ntBASIC1.4□□□□□ -2.19
GABPAQ06546 MTCYBP4-201ENST00000401524 249 ntBASIC1.4□□□□□ -2.19
GABPAQ06546 SNORD12B-201ENST00000410433 91 ntBASIC1.4□□□□□ -2.19
GABPAQ06546 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.4□□□□□ -2.19
GABPAQ06546 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC1.4□□□□□ -2.19
GABPAQ06546 RNU6-625P-201ENST00000459412 107 ntBASIC1.4□□□□□ -2.19
GABPAQ06546 RNU7-169P-201ENST00000459456 61 ntBASIC1.4□□□□□ -2.19
GABPAQ06546 AC093852.1-201ENST00000503587 266 ntBASIC1.4□□□□□ -2.19
GABPAQ06546 RNU6-470P-201ENST00000515954 104 ntBASIC1.4□□□□□ -2.19
GABPAQ06546 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.4□□□□□ -2.19
GABPAQ06546 MIR4422-201ENST00000581938 83 ntBASIC1.4□□□□□ -2.19
GABPAQ06546 AC022217.4-201ENST00000604389 163 ntBASIC1.4□□□□□ -2.19
GABPAQ06546 MIR7974-201ENST00000615835 79 ntBASIC1.4□□□□□ -2.19
GABPAQ06546 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.4□□□□□ -2.19
GABPAQ06546 AL161722.3-201ENST00000605789 2983 ntBASIC1.39□□□□□ -2.19
GABPAQ06546 RNU6-1301P-201ENST00000362724 104 ntBASIC1.39□□□□□ -2.19
GABPAQ06546 Y_RNA.384-201ENST00000383909 102 ntBASIC1.39□□□□□ -2.19
GABPAQ06546 SNORA20B-201ENST00000384220 132 ntBASIC1.39□□□□□ -2.19
GABPAQ06546 RNU6-1297P-201ENST00000384415 104 ntBASIC1.39□□□□□ -2.19
GABPAQ06546 RNU6-950P-201ENST00000384651 107 ntBASIC1.39□□□□□ -2.19
GABPAQ06546 Y_RNA.605-201ENST00000410577 105 ntBASIC1.39□□□□□ -2.19
GABPAQ06546 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.39□□□□□ -2.19
GABPAQ06546 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.39□□□□□ -2.19
GABPAQ06546 MRPS10P1-201ENST00000448483 130 ntBASIC1.39□□□□□ -2.19
GABPAQ06546 RPS27P1-201ENST00000450552 247 ntBASIC1.39□□□□□ -2.19
GABPAQ06546 AC105758.1-201ENST00000506038 399 ntBASIC1.39□□□□□ -2.19
GABPAQ06546 SNORA40.9-201ENST00000515895 93 ntBASIC1.39□□□□□ -2.19
GABPAQ06546 MIR2355-201ENST00000517199 87 ntBASIC1.39□□□□□ -2.19
GABPAQ06546 RNU7-128P-201ENST00000517247 62 ntBASIC1.39□□□□□ -2.19
GABPAQ06546 AP001485.1-201ENST00000604799 199 ntBASIC1.39□□□□□ -2.19
GABPAQ06546 RBM11P1-201ENST00000604951 799 ntBASIC1.39□□□□□ -2.19
GABPAQ06546 AC025253.1-201ENST00000613623 543 ntBASIC1.39□□□□□ -2.19
GABPAQ06546 AC087588.2-201ENST00000617667 426 ntBASIC1.39□□□□□ -2.19
GABPAQ06546 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.39□□□□□ -2.19
GABPAQ06546 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
GABPAQ06546 Y_RNA.387-201ENST00000383918 102 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms