Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 SNORD31B-201ENST00000364977 69 ntBASIC2.22□□□□□ -2.05
PMS2P54278 RNU6-326P-201ENST00000365480 107 ntBASIC2.22□□□□□ -2.05
PMS2P54278 Y_RNA.476-201ENST00000384347 108 ntBASIC2.22□□□□□ -2.05
PMS2P54278 Y_RNA.478-201ENST00000384358 107 ntBASIC2.22□□□□□ -2.05
PMS2P54278 SNORD58.1-201ENST00000391313 66 ntBASIC2.22□□□□□ -2.05
PMS2P54278 MIR1283-1-201ENST00000408494 87 ntBASIC2.22□□□□□ -2.05
PMS2P54278 RNU2-54P-201ENST00000410299 190 ntBASIC2.22□□□□□ -2.05
PMS2P54278 Y_RNA.602-201ENST00000410535 92 ntBASIC2.22□□□□□ -2.05
PMS2P54278 RNA5SP475-201ENST00000410568 110 ntBASIC2.22□□□□□ -2.05
PMS2P54278 RNU2-40P-201ENST00000410833 196 ntBASIC2.22□□□□□ -2.05
PMS2P54278 RNU2-38P-201ENST00000410856 79 ntBASIC2.22□□□□□ -2.05
PMS2P54278 TOMM22P2-201ENST00000430735 237 ntBASIC2.22□□□□□ -2.05
PMS2P54278 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.22□□□□□ -2.05
PMS2P54278 RPL39P38-201ENST00000467018 153 ntBASIC2.22□□□□□ -2.05
PMS2P54278 MIR449C-201ENST00000516047 92 ntBASIC2.22□□□□□ -2.05
PMS2P54278 RNU6-1023P-201ENST00000516137 106 ntBASIC2.22□□□□□ -2.05
PMS2P54278 RNU7-110P-201ENST00000516891 62 ntBASIC2.22□□□□□ -2.05
PMS2P54278 RNU6-794P-201ENST00000517261 64 ntBASIC2.22□□□□□ -2.05
PMS2P54278 AC012433.1-201ENST00000588916 398 ntBASIC2.22□□□□□ -2.05
PMS2P54278 AC078899.2-201ENST00000595282 212 ntBASIC2.22□□□□□ -2.05
PMS2P54278 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.22□□□□□ -2.05
PMS2P54278 AC022202.1-201ENST00000613515 211 ntBASIC2.22□□□□□ -2.05
PMS2P54278 SDR42E1P4-201ENST00000620894 481 ntBASIC2.22□□□□□ -2.05
PMS2P54278 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
PMS2P54278 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.21□□□□□ -2.06
PMS2P54278 MTND5P6-201ENST00000422338 1798 ntBASIC2.21□□□□□ -2.06
PMS2P54278 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
PMS2P54278 Y_RNA.99-201ENST00000363138 105 ntBASIC2.21□□□□□ -2.06
PMS2P54278 Y_RNA.136-201ENST00000363444 102 ntBASIC2.21□□□□□ -2.06
PMS2P54278 RNU6-379P-201ENST00000363813 104 ntBASIC2.21□□□□□ -2.06
PMS2P54278 RNU6-454P-201ENST00000364292 107 ntBASIC2.21□□□□□ -2.06
PMS2P54278 Y_RNA.489-201ENST00000384410 101 ntBASIC2.21□□□□□ -2.06
PMS2P54278 RNU6-21P-201ENST00000384710 107 ntBASIC2.21□□□□□ -2.06
PMS2P54278 MIR221-201ENST00000385135 110 ntBASIC2.21□□□□□ -2.06
PMS2P54278 MIR548B-201ENST00000385247 97 ntBASIC2.21□□□□□ -2.06
PMS2P54278 SNORA48.3-201ENST00000391081 134 ntBASIC2.21□□□□□ -2.06
PMS2P54278 AL356379.1-201ENST00000414105 126 ntBASIC2.21□□□□□ -2.06
PMS2P54278 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.21□□□□□ -2.06
PMS2P54278 AC108059.2-201ENST00000434626 151 ntBASIC2.21□□□□□ -2.06
PMS2P54278 AC005042.3-201ENST00000453230 174 ntBASIC2.21□□□□□ -2.06
PMS2P54278 AC016925.1-201ENST00000458303 298 ntBASIC2.21□□□□□ -2.06
PMS2P54278 RNU7-14P-201ENST00000459331 62 ntBASIC2.21□□□□□ -2.06
PMS2P54278 HMGN2P9-201ENST00000476875 229 ntBASIC2.21□□□□□ -2.06
PMS2P54278 HMGB3P17-201ENST00000504195 649 ntBASIC2.21□□□□□ -2.06
PMS2P54278 AC093259.1-201ENST00000509755 300 ntBASIC2.21□□□□□ -2.06
PMS2P54278 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.21□□□□□ -2.06
PMS2P54278 Y_RNA.680-201ENST00000516441 93 ntBASIC2.21□□□□□ -2.06
PMS2P54278 RNA5SP490-201ENST00000517141 136 ntBASIC2.21□□□□□ -2.06
PMS2P54278 RNU2-12P-201ENST00000517216 168 ntBASIC2.21□□□□□ -2.06
PMS2P54278 SNORA31.25-201ENST00000517242 134 ntBASIC2.21□□□□□ -2.06
PMS2P54278 DEFB108E-201ENST00000524692 240 ntBASIC2.21□□□□□ -2.06
PMS2P54278 MIR4529-201ENST00000578110 78 ntBASIC2.21□□□□□ -2.06
PMS2P54278 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.21□□□□□ -2.06
PMS2P54278 AC091932.3-201ENST00000624223 323 ntBASIC2.21□□□□□ -2.06
PMS2P54278 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
PMS2P54278 AC009487.4-201ENST00000624969 3585 ntBASIC2.21□□□□□ -2.06
PMS2P54278 Y_RNA.16-201ENST00000362421 102 ntBASIC2.2□□□□□ -2.06
PMS2P54278 Y_RNA.20-201ENST00000362479 113 ntBASIC2.2□□□□□ -2.06
PMS2P54278 Y_RNA.352-201ENST00000365439 102 ntBASIC2.2□□□□□ -2.06
PMS2P54278 Y_RNA.446-201ENST00000384178 104 ntBASIC2.2□□□□□ -2.06
PMS2P54278 SNORD14D-201ENST00000384390 87 ntBASIC2.2□□□□□ -2.06
PMS2P54278 HMGN2P39-201ENST00000398005 273 ntBASIC2.2□□□□□ -2.06
PMS2P54278 MIR1289-2-201ENST00000408360 111 ntBASIC2.2□□□□□ -2.06
PMS2P54278 RNU4-30P-201ENST00000410245 143 ntBASIC2.2□□□□□ -2.06
PMS2P54278 RNU6-847P-201ENST00000411115 108 ntBASIC2.2□□□□□ -2.06
PMS2P54278 AC108210.2-201ENST00000503681 201 ntBASIC2.2□□□□□ -2.06
PMS2P54278 ATP5EP1-201ENST00000510257 156 ntBASIC2.2□□□□□ -2.06
PMS2P54278 SERF1AP1-201ENST00000514575 187 ntBASIC2.2□□□□□ -2.06
PMS2P54278 RNU6-991P-201ENST00000516168 107 ntBASIC2.2□□□□□ -2.06
PMS2P54278 RNA5SP200-201ENST00000516360 103 ntBASIC2.2□□□□□ -2.06
PMS2P54278 RNU6-966P-201ENST00000516479 104 ntBASIC2.2□□□□□ -2.06
PMS2P54278 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.2□□□□□ -2.06
PMS2P54278 AC008749.1-201ENST00000597650 306 ntBASIC2.2□□□□□ -2.06
PMS2P54278 AL109918.3-201ENST00000603072 338 ntBASIC2.2□□□□□ -2.06
PMS2P54278 MIR6873-201ENST00000622788 63 ntBASIC2.2□□□□□ -2.06
PMS2P54278 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
PMS2P54278 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PMS2P54278 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
PMS2P54278 AC131280.1-202ENST00000624067 4211 ntBASIC2.2□□□□□ -2.06
PMS2P54278 AC092881.1-201ENST00000638218 2733 ntBASIC2.19□□□□□ -2.06
PMS2P54278 RNU6-545P-201ENST00000362681 104 ntBASIC2.19□□□□□ -2.06
PMS2P54278 SNORD114-1-201ENST00000362705 72 ntBASIC2.19□□□□□ -2.06
PMS2P54278 RNU6-1305P-201ENST00000364353 104 ntBASIC2.19□□□□□ -2.06
PMS2P54278 Y_RNA.243-201ENST00000364481 109 ntBASIC2.19□□□□□ -2.06
PMS2P54278 SNORA72.2-201ENST00000365028 127 ntBASIC2.19□□□□□ -2.06
PMS2P54278 Y_RNA.331-201ENST00000365267 102 ntBASIC2.19□□□□□ -2.06
PMS2P54278 Y_RNA.416-201ENST00000384014 113 ntBASIC2.19□□□□□ -2.06
PMS2P54278 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PMS2P54278 MIR1262-201ENST00000408276 93 ntBASIC2.19□□□□□ -2.06
PMS2P54278 MIR1185-2-201ENST00000408687 86 ntBASIC2.19□□□□□ -2.06
PMS2P54278 MIR548H3-201ENST00000408771 118 ntBASIC2.19□□□□□ -2.06
PMS2P54278 HMGN2P18-201ENST00000450680 270 ntBASIC2.19□□□□□ -2.06
PMS2P54278 RNU2-31P-201ENST00000516954 155 ntBASIC2.19□□□□□ -2.06
PMS2P54278 RNU1-117P-201ENST00000517041 158 ntBASIC2.19□□□□□ -2.06
PMS2P54278 MIR3128-201ENST00000581957 66 ntBASIC2.19□□□□□ -2.06
PMS2P54278 AC005828.6-201ENST00000606610 232 ntBASIC2.19□□□□□ -2.06
PMS2P54278 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.19□□□□□ -2.06
PMS2P54278 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
PMS2P54278 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.19□□□□□ -2.06
PMS2P54278 Y_RNA.361-201ENST00000365515 120 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 203 ms