Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 RNA5SP364-201ENST00000516938 78 ntBASIC1.8□□□□□ -2.12
LBX1P52954 SNORA31.24-201ENST00000517232 57 ntBASIC1.8□□□□□ -2.12
LBX1P52954 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LBX1P52954 MIR4419B-201ENST00000577260 68 ntBASIC1.8□□□□□ -2.12
LBX1P52954 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.8□□□□□ -2.12
LBX1P52954 AC007229.1-201ENST00000590455 412 ntBASIC1.8□□□□□ -2.12
LBX1P52954 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.8□□□□□ -2.12
LBX1P52954 AC008555.8-201ENST00000623602 2168 ntBASIC1.79□□□□□ -2.12
LBX1P52954 Y_RNA.138-201ENST00000363462 102 ntBASIC1.79□□□□□ -2.12
LBX1P52954 Y_RNA.179-201ENST00000363844 90 ntBASIC1.79□□□□□ -2.12
LBX1P52954 RNY3P11-201ENST00000364153 102 ntBASIC1.79□□□□□ -2.12
LBX1P52954 RNU6-474P-201ENST00000384243 107 ntBASIC1.79□□□□□ -2.12
LBX1P52954 RNU6-1026P-201ENST00000384465 108 ntBASIC1.79□□□□□ -2.12
LBX1P52954 AL117342.1-201ENST00000404861 406 ntBASIC1.79□□□□□ -2.12
LBX1P52954 UBE2V1P7-201ENST00000446395 340 ntBASIC1.79□□□□□ -2.12
LBX1P52954 RPL23AP7-203ENST00000449021 469 ntBASIC1.79□□□□□ -2.12
LBX1P52954 AC112492.4-201ENST00000456549 352 ntBASIC1.79□□□□□ -2.12
LBX1P52954 RNU6-221P-201ENST00000459541 99 ntBASIC1.79□□□□□ -2.12
LBX1P52954 RNU6-1170P-201ENST00000515974 106 ntBASIC1.79□□□□□ -2.12
LBX1P52954 RNU6-475P-201ENST00000516073 104 ntBASIC1.79□□□□□ -2.12
LBX1P52954 AP002001.1-203ENST00000534002 267 ntBASIC1.79□□□□□ -2.12
LBX1P52954 MIR4529-201ENST00000578110 78 ntBASIC1.79□□□□□ -2.12
LBX1P52954 AL096840.1-201ENST00000603287 93 ntBASIC1.79□□□□□ -2.12
LBX1P52954 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.79□□□□□ -2.12
LBX1P52954 AC090574.1-201ENST00000623186 233 ntBASIC1.79□□□□□ -2.12
LBX1P52954 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.79□□□□□ -2.12
LBX1P52954 AL359851.1-201ENST00000569460 4997 ntBASIC1.78□□□□□ -2.12
LBX1P52954 SNORD87-201ENST00000364849 89 ntBASIC1.78□□□□□ -2.12
LBX1P52954 Y_RNA.428-201ENST00000384078 102 ntBASIC1.78□□□□□ -2.12
LBX1P52954 MIR597-201ENST00000384968 97 ntBASIC1.78□□□□□ -2.12
LBX1P52954 MIR216A-201ENST00000385063 110 ntBASIC1.78□□□□□ -2.12
LBX1P52954 MIR548B-201ENST00000385247 97 ntBASIC1.78□□□□□ -2.12
LBX1P52954 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
LBX1P52954 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
LBX1P52954 AC096920.1-201ENST00000423991 241 ntBASIC1.78□□□□□ -2.12
LBX1P52954 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.78□□□□□ -2.12
LBX1P52954 COX6CP14-201ENST00000469580 174 ntBASIC1.78□□□□□ -2.12
LBX1P52954 AC074133.1-201ENST00000515696 183 ntBASIC1.78□□□□□ -2.12
LBX1P52954 RNU6-1012P-201ENST00000516606 109 ntBASIC1.78□□□□□ -2.12
LBX1P52954 SNORD116.3-201ENST00000517176 78 ntBASIC1.78□□□□□ -2.12
LBX1P52954 MIR3935-201ENST00000583472 104 ntBASIC1.78□□□□□ -2.12
LBX1P52954 AL627230.6-201ENST00000611129 280 ntBASIC1.78□□□□□ -2.12
LBX1P52954 U2.1-201ENST00000618978 145 ntBASIC1.78□□□□□ -2.12
LBX1P52954 AL078596.1-201ENST00000624856 447 ntBASIC1.78□□□□□ -2.12
LBX1P52954 AL606534.2-204ENST00000635008 178 ntBASIC1.78□□□□□ -2.12
LBX1P52954 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.78□□□□□ -2.12
LBX1P52954 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.78□□□□□ -2.13
LBX1P52954 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
LBX1P52954 MIR369-201ENST00000362155 70 ntBASIC1.77□□□□□ -2.13
LBX1P52954 Y_RNA.31-201ENST00000362574 102 ntBASIC1.77□□□□□ -2.13
LBX1P52954 Y_RNA.148-201ENST00000363557 117 ntBASIC1.77□□□□□ -2.13
LBX1P52954 Y_RNA.361-201ENST00000365515 120 ntBASIC1.77□□□□□ -2.13
LBX1P52954 MIR1185-2-201ENST00000408687 86 ntBASIC1.77□□□□□ -2.13
LBX1P52954 MCFD2P1-201ENST00000417812 300 ntBASIC1.77□□□□□ -2.13
LBX1P52954 MTND4P19-201ENST00000446659 478 ntBASIC1.77□□□□□ -2.13
LBX1P52954 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.77□□□□□ -2.13
LBX1P52954 AC114982.1-201ENST00000469402 321 ntBASIC1.77□□□□□ -2.13
LBX1P52954 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.77□□□□□ -2.13
LBX1P52954 SNORA40.14-201ENST00000516543 86 ntBASIC1.77□□□□□ -2.13
LBX1P52954 Y_RNA.711-201ENST00000516993 102 ntBASIC1.77□□□□□ -2.13
LBX1P52954 CYCSP23-201ENST00000519781 313 ntBASIC1.77□□□□□ -2.13
LBX1P52954 AC144568.1-201ENST00000520139 137 ntBASIC1.77□□□□□ -2.13
LBX1P52954 AC020661.2-201ENST00000560114 134 ntBASIC1.77□□□□□ -2.13
LBX1P52954 MIR4753-201ENST00000585119 83 ntBASIC1.77□□□□□ -2.13
LBX1P52954 VN1R91P-201ENST00000594377 169 ntBASIC1.77□□□□□ -2.13
LBX1P52954 AC008749.1-201ENST00000597650 306 ntBASIC1.77□□□□□ -2.13
LBX1P52954 AC090971.5-201ENST00000621102 293 ntBASIC1.77□□□□□ -2.13
LBX1P52954 AC091932.3-201ENST00000624223 323 ntBASIC1.77□□□□□ -2.13
LBX1P52954 Y_RNA.11-201ENST00000362375 109 ntBASIC1.76□□□□□ -2.13
LBX1P52954 Y_RNA.27-201ENST00000362540 103 ntBASIC1.76□□□□□ -2.13
LBX1P52954 RNA5SP276-201ENST00000362580 94 ntBASIC1.76□□□□□ -2.13
LBX1P52954 RNU6-727P-201ENST00000363592 107 ntBASIC1.76□□□□□ -2.13
LBX1P52954 RNU6-1305P-201ENST00000364353 104 ntBASIC1.76□□□□□ -2.13
LBX1P52954 Y_RNA.314-201ENST00000365114 102 ntBASIC1.76□□□□□ -2.13
LBX1P52954 RNU6-438P-201ENST00000365561 103 ntBASIC1.76□□□□□ -2.13
LBX1P52954 RNU6-1264P-201ENST00000383891 107 ntBASIC1.76□□□□□ -2.13
LBX1P52954 RNU6-418P-201ENST00000384035 107 ntBASIC1.76□□□□□ -2.13
LBX1P52954 SNORA48.1-201ENST00000390879 135 ntBASIC1.76□□□□□ -2.13
LBX1P52954 AL033519.2-201ENST00000403958 392 ntBASIC1.76□□□□□ -2.13
LBX1P52954 MRPL35P1-201ENST00000404272 572 ntBASIC1.76□□□□□ -2.13
LBX1P52954 AL512604.1-201ENST00000404812 257 ntBASIC1.76□□□□□ -2.13
LBX1P52954 SUMO2P12-201ENST00000405924 140 ntBASIC1.76□□□□□ -2.13
LBX1P52954 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.76□□□□□ -2.13
LBX1P52954 RN7SKP101-201ENST00000411376 320 ntBASIC1.76□□□□□ -2.13
LBX1P52954 AC060773.1-201ENST00000421698 310 ntBASIC1.76□□□□□ -2.13
LBX1P52954 TOMM22P2-201ENST00000430735 237 ntBASIC1.76□□□□□ -2.13
LBX1P52954 AC016717.1-201ENST00000448918 286 ntBASIC1.76□□□□□ -2.13
LBX1P52954 RNU7-87P-201ENST00000459343 62 ntBASIC1.76□□□□□ -2.13
LBX1P52954 SNORA40.9-201ENST00000515895 93 ntBASIC1.76□□□□□ -2.13
LBX1P52954 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.76□□□□□ -2.13
LBX1P52954 AC022868.1-201ENST00000517767 391 ntBASIC1.76□□□□□ -2.13
LBX1P52954 AC091144.1-201ENST00000519573 138 ntBASIC1.76□□□□□ -2.13
LBX1P52954 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.76□□□□□ -2.13
LBX1P52954 MIR5188-201ENST00000583467 113 ntBASIC1.76□□□□□ -2.13
LBX1P52954 AC092447.9-201ENST00000603395 144 ntBASIC1.76□□□□□ -2.13
LBX1P52954 uc_338.20-201ENST00000621563 178 ntBASIC1.76□□□□□ -2.13
LBX1P52954 snoZ196.1-201ENST00000625269 89 ntBASIC1.76□□□□□ -2.13
LBX1P52954 AC134503.1-201ENST00000633048 54 ntBASIC1.76□□□□□ -2.13
LBX1P52954 CENPCP1-201ENST00000533085 2578 ntBASIC1.76□□□□□ -2.13
LBX1P52954 RNU6-23P-201ENST00000363283 107 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms