Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 SNORA44.1-201ENST00000517031 108 ntBASIC1.52□□□□□ -2.17
BRCC3P46736 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.52□□□□□ -2.17
BRCC3P46736 HSBP1P1-201ENST00000555205 166 ntBASIC1.52□□□□□ -2.17
BRCC3P46736 MIR5094-201ENST00000578766 85 ntBASIC1.52□□□□□ -2.17
BRCC3P46736 AC133104.2-201ENST00000615272 193 ntBASIC1.52□□□□□ -2.17
BRCC3P46736 AC011476.5-201ENST00000615594 130 ntBASIC1.52□□□□□ -2.17
BRCC3P46736 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.52□□□□□ -2.17
BRCC3P46736 snoZ196.1-201ENST00000625269 89 ntBASIC1.52□□□□□ -2.17
BRCC3P46736 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.52□□□□□ -2.17
BRCC3P46736 MIR338-201ENST00000636369 67 ntBASIC1.52□□□□□ -2.17
BRCC3P46736 Y_RNA.138-201ENST00000363462 102 ntBASIC1.51□□□□□ -2.17
BRCC3P46736 RNU6-112P-201ENST00000363599 104 ntBASIC1.51□□□□□ -2.17
BRCC3P46736 U3.8-201ENST00000363675 217 ntBASIC1.51□□□□□ -2.17
BRCC3P46736 RNU6-926P-201ENST00000384075 107 ntBASIC1.51□□□□□ -2.17
BRCC3P46736 MIR320A-201ENST00000385302 82 ntBASIC1.51□□□□□ -2.17
BRCC3P46736 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
BRCC3P46736 Y_RNA.605-201ENST00000410577 105 ntBASIC1.51□□□□□ -2.17
BRCC3P46736 AC245047.4-201ENST00000433189 144 ntBASIC1.51□□□□□ -2.17
BRCC3P46736 AL137792.2-201ENST00000443484 235 ntBASIC1.51□□□□□ -2.17
BRCC3P46736 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.51□□□□□ -2.17
BRCC3P46736 ATP5J2P3-201ENST00000451550 258 ntBASIC1.51□□□□□ -2.17
BRCC3P46736 PCNPP5-201ENST00000452246 481 ntBASIC1.51□□□□□ -2.17
BRCC3P46736 AC010409.1-201ENST00000487382 476 ntBASIC1.51□□□□□ -2.17
BRCC3P46736 AC010469.2-201ENST00000496412 480 ntBASIC1.51□□□□□ -2.17
BRCC3P46736 SNORA40.9-201ENST00000515895 93 ntBASIC1.51□□□□□ -2.17
BRCC3P46736 RNU6-107P-201ENST00000516643 102 ntBASIC1.51□□□□□ -2.17
BRCC3P46736 AC092447.9-201ENST00000603395 144 ntBASIC1.51□□□□□ -2.17
BRCC3P46736 AC007485.1-201ENST00000616755 206 ntBASIC1.51□□□□□ -2.17
BRCC3P46736 U2.1-201ENST00000618978 145 ntBASIC1.51□□□□□ -2.17
BRCC3P46736 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.51□□□□□ -2.17
BRCC3P46736 MIR4272-201ENST00000635924 64 ntBASIC1.51□□□□□ -2.17
BRCC3P46736 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.51□□□□□ -2.17
BRCC3P46736 U8.1-201ENST00000362843 134 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 RNU6-454P-201ENST00000364292 107 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 Y_RNA.252-201ENST00000364556 101 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 Y_RNA.327-201ENST00000365201 102 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 Y_RNA.395-201ENST00000383945 109 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 RNY1P14-201ENST00000384426 108 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 RNU6-296P-201ENST00000384608 107 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 RNU6-417P-201ENST00000384712 107 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 RNA5SP467-201ENST00000391274 118 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 MIR934-201ENST00000401241 83 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.5□□□□□ -2.17
BRCC3P46736 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.5□□□□□ -2.17
BRCC3P46736 NDUFB4P10-201ENST00000452541 359 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 RPL26P26-201ENST00000480251 434 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 RNU6-966P-201ENST00000516479 104 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 RNU7-4P-201ENST00000516961 62 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 SNORD116.3-201ENST00000517176 78 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 AC018448.1-201ENST00000552843 316 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 AL442163.3-201ENST00000554110 156 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.5□□□□□ -2.17
BRCC3P46736 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.5□□□□□ -2.17
BRCC3P46736 AL157834.3-201ENST00000615543 103 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 U6.108-201ENST00000637764 58 ntBASIC1.5□□□□□ -2.17
BRCC3P46736 RNU6-797P-201ENST00000363101 109 ntBASIC1.49□□□□□ -2.17
BRCC3P46736 Y_RNA.428-201ENST00000384078 102 ntBASIC1.49□□□□□ -2.17
BRCC3P46736 MIR30A-201ENST00000385092 71 ntBASIC1.49□□□□□ -2.17
BRCC3P46736 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
BRCC3P46736 AC022028.1-201ENST00000412054 408 ntBASIC1.49□□□□□ -2.17
BRCC3P46736 PMCHL1-202ENST00000423102 261 ntBASIC1.49□□□□□ -2.17
BRCC3P46736 AC099799.1-201ENST00000439809 192 ntBASIC1.49□□□□□ -2.17
BRCC3P46736 UQCRBP2-201ENST00000447827 297 ntBASIC1.49□□□□□ -2.17
BRCC3P46736 Y_RNA.639-201ENST00000458981 102 ntBASIC1.49□□□□□ -2.17
BRCC3P46736 AC114982.1-201ENST00000469402 321 ntBASIC1.49□□□□□ -2.17
BRCC3P46736 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.49□□□□□ -2.17
BRCC3P46736 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.49□□□□□ -2.17
BRCC3P46736 RNU6-408P-201ENST00000515910 100 ntBASIC1.49□□□□□ -2.17
BRCC3P46736 SNORA31.17-201ENST00000516953 127 ntBASIC1.49□□□□□ -2.17
BRCC3P46736 AC006600.1-201ENST00000572529 153 ntBASIC1.49□□□□□ -2.17
BRCC3P46736 MIR5188-201ENST00000583467 113 ntBASIC1.49□□□□□ -2.17
BRCC3P46736 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
BRCC3P46736 snoU2-30.2-201ENST00000362805 70 ntBASIC1.48□□□□□ -2.17
BRCC3P46736 RNU1-96P-201ENST00000364163 162 ntBASIC1.48□□□□□ -2.17
BRCC3P46736 AL355796.1-201ENST00000406706 323 ntBASIC1.48□□□□□ -2.17
BRCC3P46736 RN7SKP51-201ENST00000410781 304 ntBASIC1.48□□□□□ -2.17
BRCC3P46736 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.48□□□□□ -2.17
BRCC3P46736 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.48□□□□□ -2.17
BRCC3P46736 UBE2V1P7-201ENST00000446395 340 ntBASIC1.48□□□□□ -2.17
BRCC3P46736 SNORD65B-201ENST00000459126 73 ntBASIC1.48□□□□□ -2.17
BRCC3P46736 RNU6-1012P-201ENST00000516606 109 ntBASIC1.48□□□□□ -2.17
BRCC3P46736 AC144568.1-201ENST00000520139 137 ntBASIC1.48□□□□□ -2.17
BRCC3P46736 AC027419.1-201ENST00000522976 328 ntBASIC1.48□□□□□ -2.17
BRCC3P46736 AC069114.2-201ENST00000604699 304 ntBASIC1.48□□□□□ -2.17
BRCC3P46736 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.48□□□□□ -2.17
BRCC3P46736 AC006157.1-201ENST00000611750 366 ntBASIC1.48□□□□□ -2.17
BRCC3P46736 AL160413.1-201ENST00000622780 310 ntBASIC1.48□□□□□ -2.17
BRCC3P46736 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
BRCC3P46736 AC091812.1-201ENST00000432235 1948 ntBASIC1.48□□□□□ -2.17
BRCC3P46736 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.47□□□□□ -2.17
BRCC3P46736 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.47□□□□□ -2.17
BRCC3P46736 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
BRCC3P46736 Y_RNA.112-201ENST00000363250 102 ntBASIC1.47□□□□□ -2.17
BRCC3P46736 RNU6-1019P-201ENST00000364424 107 ntBASIC1.47□□□□□ -2.17
BRCC3P46736 RNU6-1240P-201ENST00000365155 104 ntBASIC1.47□□□□□ -2.17
BRCC3P46736 RNY3P4-201ENST00000384428 101 ntBASIC1.47□□□□□ -2.17
BRCC3P46736 Y_RNA.498-201ENST00000384460 102 ntBASIC1.47□□□□□ -2.17
BRCC3P46736 CST2P1-201ENST00000425770 87 ntBASIC1.47□□□□□ -2.17
BRCC3P46736 RAB28P5-201ENST00000427490 651 ntBASIC1.47□□□□□ -2.17
BRCC3P46736 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms