Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
PRIM1P49642 AL356274.2-201ENST00000624379 3752 ntBASIC4.49□□□□□ -1.69
PRIM1P49642 TNPO1P3-201ENST00000436471 2662 ntBASIC4.49□□□□□ -1.69
PRIM1P49642 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.48□□□□□ -1.69
PRIM1P49642 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
PRIM1P49642 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRIM1P49642 RN7SKP111-201ENST00000410349 271 ntBASIC4.48□□□□□ -1.69
PRIM1P49642 AC016909.1-201ENST00000415916 166 ntBASIC4.48□□□□□ -1.69
PRIM1P49642 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.48□□□□□ -1.69
PRIM1P49642 RNU6-1146P-201ENST00000516282 102 ntBASIC4.48□□□□□ -1.69
PRIM1P49642 RNU6-586P-201ENST00000517265 104 ntBASIC4.48□□□□□ -1.69
PRIM1P49642 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PRIM1P49642 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PRIM1P49642 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRIM1P49642 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PRIM1P49642 Y_RNA.388-201ENST00000383919 113 ntBASIC4.47□□□□□ -1.69
PRIM1P49642 RNU6-1274P-201ENST00000384557 107 ntBASIC4.47□□□□□ -1.69
PRIM1P49642 Y_RNA.549-201ENST00000384657 102 ntBASIC4.47□□□□□ -1.69
PRIM1P49642 MIR1253-201ENST00000408273 105 ntBASIC4.47□□□□□ -1.69
PRIM1P49642 MRPS17P9-201ENST00000511924 393 ntBASIC4.47□□□□□ -1.69
PRIM1P49642 AC011406.1-201ENST00000512440 370 ntBASIC4.47□□□□□ -1.69
PRIM1P49642 SNORA4.4-201ENST00000515921 135 ntBASIC4.47□□□□□ -1.69
PRIM1P49642 RN7SKP83-201ENST00000516512 178 ntBASIC4.47□□□□□ -1.69
PRIM1P49642 RNU6-638P-201ENST00000516582 104 ntBASIC4.47□□□□□ -1.69
PRIM1P49642 RNU6-579P-201ENST00000516879 102 ntBASIC4.47□□□□□ -1.69
PRIM1P49642 AL033523.1-201ENST00000605153 153 ntBASIC4.47□□□□□ -1.69
PRIM1P49642 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC4.47□□□□□ -1.69
PRIM1P49642 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PRIM1P49642 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PRIM1P49642 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PRIM1P49642 AP001486.2-201ENST00000561652 5113 ntBASIC4.46□□□□□ -1.69
PRIM1P49642 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PRIM1P49642 SNORA63.5-201ENST00000363548 123 ntBASIC4.46□□□□□ -1.7
PRIM1P49642 RNU6-820P-201ENST00000384273 107 ntBASIC4.46□□□□□ -1.7
PRIM1P49642 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.46□□□□□ -1.7
PRIM1P49642 AC090115.4-201ENST00000609970 188 ntBASIC4.46□□□□□ -1.7
PRIM1P49642 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRIM1P49642 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PRIM1P49642 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PRIM1P49642 Y_RNA.366-201ENST00000365540 102 ntBASIC4.45□□□□□ -1.7
PRIM1P49642 SNORD61-201ENST00000384252 73 ntBASIC4.45□□□□□ -1.7
PRIM1P49642 RNU6-440P-201ENST00000390882 105 ntBASIC4.45□□□□□ -1.7
PRIM1P49642 Y_RNA.621-201ENST00000411065 96 ntBASIC4.45□□□□□ -1.7
PRIM1P49642 AL513477.1-202ENST00000417061 214 ntBASIC4.45□□□□□ -1.7
PRIM1P49642 RPS15AP28-201ENST00000435088 386 ntBASIC4.45□□□□□ -1.7
PRIM1P49642 SNRPGP13-201ENST00000442212 177 ntBASIC4.45□□□□□ -1.7
PRIM1P49642 AC096725.1-201ENST00000514266 313 ntBASIC4.45□□□□□ -1.7
PRIM1P49642 RNU6-1231P-201ENST00000517185 103 ntBASIC4.45□□□□□ -1.7
PRIM1P49642 AL358944.1-201ENST00000528537 144 ntBASIC4.45□□□□□ -1.7
PRIM1P49642 AL359075.3-201ENST00000613288 217 ntBASIC4.45□□□□□ -1.7
PRIM1P49642 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PRIM1P49642 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PRIM1P49642 RNU6-49P-201ENST00000384256 107 ntBASIC4.44□□□□□ -1.7
PRIM1P49642 SNORA31.1-201ENST00000515993 133 ntBASIC4.44□□□□□ -1.7
PRIM1P49642 SNORA31.5-201ENST00000516190 133 ntBASIC4.44□□□□□ -1.7
PRIM1P49642 RN7SKP209-201ENST00000516888 304 ntBASIC4.44□□□□□ -1.7
PRIM1P49642 RNU6-762P-201ENST00000517107 102 ntBASIC4.44□□□□□ -1.7
PRIM1P49642 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.44□□□□□ -1.7
PRIM1P49642 AL442128.1-201ENST00000615151 90 ntBASIC4.44□□□□□ -1.7
PRIM1P49642 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.44□□□□□ -1.7
PRIM1P49642 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PRIM1P49642 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.44□□□□□ -1.7
PRIM1P49642 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.44□□□□□ -1.7
PRIM1P49642 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRIM1P49642 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.43□□□□□ -1.7
PRIM1P49642 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.43□□□□□ -1.7
PRIM1P49642 RNU6-944P-201ENST00000364023 107 ntBASIC4.43□□□□□ -1.7
PRIM1P49642 Y_RNA.410-201ENST00000383992 113 ntBASIC4.43□□□□□ -1.7
PRIM1P49642 AL590004.2-201ENST00000404787 371 ntBASIC4.43□□□□□ -1.7
PRIM1P49642 SNRPGP10-201ENST00000432323 225 ntBASIC4.43□□□□□ -1.7
PRIM1P49642 RPS29P31-201ENST00000446147 164 ntBASIC4.43□□□□□ -1.7
PRIM1P49642 AC021205.2-201ENST00000480069 347 ntBASIC4.43□□□□□ -1.7
PRIM1P49642 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.43□□□□□ -1.7
PRIM1P49642 SCARNA15-202ENST00000516881 127 ntBASIC4.43□□□□□ -1.7
PRIM1P49642 MIR5009-201ENST00000578736 100 ntBASIC4.43□□□□□ -1.7
PRIM1P49642 AC008507.4-201ENST00000585464 127 ntBASIC4.43□□□□□ -1.7
PRIM1P49642 AC110741.2-201ENST00000605278 268 ntBASIC4.43□□□□□ -1.7
PRIM1P49642 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRIM1P49642 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
PRIM1P49642 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.43□□□□□ -1.7
PRIM1P49642 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRIM1P49642 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.43□□□□□ -1.7
PRIM1P49642 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
PRIM1P49642 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
PRIM1P49642 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
PRIM1P49642 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PRIM1P49642 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PRIM1P49642 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.42□□□□□ -1.7
PRIM1P49642 MIR422A-201ENST00000362286 90 ntBASIC4.42□□□□□ -1.7
PRIM1P49642 MIR181B1-201ENST00000385240 110 ntBASIC4.42□□□□□ -1.7
PRIM1P49642 RN7SL594P-201ENST00000470590 287 ntBASIC4.42□□□□□ -1.7
PRIM1P49642 NDUFA4P2-201ENST00000489989 244 ntBASIC4.42□□□□□ -1.7
PRIM1P49642 RNU6-693P-201ENST00000516134 107 ntBASIC4.42□□□□□ -1.7
PRIM1P49642 Y_RNA.685-201ENST00000516532 108 ntBASIC4.42□□□□□ -1.7
PRIM1P49642 RNU6-1270P-201ENST00000517128 108 ntBASIC4.42□□□□□ -1.7
PRIM1P49642 MIR4738-201ENST00000579134 87 ntBASIC4.42□□□□□ -1.7
PRIM1P49642 MIR4644-201ENST00000579929 84 ntBASIC4.42□□□□□ -1.7
PRIM1P49642 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.42□□□□□ -1.7
PRIM1P49642 MIR5197-201ENST00000583721 112 ntBASIC4.42□□□□□ -1.7
PRIM1P49642 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms