Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RNU6-700P-201ENST00000391043 107 ntBASIC1.03□□□□□ -2.24
HMGCS1Q01581 Y_RNA.599-201ENST00000410489 109 ntBASIC1.03□□□□□ -2.24
HMGCS1Q01581 AC245047.3-201ENST00000429428 127 ntBASIC1.03□□□□□ -2.24
HMGCS1Q01581 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.03□□□□□ -2.24
HMGCS1Q01581 MTND4P17-201ENST00000470444 350 ntBASIC1.03□□□□□ -2.24
HMGCS1Q01581 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.03□□□□□ -2.24
HMGCS1Q01581 AC010469.2-201ENST00000496412 480 ntBASIC1.03□□□□□ -2.24
HMGCS1Q01581 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.03□□□□□ -2.24
HMGCS1Q01581 AC046134.1-201ENST00000514454 666 ntBASIC1.03□□□□□ -2.24
HMGCS1Q01581 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.03□□□□□ -2.24
HMGCS1Q01581 RNU7-99P-201ENST00000516271 62 ntBASIC1.03□□□□□ -2.24
HMGCS1Q01581 SCARNA16.2-201ENST00000516520 172 ntBASIC1.03□□□□□ -2.24
HMGCS1Q01581 APOOP3-201ENST00000536787 586 ntBASIC1.03□□□□□ -2.24
HMGCS1Q01581 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.03□□□□□ -2.24
HMGCS1Q01581 MIR4438-201ENST00000585271 93 ntBASIC1.03□□□□□ -2.24
HMGCS1Q01581 AL390123.1-201ENST00000603216 237 ntBASIC1.03□□□□□ -2.24
HMGCS1Q01581 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.03□□□□□ -2.24
HMGCS1Q01581 Y_RNA.160-201ENST00000363677 92 ntBASIC1.02□□□□□ -2.25
HMGCS1Q01581 RNU6-879P-201ENST00000364328 108 ntBASIC1.02□□□□□ -2.25
HMGCS1Q01581 Y_RNA.248-201ENST00000364501 109 ntBASIC1.02□□□□□ -2.25
HMGCS1Q01581 Y_RNA.358-201ENST00000365491 99 ntBASIC1.02□□□□□ -2.25
HMGCS1Q01581 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
HMGCS1Q01581 RNU6-767P-201ENST00000384132 107 ntBASIC1.02□□□□□ -2.25
HMGCS1Q01581 SNORA70.7-201ENST00000384159 133 ntBASIC1.02□□□□□ -2.25
HMGCS1Q01581 RNU6-440P-201ENST00000390882 105 ntBASIC1.02□□□□□ -2.25
HMGCS1Q01581 SNORA75.4-201ENST00000391278 119 ntBASIC1.02□□□□□ -2.25
HMGCS1Q01581 AL355796.1-201ENST00000406706 323 ntBASIC1.02□□□□□ -2.25
HMGCS1Q01581 MTCYBP10-201ENST00000424905 650 ntBASIC1.02□□□□□ -2.25
HMGCS1Q01581 OR2A41P-201ENST00000473586 105 ntBASIC1.02□□□□□ -2.25
HMGCS1Q01581 RPS27P22-201ENST00000478056 241 ntBASIC1.02□□□□□ -2.25
HMGCS1Q01581 RNU6-120P-201ENST00000516077 103 ntBASIC1.02□□□□□ -2.25
HMGCS1Q01581 AC022868.1-201ENST00000517767 391 ntBASIC1.02□□□□□ -2.25
HMGCS1Q01581 SUMO2P16-201ENST00000519475 264 ntBASIC1.02□□□□□ -2.25
HMGCS1Q01581 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.02□□□□□ -2.25
HMGCS1Q01581 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.02□□□□□ -2.25
HMGCS1Q01581 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
HMGCS1Q01581 AC092794.1-201ENST00000612734 582 ntBASIC1.02□□□□□ -2.25
HMGCS1Q01581 RNA5SP327-201ENST00000362494 101 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 RNU6-845P-201ENST00000362578 103 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 RNA5SP259-201ENST00000365541 109 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 SNORA20B-201ENST00000384220 132 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 MRPL42P3-201ENST00000401492 326 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 PDCL2P1-201ENST00000419302 352 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.01□□□□□ -2.25
HMGCS1Q01581 AC092423.1-201ENST00000430165 186 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.01□□□□□ -2.25
HMGCS1Q01581 RPS29P28-201ENST00000446439 141 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 UQCRBP2-201ENST00000447827 297 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 MRPS10P1-201ENST00000448483 130 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 AC010598.1-201ENST00000510378 103 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.01□□□□□ -2.25
HMGCS1Q01581 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.01□□□□□ -2.25
HMGCS1Q01581 AP002001.1-203ENST00000534002 267 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 MIR4295-201ENST00000585286 85 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.01□□□□□ -2.25
HMGCS1Q01581 AL021879.1-201ENST00000611756 288 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 MIR1244-1-201ENST00000612829 85 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 AC040896.1-201ENST00000613819 479 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 PISRT1.1-201ENST00000616930 107 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 MIR1244-3-201ENST00000635744 85 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 MIR1244-2-201ENST00000636449 85 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 MIR1244-4-202ENST00000636813 85 ntBASIC1.01□□□□□ -2.25
HMGCS1Q01581 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
HMGCS1Q01581 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
HMGCS1Q01581 Y_RNA.279-201ENST00000364763 95 ntBASIC1□□□□□ -2.25
HMGCS1Q01581 RNU6-318P-201ENST00000384283 103 ntBASIC1□□□□□ -2.25
HMGCS1Q01581 MT-TL1-201ENST00000386347 75 ntBASIC1□□□□□ -2.25
HMGCS1Q01581 RNU6-876P-201ENST00000391295 104 ntBASIC1□□□□□ -2.25
HMGCS1Q01581 RNU6ATAC25P-201ENST00000408798 117 ntBASIC1□□□□□ -2.25
HMGCS1Q01581 RN7SKP200-201ENST00000410564 320 ntBASIC1□□□□□ -2.25
HMGCS1Q01581 RNU6-1304P-201ENST00000411374 106 ntBASIC1□□□□□ -2.25
HMGCS1Q01581 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1□□□□□ -2.25
HMGCS1Q01581 RPL23AP50-201ENST00000434149 455 ntBASIC1□□□□□ -2.25
HMGCS1Q01581 HMGN1P7-201ENST00000491722 313 ntBASIC1□□□□□ -2.25
HMGCS1Q01581 AL133373.1-201ENST00000497098 94 ntBASIC1□□□□□ -2.25
HMGCS1Q01581 AC116353.2-201ENST00000505332 712 ntBASIC1□□□□□ -2.25
HMGCS1Q01581 CYP3A52P-201ENST00000563326 91 ntBASIC1□□□□□ -2.25
HMGCS1Q01581 AC080078.3-201ENST00000605407 463 ntBASIC1□□□□□ -2.25
HMGCS1Q01581 U6atac.1-201ENST00000616025 117 ntBASIC1□□□□□ -2.25
HMGCS1Q01581 AC092794.2-201ENST00000620933 563 ntBASIC1□□□□□ -2.25
HMGCS1Q01581 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.99□□□□□ -2.25
HMGCS1Q01581 MIR337-201ENST00000362281 93 ntBASIC0.99□□□□□ -2.25
HMGCS1Q01581 RNU6-99P-201ENST00000364721 107 ntBASIC0.99□□□□□ -2.25
HMGCS1Q01581 Y_RNA.505-201ENST00000384489 102 ntBASIC0.99□□□□□ -2.25
HMGCS1Q01581 RNU6-1065P-201ENST00000384513 106 ntBASIC0.99□□□□□ -2.25
HMGCS1Q01581 RNU6-950P-201ENST00000384651 107 ntBASIC0.99□□□□□ -2.25
HMGCS1Q01581 SNX2P2-201ENST00000424553 323 ntBASIC0.99□□□□□ -2.25
HMGCS1Q01581 MTND1P2-201ENST00000430604 821 ntBASIC0.99□□□□□ -2.25
HMGCS1Q01581 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.99□□□□□ -2.25
HMGCS1Q01581 PCNPP5-201ENST00000452246 481 ntBASIC0.99□□□□□ -2.25
HMGCS1Q01581 AC087343.1-201ENST00000477341 475 ntBASIC0.99□□□□□ -2.25
HMGCS1Q01581 AC018448.1-201ENST00000552843 316 ntBASIC0.99□□□□□ -2.25
HMGCS1Q01581 AC004584.2-201ENST00000570407 410 ntBASIC0.99□□□□□ -2.25
HMGCS1Q01581 MIR4781-201ENST00000585250 76 ntBASIC0.99□□□□□ -2.25
HMGCS1Q01581 HSPE1P19-201ENST00000603327 295 ntBASIC0.99□□□□□ -2.25
HMGCS1Q01581 AC104260.1-201ENST00000616660 539 ntBASIC0.99□□□□□ -2.25
HMGCS1Q01581 AL669831.3-213ENST00000636676 183 ntBASIC0.99□□□□□ -2.25
HMGCS1Q01581 AC018630.2-201ENST00000534866 2403 ntBASIC0.99□□□□□ -2.25
HMGCS1Q01581 AC073544.1-201ENST00000600110 1595 ntBASIC0.99□□□□□ -2.25
HMGCS1Q01581 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms