Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 MIR1248-201ENST00000629190 106 ntBASIC2.91□□□□□ -1.94
HERVK_113P62684 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
HERVK_113P62684 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.91□□□□□ -1.94
HERVK_113P62684 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
HERVK_113P62684 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.9□□□□□ -1.95
HERVK_113P62684 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HERVK_113P62684 RNU6-1180P-201ENST00000364935 107 ntBASIC2.9□□□□□ -1.95
HERVK_113P62684 RNU6-418P-201ENST00000384035 107 ntBASIC2.9□□□□□ -1.95
HERVK_113P62684 Y_RNA.464-201ENST00000384282 110 ntBASIC2.9□□□□□ -1.95
HERVK_113P62684 MIR627-201ENST00000384979 97 ntBASIC2.9□□□□□ -1.95
HERVK_113P62684 MIR504-201ENST00000385065 83 ntBASIC2.9□□□□□ -1.95
HERVK_113P62684 SNORA26.5-201ENST00000391215 123 ntBASIC2.9□□□□□ -1.95
HERVK_113P62684 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.9□□□□□ -1.95
HERVK_113P62684 RNA5SP425-201ENST00000410336 112 ntBASIC2.9□□□□□ -1.95
HERVK_113P62684 AL161788.1-201ENST00000441805 169 ntBASIC2.9□□□□□ -1.95
HERVK_113P62684 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.9□□□□□ -1.95
HERVK_113P62684 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.9□□□□□ -1.95
HERVK_113P62684 snoZ196.1-201ENST00000625269 89 ntBASIC2.9□□□□□ -1.95
HERVK_113P62684 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
HERVK_113P62684 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HERVK_113P62684 Z82209.1-201ENST00000422141 2135 ntBASIC2.89□□□□□ -1.95
HERVK_113P62684 Y_RNA.124-201ENST00000363339 93 ntBASIC2.89□□□□□ -1.95
HERVK_113P62684 Y_RNA.293-201ENST00000364908 93 ntBASIC2.89□□□□□ -1.95
HERVK_113P62684 RNU6-975P-201ENST00000384296 105 ntBASIC2.89□□□□□ -1.95
HERVK_113P62684 AL359511.1-201ENST00000402970 211 ntBASIC2.89□□□□□ -1.95
HERVK_113P62684 CYP2C59P-201ENST00000457790 269 ntBASIC2.89□□□□□ -1.95
HERVK_113P62684 RNU6-237P-201ENST00000515985 71 ntBASIC2.89□□□□□ -1.95
HERVK_113P62684 RNU6-1278P-201ENST00000516130 107 ntBASIC2.89□□□□□ -1.95
HERVK_113P62684 RNU6-1219P-201ENST00000516143 112 ntBASIC2.89□□□□□ -1.95
HERVK_113P62684 RNA5SP490-201ENST00000517141 136 ntBASIC2.89□□□□□ -1.95
HERVK_113P62684 AC018630.3-201ENST00000542637 96 ntBASIC2.89□□□□□ -1.95
HERVK_113P62684 AC004486.1-201ENST00000546846 233 ntBASIC2.89□□□□□ -1.95
HERVK_113P62684 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.89□□□□□ -1.95
HERVK_113P62684 MIR5692C2-201ENST00000577959 77 ntBASIC2.89□□□□□ -1.95
HERVK_113P62684 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
HERVK_113P62684 SNORD56.5-201ENST00000364281 72 ntBASIC2.88□□□□□ -1.95
HERVK_113P62684 SNORA72.4-201ENST00000384174 132 ntBASIC2.88□□□□□ -1.95
HERVK_113P62684 RNA5SP210-201ENST00000391034 120 ntBASIC2.88□□□□□ -1.95
HERVK_113P62684 RN7SKP223-201ENST00000410582 62 ntBASIC2.88□□□□□ -1.95
HERVK_113P62684 AL135786.1-201ENST00000415892 214 ntBASIC2.88□□□□□ -1.95
HERVK_113P62684 HMGN2P18-201ENST00000450680 270 ntBASIC2.88□□□□□ -1.95
HERVK_113P62684 AC234781.5-201ENST00000508429 271 ntBASIC2.88□□□□□ -1.95
HERVK_113P62684 RNU6-255P-201ENST00000516957 105 ntBASIC2.88□□□□□ -1.95
HERVK_113P62684 MIR3684-201ENST00000579779 74 ntBASIC2.88□□□□□ -1.95
HERVK_113P62684 AC025754.2-201ENST00000606491 432 ntBASIC2.88□□□□□ -1.95
HERVK_113P62684 AC013791.1-201ENST00000616619 62 ntBASIC2.88□□□□□ -1.95
HERVK_113P62684 U6.106-201ENST00000636360 105 ntBASIC2.88□□□□□ -1.95
HERVK_113P62684 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.88□□□□□ -1.95
HERVK_113P62684 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
HERVK_113P62684 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HERVK_113P62684 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.87□□□□□ -1.95
HERVK_113P62684 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HERVK_113P62684 RNU1-23P-201ENST00000363361 144 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 RNU6-461P-201ENST00000364195 107 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 RNU6-407P-201ENST00000365280 104 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 Y_RNA.368-201ENST00000365547 113 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 SNORA20B-201ENST00000384220 132 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 AL355796.1-201ENST00000406706 323 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 RNU2-2P-201ENST00000410396 191 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 AC080013.2-201ENST00000460866 323 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.87□□□□□ -1.95
HERVK_113P62684 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 RNU6-948P-201ENST00000516374 107 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 RNU6-826P-201ENST00000516827 104 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 AC022616.8-201ENST00000533569 253 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 MIR3670-2-201ENST00000582974 65 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 MIR3670-1-201ENST00000584160 65 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 MIR3670-3-201ENST00000584855 65 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 RNU2-4P-201ENST00000606190 192 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 AC104465.1-201ENST00000611365 139 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 U2.15-201ENST00000611544 191 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 MIR3670-4-201ENST00000612260 65 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 U2.16-201ENST00000613119 191 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 U2.12-201ENST00000613778 191 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 U2.9-201ENST00000615427 191 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 AL078604.3-201ENST00000615580 211 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 U2.11-201ENST00000616345 191 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 U2.2-201ENST00000616535 191 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 U2.3-201ENST00000617785 191 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 U2.19-201ENST00000618602 191 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 RNU2-1-201ENST00000618664 191 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 U2.6-201ENST00000619225 191 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 U2.5-201ENST00000619465 191 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 U2.10-201ENST00000620268 191 ntBASIC2.87□□□□□ -1.95
HERVK_113P62684 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
HERVK_113P62684 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.87□□□□□ -1.95
HERVK_113P62684 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
HERVK_113P62684 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
HERVK_113P62684 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.87□□□□□ -1.95
HERVK_113P62684 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
HERVK_113P62684 RNU4-10P-201ENST00000364383 140 ntBASIC2.86□□□□□ -1.95
HERVK_113P62684 Y_RNA.310-201ENST00000365063 113 ntBASIC2.86□□□□□ -1.95
HERVK_113P62684 RNU4-17P-201ENST00000365598 141 ntBASIC2.86□□□□□ -1.95
HERVK_113P62684 Y_RNA.456-201ENST00000384232 111 ntBASIC2.86□□□□□ -1.95
HERVK_113P62684 Y_RNA.571-201ENST00000384753 98 ntBASIC2.86□□□□□ -1.95
HERVK_113P62684 RNU2-63P-201ENST00000410792 194 ntBASIC2.86□□□□□ -1.95
HERVK_113P62684 HSPE1P21-201ENST00000438283 308 ntBASIC2.86□□□□□ -1.95
HERVK_113P62684 RPS20P10-201ENST00000451209 253 ntBASIC2.86□□□□□ -1.95
HERVK_113P62684 AC016925.1-201ENST00000458303 298 ntBASIC2.86□□□□□ -1.95
HERVK_113P62684 RNU6-221P-201ENST00000459541 99 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms