Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RNU6-221P-201ENST00000459541 99 ntBASIC2.38□□□□□ -2.03
COPAP53621 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.38□□□□□ -2.03
COPAP53621 Y_RNA.668-201ENST00000516233 93 ntBASIC2.38□□□□□ -2.03
COPAP53621 AC067747.1-201ENST00000608026 250 ntBASIC2.38□□□□□ -2.03
COPAP53621 AC062037.2-201ENST00000610137 73 ntBASIC2.38□□□□□ -2.03
COPAP53621 AL590240.4-201ENST00000616908 390 ntBASIC2.38□□□□□ -2.03
COPAP53621 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
COPAP53621 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
COPAP53621 AL159152.1-201ENST00000635019 2587 ntBASIC2.37□□□□□ -2.03
COPAP53621 MIR21-201ENST00000362134 72 ntBASIC2.37□□□□□ -2.03
COPAP53621 RNU6-23P-201ENST00000363283 107 ntBASIC2.37□□□□□ -2.03
COPAP53621 RNU6-1164P-201ENST00000364428 107 ntBASIC2.37□□□□□ -2.03
COPAP53621 SNORA16B-201ENST00000364674 135 ntBASIC2.37□□□□□ -2.03
COPAP53621 Y_RNA.286-201ENST00000364813 102 ntBASIC2.37□□□□□ -2.03
COPAP53621 RNU6-505P-201ENST00000384427 107 ntBASIC2.37□□□□□ -2.03
COPAP53621 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
COPAP53621 Y_RNA.618-201ENST00000410949 107 ntBASIC2.37□□□□□ -2.03
COPAP53621 AL356379.1-201ENST00000414105 126 ntBASIC2.37□□□□□ -2.03
COPAP53621 AC008134.1-201ENST00000420943 193 ntBASIC2.37□□□□□ -2.03
COPAP53621 RPL23AP3-201ENST00000453844 468 ntBASIC2.37□□□□□ -2.03
COPAP53621 RNU6-856P-201ENST00000516959 98 ntBASIC2.37□□□□□ -2.03
COPAP53621 RNU2-12P-201ENST00000517216 168 ntBASIC2.37□□□□□ -2.03
COPAP53621 DEFB108E-201ENST00000524692 240 ntBASIC2.37□□□□□ -2.03
COPAP53621 MIR1273D-201ENST00000577266 86 ntBASIC2.37□□□□□ -2.03
COPAP53621 MIR4287-201ENST00000579398 78 ntBASIC2.37□□□□□ -2.03
COPAP53621 AC008749.1-201ENST00000597650 306 ntBASIC2.37□□□□□ -2.03
COPAP53621 AC010615.1-201ENST00000594254 1764 ntBASIC2.36□□□□□ -2.03
COPAP53621 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.36□□□□□ -2.03
COPAP53621 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COPAP53621 RNU6-324P-201ENST00000363957 106 ntBASIC2.36□□□□□ -2.03
COPAP53621 Y_RNA.569-201ENST00000384749 103 ntBASIC2.36□□□□□ -2.03
COPAP53621 AL512604.1-201ENST00000404812 257 ntBASIC2.36□□□□□ -2.03
COPAP53621 SUMO1P2-201ENST00000452524 304 ntBASIC2.36□□□□□ -2.03
COPAP53621 RNU1-131P-201ENST00000458943 161 ntBASIC2.36□□□□□ -2.03
COPAP53621 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COPAP53621 RNU6-1338P-201ENST00000516328 91 ntBASIC2.36□□□□□ -2.03
COPAP53621 IGKV3-31-201ENST00000523109 329 ntBASIC2.36□□□□□ -2.03
COPAP53621 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
COPAP53621 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
COPAP53621 AL391987.6-201ENST00000305671 199 ntBASIC2.35□□□□□ -2.03
COPAP53621 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
COPAP53621 MIRLET7G-201ENST00000362280 84 ntBASIC2.35□□□□□ -2.03
COPAP53621 RNU1-58P-201ENST00000362413 163 ntBASIC2.35□□□□□ -2.03
COPAP53621 RNA5SP432-201ENST00000362480 116 ntBASIC2.35□□□□□ -2.03
COPAP53621 RNA5SP493-201ENST00000364115 91 ntBASIC2.35□□□□□ -2.03
COPAP53621 Y_RNA.383-201ENST00000383855 97 ntBASIC2.35□□□□□ -2.03
COPAP53621 HMGN2P39-201ENST00000398005 273 ntBASIC2.35□□□□□ -2.03
COPAP53621 RNU6-1199P-201ENST00000411249 104 ntBASIC2.35□□□□□ -2.03
COPAP53621 BX510359.4-201ENST00000423750 193 ntBASIC2.35□□□□□ -2.03
COPAP53621 MTND4LP30-201ENST00000454092 297 ntBASIC2.35□□□□□ -2.03
COPAP53621 SNORD127-201ENST00000458892 86 ntBASIC2.35□□□□□ -2.03
COPAP53621 AC025647.1-201ENST00000517879 253 ntBASIC2.35□□□□□ -2.03
COPAP53621 AP005660.1-201ENST00000522972 293 ntBASIC2.35□□□□□ -2.03
COPAP53621 AP001282.2-201ENST00000616149 309 ntBASIC2.35□□□□□ -2.03
COPAP53621 AC127459.3-201ENST00000624328 466 ntBASIC2.35□□□□□ -2.03
COPAP53621 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.35□□□□□ -2.03
COPAP53621 Y_RNA.16-201ENST00000362421 102 ntBASIC2.34□□□□□ -2.03
COPAP53621 Y_RNA.237-201ENST00000364439 102 ntBASIC2.34□□□□□ -2.03
COPAP53621 RNU6-1240P-201ENST00000365155 104 ntBASIC2.34□□□□□ -2.03
COPAP53621 RNU6-514P-201ENST00000384208 107 ntBASIC2.34□□□□□ -2.03
COPAP53621 MIR518A2-201ENST00000384966 87 ntBASIC2.34□□□□□ -2.03
COPAP53621 MIR1253-201ENST00000408273 105 ntBASIC2.34□□□□□ -2.03
COPAP53621 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.34□□□□□ -2.03
COPAP53621 AC024067.1-201ENST00000426199 223 ntBASIC2.34□□□□□ -2.03
COPAP53621 RNU6-1132P-201ENST00000459214 107 ntBASIC2.34□□□□□ -2.03
COPAP53621 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.34□□□□□ -2.03
COPAP53621 RNU2-31P-201ENST00000516954 155 ntBASIC2.34□□□□□ -2.03
COPAP53621 SCARNA24.2-201ENST00000516968 130 ntBASIC2.34□□□□□ -2.03
COPAP53621 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.34□□□□□ -2.03
COPAP53621 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.34□□□□□ -2.03
COPAP53621 MIR5007-201ENST00000583098 95 ntBASIC2.34□□□□□ -2.03
COPAP53621 U6.115-201ENST00000636045 103 ntBASIC2.34□□□□□ -2.03
COPAP53621 ZNF720P1-201ENST00000562403 1939 ntBASIC2.34□□□□□ -2.04
COPAP53621 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.33□□□□□ -2.04
COPAP53621 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.33□□□□□ -2.04
COPAP53621 MIR335-201ENST00000362173 94 ntBASIC2.33□□□□□ -2.04
COPAP53621 SNORA25.1-201ENST00000362326 128 ntBASIC2.33□□□□□ -2.04
COPAP53621 SNORD115-30-201ENST00000364117 82 ntBASIC2.33□□□□□ -2.04
COPAP53621 Y_RNA.243-201ENST00000364481 109 ntBASIC2.33□□□□□ -2.04
COPAP53621 RNU6-326P-201ENST00000365480 107 ntBASIC2.33□□□□□ -2.04
COPAP53621 RNU11-3P-201ENST00000391111 133 ntBASIC2.33□□□□□ -2.04
COPAP53621 RNU2-38P-201ENST00000410856 79 ntBASIC2.33□□□□□ -2.04
COPAP53621 AC060773.1-201ENST00000421698 310 ntBASIC2.33□□□□□ -2.04
COPAP53621 AC018634.1-201ENST00000437554 401 ntBASIC2.33□□□□□ -2.04
COPAP53621 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.33□□□□□ -2.04
COPAP53621 RPL39P38-201ENST00000467018 153 ntBASIC2.33□□□□□ -2.04
COPAP53621 UBL5P3-201ENST00000475112 231 ntBASIC2.33□□□□□ -2.04
COPAP53621 RNU6-1041P-201ENST00000516254 102 ntBASIC2.33□□□□□ -2.04
COPAP53621 RNU6-966P-201ENST00000516479 104 ntBASIC2.33□□□□□ -2.04
COPAP53621 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.33□□□□□ -2.04
COPAP53621 AC023157.2-201ENST00000540596 141 ntBASIC2.33□□□□□ -2.04
COPAP53621 AC006006.1-201ENST00000603082 144 ntBASIC2.33□□□□□ -2.04
COPAP53621 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.33□□□□□ -2.04
COPAP53621 AL627230.6-201ENST00000611129 280 ntBASIC2.33□□□□□ -2.04
COPAP53621 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
COPAP53621 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
COPAP53621 Y_RNA.14-201ENST00000362415 103 ntBASIC2.32□□□□□ -2.04
COPAP53621 Y_RNA.518-201ENST00000384552 113 ntBASIC2.32□□□□□ -2.04
COPAP53621 AL031003.1-201ENST00000404229 172 ntBASIC2.32□□□□□ -2.04
COPAP53621 AC016909.1-201ENST00000415916 166 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 214.4 ms