Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 U2.12-201ENST00000613778 191 ntBASIC2.59□□□□□ -1.99
PER3P56645 U2.20-201ENST00000613956 192 ntBASIC2.59□□□□□ -1.99
PER3P56645 U2.9-201ENST00000615427 191 ntBASIC2.59□□□□□ -1.99
PER3P56645 U2.11-201ENST00000616345 191 ntBASIC2.59□□□□□ -1.99
PER3P56645 U2.2-201ENST00000616535 191 ntBASIC2.59□□□□□ -1.99
PER3P56645 U2.3-201ENST00000617785 191 ntBASIC2.59□□□□□ -1.99
PER3P56645 U2.19-201ENST00000618602 191 ntBASIC2.59□□□□□ -1.99
PER3P56645 RNU2-1-201ENST00000618664 191 ntBASIC2.59□□□□□ -1.99
PER3P56645 AL590808.1-201ENST00000618696 141 ntBASIC2.59□□□□□ -1.99
PER3P56645 U2.6-201ENST00000619225 191 ntBASIC2.59□□□□□ -1.99
PER3P56645 U2.5-201ENST00000619465 191 ntBASIC2.59□□□□□ -1.99
PER3P56645 U2.10-201ENST00000620268 191 ntBASIC2.59□□□□□ -1.99
PER3P56645 VTRNA1-1-201ENST00000363120 99 ntBASIC2.58□□□□□ -2
PER3P56645 SNORA25.6-201ENST00000364121 118 ntBASIC2.58□□□□□ -2
PER3P56645 SNORD114-6-201ENST00000364393 72 ntBASIC2.58□□□□□ -2
PER3P56645 RNU6-1240P-201ENST00000365155 104 ntBASIC2.58□□□□□ -2
PER3P56645 Y_RNA.341-201ENST00000365341 102 ntBASIC2.58□□□□□ -2
PER3P56645 MIR9-1-201ENST00000385198 89 ntBASIC2.58□□□□□ -2
PER3P56645 RNU6-855P-201ENST00000410395 104 ntBASIC2.58□□□□□ -2
PER3P56645 HMGN2P35-201ENST00000412164 270 ntBASIC2.58□□□□□ -2
PER3P56645 SRIP3-201ENST00000413200 219 ntBASIC2.58□□□□□ -2
PER3P56645 AC009310.1-201ENST00000414414 451 ntBASIC2.58□□□□□ -2
PER3P56645 AC060773.1-201ENST00000421698 310 ntBASIC2.58□□□□□ -2
PER3P56645 AL513328.1-201ENST00000446460 224 ntBASIC2.58□□□□□ -2
PER3P56645 RNY3P16-201ENST00000516338 101 ntBASIC2.58□□□□□ -2
PER3P56645 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.58□□□□□ -2
PER3P56645 AC004792.1-201ENST00000614523 137 ntBASIC2.58□□□□□ -2
PER3P56645 AL078604.3-201ENST00000615580 211 ntBASIC2.58□□□□□ -2
PER3P56645 AL159152.1-201ENST00000635019 2587 ntBASIC2.58□□□□□ -2
PER3P56645 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.58□□□□□ -2
PER3P56645 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.57□□□□□ -2
PER3P56645 Y_RNA.29-201ENST00000362570 113 ntBASIC2.57□□□□□ -2
PER3P56645 SNORA72.4-201ENST00000384174 132 ntBASIC2.57□□□□□ -2
PER3P56645 Y_RNA.456-201ENST00000384232 111 ntBASIC2.57□□□□□ -2
PER3P56645 SNORD116-13-201ENST00000384408 92 ntBASIC2.57□□□□□ -2
PER3P56645 AC008134.1-201ENST00000420943 193 ntBASIC2.57□□□□□ -2
PER3P56645 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.57□□□□□ -2
PER3P56645 CR769767.1-201ENST00000436337 346 ntBASIC2.57□□□□□ -2
PER3P56645 Y_RNA.644-201ENST00000459006 113 ntBASIC2.57□□□□□ -2
PER3P56645 RPS26P55-201ENST00000471178 356 ntBASIC2.57□□□□□ -2
PER3P56645 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.57□□□□□ -2
PER3P56645 SNORA4.4-201ENST00000515921 135 ntBASIC2.57□□□□□ -2
PER3P56645 SNORA70.12-201ENST00000516084 153 ntBASIC2.57□□□□□ -2
PER3P56645 Y_RNA.674-201ENST00000516362 113 ntBASIC2.57□□□□□ -2
PER3P56645 RNU6-1337P-201ENST00000516525 95 ntBASIC2.57□□□□□ -2
PER3P56645 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.57□□□□□ -2
PER3P56645 AL449363.1-201ENST00000617815 186 ntBASIC2.57□□□□□ -2
PER3P56645 AL365265.1-201ENST00000621045 234 ntBASIC2.57□□□□□ -2
PER3P56645 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PER3P56645 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PER3P56645 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
PER3P56645 AC134026.1-201ENST00000623249 2239 ntBASIC2.56□□□□□ -2
PER3P56645 RNU6-653P-201ENST00000363074 106 ntBASIC2.56□□□□□ -2
PER3P56645 RNU6-407P-201ENST00000365280 104 ntBASIC2.56□□□□□ -2
PER3P56645 RNU6-47P-201ENST00000383866 107 ntBASIC2.56□□□□□ -2
PER3P56645 HSPE1P13-201ENST00000451143 297 ntBASIC2.56□□□□□ -2
PER3P56645 RNU7-26P-201ENST00000458980 63 ntBASIC2.56□□□□□ -2
PER3P56645 AC008413.1-201ENST00000511864 177 ntBASIC2.56□□□□□ -2
PER3P56645 RNA5SP20-201ENST00000515976 84 ntBASIC2.56□□□□□ -2
PER3P56645 AC024405.2-202ENST00000532731 184 ntBASIC2.56□□□□□ -2
PER3P56645 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PER3P56645 Y_RNA.99-201ENST00000363138 105 ntBASIC2.55□□□□□ -2
PER3P56645 Y_RNA.304-201ENST00000365011 112 ntBASIC2.55□□□□□ -2
PER3P56645 MIR504-201ENST00000385065 83 ntBASIC2.55□□□□□ -2
PER3P56645 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
PER3P56645 AC108938.1-201ENST00000451204 136 ntBASIC2.55□□□□□ -2
PER3P56645 RPS20P10-201ENST00000451209 253 ntBASIC2.55□□□□□ -2
PER3P56645 AL138752.1-201ENST00000452964 351 ntBASIC2.55□□□□□ -2
PER3P56645 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.55□□□□□ -2
PER3P56645 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.55□□□□□ -2
PER3P56645 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.55□□□□□ -2
PER3P56645 RNU6-182P-201ENST00000516970 105 ntBASIC2.55□□□□□ -2
PER3P56645 AC022202.1-201ENST00000613515 211 ntBASIC2.55□□□□□ -2
PER3P56645 AC013791.1-201ENST00000616619 62 ntBASIC2.55□□□□□ -2
PER3P56645 MIR7843-201ENST00000622274 79 ntBASIC2.55□□□□□ -2
PER3P56645 AC006435.5-201ENST00000624486 112 ntBASIC2.55□□□□□ -2
PER3P56645 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
PER3P56645 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
PER3P56645 AL356292.1-201ENST00000283110 373 ntBASIC2.54□□□□□ -2
PER3P56645 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
PER3P56645 RNU6-271P-201ENST00000363858 105 ntBASIC2.54□□□□□ -2
PER3P56645 Y_RNA.287-201ENST00000364853 94 ntBASIC2.54□□□□□ -2
PER3P56645 RNU6-117P-201ENST00000365415 107 ntBASIC2.54□□□□□ -2
PER3P56645 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.54□□□□□ -2
PER3P56645 PIGPP3-201ENST00000425307 415 ntBASIC2.54□□□□□ -2
PER3P56645 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.54□□□□□ -2
PER3P56645 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.54□□□□□ -2
PER3P56645 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.54□□□□□ -2
PER3P56645 AC107393.1-201ENST00000512403 346 ntBASIC2.54□□□□□ -2
PER3P56645 AC096725.1-201ENST00000514266 313 ntBASIC2.54□□□□□ -2
PER3P56645 RNA5SP24-201ENST00000516478 95 ntBASIC2.54□□□□□ -2
PER3P56645 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.54□□□□□ -2
PER3P56645 CYCSP26-201ENST00000534107 320 ntBASIC2.54□□□□□ -2
PER3P56645 AC004832.4-201ENST00000608952 331 ntBASIC2.54□□□□□ -2
PER3P56645 AC098479.1-201ENST00000609225 154 ntBASIC2.54□□□□□ -2
PER3P56645 FTX_2.1-201ENST00000618816 94 ntBASIC2.54□□□□□ -2
PER3P56645 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.54□□□□□ -2
PER3P56645 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.54□□□□□ -2
PER3P56645 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
PER3P56645 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms