Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AL049873.1-201ENST00000480540 376 ntBASIC3.44□□□□□ -1.86
USP11P51784 RPL36AP48-201ENST00000485521 314 ntBASIC3.44□□□□□ -1.86
USP11P51784 SNORA31.21-201ENST00000517180 77 ntBASIC3.44□□□□□ -1.86
USP11P51784 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.44□□□□□ -1.86
USP11P51784 MIR4506-201ENST00000584693 77 ntBASIC3.44□□□□□ -1.86
USP11P51784 RPL17P51-201ENST00000605218 238 ntBASIC3.44□□□□□ -1.86
USP11P51784 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
USP11P51784 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.44□□□□□ -1.86
USP11P51784 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
USP11P51784 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.43□□□□□ -1.86
USP11P51784 RPL21P3-201ENST00000395517 478 ntBASIC3.43□□□□□ -1.86
USP11P51784 SNORA79-201ENST00000408376 140 ntBASIC3.43□□□□□ -1.86
USP11P51784 RNA5SP274-201ENST00000410484 108 ntBASIC3.43□□□□□ -1.86
USP11P51784 RN7SKP123-201ENST00000410732 291 ntBASIC3.43□□□□□ -1.86
USP11P51784 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.43□□□□□ -1.86
USP11P51784 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.43□□□□□ -1.86
USP11P51784 MIR449C-201ENST00000516047 92 ntBASIC3.43□□□□□ -1.86
USP11P51784 RNU6-168P-201ENST00000516189 101 ntBASIC3.43□□□□□ -1.86
USP11P51784 RNA5SP341-201ENST00000516261 117 ntBASIC3.43□□□□□ -1.86
USP11P51784 RNU7-116P-201ENST00000516940 62 ntBASIC3.43□□□□□ -1.86
USP11P51784 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.43□□□□□ -1.86
USP11P51784 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.43□□□□□ -1.86
USP11P51784 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.43□□□□□ -1.86
USP11P51784 AC138915.1-201ENST00000565427 1685 ntBASIC3.43□□□□□ -1.86
USP11P51784 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.42□□□□□ -1.86
USP11P51784 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
USP11P51784 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
USP11P51784 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.42□□□□□ -1.86
USP11P51784 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.42□□□□□ -1.86
USP11P51784 Y_RNA.35-201ENST00000362601 101 ntBASIC3.42□□□□□ -1.86
USP11P51784 RNU4-41P-201ENST00000364426 143 ntBASIC3.42□□□□□ -1.86
USP11P51784 Y_RNA.309-201ENST00000365046 111 ntBASIC3.42□□□□□ -1.86
USP11P51784 MIR1283-1-201ENST00000408494 87 ntBASIC3.42□□□□□ -1.86
USP11P51784 RNA5SP511-201ENST00000410487 115 ntBASIC3.42□□□□□ -1.86
USP11P51784 RNU2-55P-201ENST00000411146 174 ntBASIC3.42□□□□□ -1.86
USP11P51784 AP001486.1-201ENST00000463339 476 ntBASIC3.42□□□□□ -1.86
USP11P51784 AC090515.1-201ENST00000465295 476 ntBASIC3.42□□□□□ -1.86
USP11P51784 AC010598.1-201ENST00000510378 103 ntBASIC3.42□□□□□ -1.86
USP11P51784 RNU6-1061P-201ENST00000516530 99 ntBASIC3.42□□□□□ -1.86
USP11P51784 RNU5F-4P-201ENST00000516581 114 ntBASIC3.42□□□□□ -1.86
USP11P51784 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.42□□□□□ -1.86
USP11P51784 AL049861.1-201ENST00000603130 150 ntBASIC3.42□□□□□ -1.86
USP11P51784 AL162274.2-201ENST00000614406 332 ntBASIC3.42□□□□□ -1.86
USP11P51784 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.42□□□□□ -1.86
USP11P51784 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.42□□□□□ -1.86
USP11P51784 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.41□□□□□ -1.86
USP11P51784 Y_RNA.432-201ENST00000384087 111 ntBASIC3.41□□□□□ -1.86
USP11P51784 SNORA46-201ENST00000384762 135 ntBASIC3.41□□□□□ -1.86
USP11P51784 MIR767-201ENST00000390228 109 ntBASIC3.41□□□□□ -1.86
USP11P51784 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.41□□□□□ -1.86
USP11P51784 SNORA72.7-201ENST00000516349 94 ntBASIC3.41□□□□□ -1.86
USP11P51784 AC027419.1-201ENST00000522976 328 ntBASIC3.41□□□□□ -1.86
USP11P51784 NDUFA5P6-201ENST00000542110 379 ntBASIC3.41□□□□□ -1.86
USP11P51784 AL160236.1-201ENST00000556317 195 ntBASIC3.41□□□□□ -1.86
USP11P51784 AC133485.4-201ENST00000561835 220 ntBASIC3.41□□□□□ -1.86
USP11P51784 AC138907.4-201ENST00000570107 226 ntBASIC3.41□□□□□ -1.86
USP11P51784 AL670379.3-201ENST00000605040 251 ntBASIC3.41□□□□□ -1.86
USP11P51784 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.41□□□□□ -1.86
USP11P51784 AC007318.2-201ENST00000620999 243 ntBASIC3.41□□□□□ -1.86
USP11P51784 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.41□□□□□ -1.86
USP11P51784 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.41□□□□□ -1.86
USP11P51784 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
USP11P51784 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
USP11P51784 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.41□□□□□ -1.86
USP11P51784 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
USP11P51784 AC093831.2-201ENST00000624393 3427 ntBASIC3.4□□□□□ -1.86
USP11P51784 Y_RNA.617-201ENST00000410920 90 ntBASIC3.4□□□□□ -1.87
USP11P51784 EIF4EP4-201ENST00000424916 578 ntBASIC3.4□□□□□ -1.87
USP11P51784 AC016717.1-201ENST00000448918 286 ntBASIC3.4□□□□□ -1.87
USP11P51784 RNU6-221P-201ENST00000459541 99 ntBASIC3.4□□□□□ -1.87
USP11P51784 RN7SL75P-201ENST00000461926 281 ntBASIC3.4□□□□□ -1.87
USP11P51784 AC010531.2-201ENST00000465012 153 ntBASIC3.4□□□□□ -1.87
USP11P51784 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.4□□□□□ -1.87
USP11P51784 RNA5SP20-201ENST00000515976 84 ntBASIC3.4□□□□□ -1.87
USP11P51784 RNU6-781P-201ENST00000516377 101 ntBASIC3.4□□□□□ -1.87
USP11P51784 SNORD59.2-201ENST00000516873 68 ntBASIC3.4□□□□□ -1.87
USP11P51784 AC015720.1-201ENST00000565251 277 ntBASIC3.4□□□□□ -1.87
USP11P51784 AC131055.1-201ENST00000584626 316 ntBASIC3.4□□□□□ -1.87
USP11P51784 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.4□□□□□ -1.87
USP11P51784 snoZ196.1-201ENST00000625269 89 ntBASIC3.4□□□□□ -1.87
USP11P51784 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.4□□□□□ -1.87
USP11P51784 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.4□□□□□ -1.87
USP11P51784 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP11P51784 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.39□□□□□ -1.87
USP11P51784 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP11P51784 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
USP11P51784 Y_RNA.91-201ENST00000363042 107 ntBASIC3.39□□□□□ -1.87
USP11P51784 RNU6-271P-201ENST00000363858 105 ntBASIC3.39□□□□□ -1.87
USP11P51784 RNU6-309P-201ENST00000364573 106 ntBASIC3.39□□□□□ -1.87
USP11P51784 SNORA14A-201ENST00000364773 135 ntBASIC3.39□□□□□ -1.87
USP11P51784 SNORD58C-201ENST00000365223 64 ntBASIC3.39□□□□□ -1.87
USP11P51784 RNU6-117P-201ENST00000365415 107 ntBASIC3.39□□□□□ -1.87
USP11P51784 SNORD116-21-201ENST00000384507 92 ntBASIC3.39□□□□□ -1.87
USP11P51784 RNA5SP354-201ENST00000391247 136 ntBASIC3.39□□□□□ -1.87
USP11P51784 AC104332.2-201ENST00000429959 156 ntBASIC3.39□□□□□ -1.87
USP11P51784 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.39□□□□□ -1.87
USP11P51784 RNU7-14P-201ENST00000459331 62 ntBASIC3.39□□□□□ -1.87
USP11P51784 RN7SKP43-201ENST00000516173 320 ntBASIC3.39□□□□□ -1.87
USP11P51784 RNU6-1299P-201ENST00000516316 100 ntBASIC3.39□□□□□ -1.87
USP11P51784 AL929325.1-201ENST00000603096 117 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms