Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 SNORD113-8-201ENST00000363497 74 ntBASIC1.92□□□□□ -2.1
CLK1P49759 RNU6-727P-201ENST00000363592 107 ntBASIC1.92□□□□□ -2.1
CLK1P49759 RNU6-379P-201ENST00000363813 104 ntBASIC1.92□□□□□ -2.1
CLK1P49759 Y_RNA.237-201ENST00000364439 102 ntBASIC1.92□□□□□ -2.1
CLK1P49759 Y_RNA.350-201ENST00000365409 98 ntBASIC1.92□□□□□ -2.1
CLK1P49759 RNU6-20P-201ENST00000384106 107 ntBASIC1.92□□□□□ -2.1
CLK1P49759 SNORA67.2-201ENST00000384300 149 ntBASIC1.92□□□□□ -2.1
CLK1P49759 Y_RNA.595-201ENST00000410403 105 ntBASIC1.92□□□□□ -2.1
CLK1P49759 Z98742.3-201ENST00000418637 326 ntBASIC1.92□□□□□ -2.1
CLK1P49759 AC004386.2-201ENST00000441858 148 ntBASIC1.92□□□□□ -2.1
CLK1P49759 RN7SL274P-201ENST00000492268 272 ntBASIC1.92□□□□□ -2.1
CLK1P49759 RPS23P5-201ENST00000495419 428 ntBASIC1.92□□□□□ -2.1
CLK1P49759 RNU6-970P-201ENST00000516312 107 ntBASIC1.92□□□□□ -2.1
CLK1P49759 RNU6-966P-201ENST00000516479 104 ntBASIC1.92□□□□□ -2.1
CLK1P49759 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.92□□□□□ -2.1
CLK1P49759 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.92□□□□□ -2.1
CLK1P49759 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.92□□□□□ -2.1
CLK1P49759 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.92□□□□□ -2.1
CLK1P49759 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.92□□□□□ -2.1
CLK1P49759 SNRPGP20-201ENST00000604477 205 ntBASIC1.92□□□□□ -2.1
CLK1P49759 TCL6_2.1-201ENST00000615162 119 ntBASIC1.92□□□□□ -2.1
CLK1P49759 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.91□□□□□ -2.1
CLK1P49759 WWP1P1-201ENST00000466609 2769 ntBASIC1.91□□□□□ -2.1
CLK1P49759 MIR335-201ENST00000362173 94 ntBASIC1.91□□□□□ -2.1
CLK1P49759 Y_RNA.60-201ENST00000362831 98 ntBASIC1.91□□□□□ -2.1
CLK1P49759 SNORD81.1-201ENST00000363064 77 ntBASIC1.91□□□□□ -2.1
CLK1P49759 RNU6-626P-201ENST00000363354 107 ntBASIC1.91□□□□□ -2.1
CLK1P49759 RNU5F-3P-201ENST00000363767 117 ntBASIC1.91□□□□□ -2.1
CLK1P49759 RNU6-1318P-201ENST00000365389 103 ntBASIC1.91□□□□□ -2.1
CLK1P49759 Y_RNA.415-201ENST00000384012 112 ntBASIC1.91□□□□□ -2.1
CLK1P49759 SNORA67.3-201ENST00000384366 140 ntBASIC1.91□□□□□ -2.1
CLK1P49759 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CLK1P49759 RNU6-907P-201ENST00000390924 102 ntBASIC1.91□□□□□ -2.1
CLK1P49759 Y_RNA.602-201ENST00000410535 92 ntBASIC1.91□□□□□ -2.1
CLK1P49759 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.91□□□□□ -2.1
CLK1P49759 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.91□□□□□ -2.1
CLK1P49759 AC108059.2-201ENST00000434626 151 ntBASIC1.91□□□□□ -2.1
CLK1P49759 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.91□□□□□ -2.1
CLK1P49759 AC009237.7-201ENST00000447357 229 ntBASIC1.91□□□□□ -2.1
CLK1P49759 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.91□□□□□ -2.1
CLK1P49759 AC074133.1-201ENST00000515696 183 ntBASIC1.91□□□□□ -2.1
CLK1P49759 RNU6-344P-201ENST00000516635 111 ntBASIC1.91□□□□□ -2.1
CLK1P49759 HSPE1P18-201ENST00000517602 280 ntBASIC1.91□□□□□ -2.1
CLK1P49759 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.91□□□□□ -2.1
CLK1P49759 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.91□□□□□ -2.1
CLK1P49759 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.91□□□□□ -2.1
CLK1P49759 AC018448.1-201ENST00000552843 316 ntBASIC1.91□□□□□ -2.1
CLK1P49759 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.91□□□□□ -2.1
CLK1P49759 MIR3128-201ENST00000581957 66 ntBASIC1.91□□□□□ -2.1
CLK1P49759 AC010900.2-201ENST00000604508 210 ntBASIC1.91□□□□□ -2.1
CLK1P49759 AC090425.1-201ENST00000610007 140 ntBASIC1.91□□□□□ -2.1
CLK1P49759 MIR1248-201ENST00000629190 106 ntBASIC1.91□□□□□ -2.1
CLK1P49759 ZNF355P-201ENST00000427301 3216 ntBASIC1.91□□□□□ -2.1
CLK1P49759 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.91□□□□□ -2.1
CLK1P49759 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CLK1P49759 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CLK1P49759 Y_RNA.476-201ENST00000384347 108 ntBASIC1.9□□□□□ -2.11
CLK1P49759 SNORA3.2-201ENST00000408221 125 ntBASIC1.9□□□□□ -2.11
CLK1P49759 RNU4-30P-201ENST00000410245 143 ntBASIC1.9□□□□□ -2.11
CLK1P49759 RAB28P5-201ENST00000427490 651 ntBASIC1.9□□□□□ -2.11
CLK1P49759 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CLK1P49759 UQCRBP2-201ENST00000447827 297 ntBASIC1.9□□□□□ -2.11
CLK1P49759 RNU6-625P-201ENST00000459412 107 ntBASIC1.9□□□□□ -2.11
CLK1P49759 RPL39P38-201ENST00000467018 153 ntBASIC1.9□□□□□ -2.11
CLK1P49759 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.9□□□□□ -2.11
CLK1P49759 RNU6-1338P-201ENST00000516328 91 ntBASIC1.9□□□□□ -2.11
CLK1P49759 CYCSP23-201ENST00000519781 313 ntBASIC1.9□□□□□ -2.11
CLK1P49759 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.9□□□□□ -2.11
CLK1P49759 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.9□□□□□ -2.11
CLK1P49759 U6.104-201ENST00000637979 90 ntBASIC1.9□□□□□ -2.11
CLK1P49759 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.9□□□□□ -2.11
CLK1P49759 MIR410-201ENST00000362222 80 ntBASIC1.89□□□□□ -2.11
CLK1P49759 Y_RNA.101-201ENST00000363154 102 ntBASIC1.89□□□□□ -2.11
CLK1P49759 Y_RNA.230-201ENST00000364348 109 ntBASIC1.89□□□□□ -2.11
CLK1P49759 RNU6-290P-201ENST00000365212 101 ntBASIC1.89□□□□□ -2.11
CLK1P49759 RNU6-1026P-201ENST00000384465 108 ntBASIC1.89□□□□□ -2.11
CLK1P49759 SUMO2P12-201ENST00000405924 140 ntBASIC1.89□□□□□ -2.11
CLK1P49759 RN7SKP223-201ENST00000410582 62 ntBASIC1.89□□□□□ -2.11
CLK1P49759 RNU5A-5P-201ENST00000411054 116 ntBASIC1.89□□□□□ -2.11
CLK1P49759 RNU6-1199P-201ENST00000411249 104 ntBASIC1.89□□□□□ -2.11
CLK1P49759 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.89□□□□□ -2.11
CLK1P49759 MTND4LP30-201ENST00000454092 297 ntBASIC1.89□□□□□ -2.11
CLK1P49759 HMGN2P23-201ENST00000456759 269 ntBASIC1.89□□□□□ -2.11
CLK1P49759 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.89□□□□□ -2.11
CLK1P49759 YWHAEP4-201ENST00000505390 198 ntBASIC1.89□□□□□ -2.11
CLK1P49759 RNU6-1023P-201ENST00000516137 106 ntBASIC1.89□□□□□ -2.11
CLK1P49759 RNU6-388P-201ENST00000517012 105 ntBASIC1.89□□□□□ -2.11
CLK1P49759 RNU6-389P-201ENST00000517048 105 ntBASIC1.89□□□□□ -2.11
CLK1P49759 RNU6-794P-201ENST00000517261 64 ntBASIC1.89□□□□□ -2.11
CLK1P49759 DEFB108E-201ENST00000524692 240 ntBASIC1.89□□□□□ -2.11
CLK1P49759 MIR5006-201ENST00000583027 110 ntBASIC1.89□□□□□ -2.11
CLK1P49759 AC005786.1-201ENST00000588553 154 ntBASIC1.89□□□□□ -2.11
CLK1P49759 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.89□□□□□ -2.11
CLK1P49759 AC008873.1-201ENST00000625051 138 ntBASIC1.89□□□□□ -2.11
CLK1P49759 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.89□□□□□ -2.11
CLK1P49759 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.89□□□□□ -2.11
CLK1P49759 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
CLK1P49759 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CLK1P49759 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
CLK1P49759 AL391987.6-201ENST00000305671 199 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms