Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CHRNA4P43681 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHRNA4P43681 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHRNA4P43681 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CHRNA4P43681 RNU6-690P-201ENST00000365242 106 ntBASIC3.49□□□□□ -1.85
CHRNA4P43681 SNORD116-22-201ENST00000384430 92 ntBASIC3.49□□□□□ -1.85
CHRNA4P43681 SNORA12-201ENST00000391162 147 ntBASIC3.49□□□□□ -1.85
CHRNA4P43681 AL133475.1-201ENST00000404414 305 ntBASIC3.49□□□□□ -1.85
CHRNA4P43681 RNU6-402P-201ENST00000410678 103 ntBASIC3.49□□□□□ -1.85
CHRNA4P43681 VDAC1P3-201ENST00000434069 851 ntBASIC3.49□□□□□ -1.85
CHRNA4P43681 AL357552.1-201ENST00000445254 415 ntBASIC3.49□□□□□ -1.85
CHRNA4P43681 RNU6-162P-201ENST00000516228 103 ntBASIC3.49□□□□□ -1.85
CHRNA4P43681 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.49□□□□□ -1.85
CHRNA4P43681 XIST_intron.1-201ENST00000619444 68 ntBASIC3.49□□□□□ -1.85
CHRNA4P43681 MIR3199-2-201ENST00000636243 86 ntBASIC3.49□□□□□ -1.85
CHRNA4P43681 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.49□□□□□ -1.85
CHRNA4P43681 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHRNA4P43681 AC058791.1-201ENST00000608412 3198 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHRNA4P43681 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CHRNA4P43681 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CHRNA4P43681 MIR30E-201ENST00000362104 92 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 RNU4-35P-201ENST00000362588 141 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 RNA5SP119-201ENST00000362715 117 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 SNORA33-201ENST00000363664 130 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 RNU6-1210P-201ENST00000363775 107 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 RNU6-219P-201ENST00000364728 107 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 MIR548A2-201ENST00000384956 97 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 SNORD17-201ENST00000390930 237 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 RNU6-938P-201ENST00000411285 103 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.48□□□□□ -1.85
CHRNA4P43681 RBMY2UP-201ENST00000453474 324 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 RNU7-170P-201ENST00000459303 61 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 MRPS17P9-201ENST00000511924 393 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 SUMO2P16-201ENST00000519475 264 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 AC109329.2-201ENST00000519658 482 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 NDUFB9P3-201ENST00000521269 501 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC3.48□□□□□ -1.85
CHRNA4P43681 AC021443.1-201ENST00000604478 211 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 MIR376A2-201ENST00000636782 80 ntBASIC3.48□□□□□ -1.85
CHRNA4P43681 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.48□□□□□ -1.85
CHRNA4P43681 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.48□□□□□ -1.85
CHRNA4P43681 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.48□□□□□ -1.85
CHRNA4P43681 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHRNA4P43681 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.47□□□□□ -1.85
CHRNA4P43681 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHRNA4P43681 AC093908.1-201ENST00000623125 8092 ntBASIC3.47□□□□□ -1.85
CHRNA4P43681 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHRNA4P43681 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHRNA4P43681 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CHRNA4P43681 RNU6-349P-201ENST00000362402 107 ntBASIC3.47□□□□□ -1.85
CHRNA4P43681 RNU6-944P-201ENST00000364023 107 ntBASIC3.47□□□□□ -1.85
CHRNA4P43681 SNORA9-201ENST00000384215 133 ntBASIC3.47□□□□□ -1.85
CHRNA4P43681 SNORD14D-201ENST00000384390 87 ntBASIC3.47□□□□□ -1.85
CHRNA4P43681 MIR1283-1-201ENST00000408494 87 ntBASIC3.47□□□□□ -1.85
CHRNA4P43681 RPS29P4-201ENST00000414733 161 ntBASIC3.47□□□□□ -1.85
CHRNA4P43681 RN7SKP289-201ENST00000517244 295 ntBASIC3.47□□□□□ -1.85
CHRNA4P43681 AC011604.1-201ENST00000545978 196 ntBASIC3.47□□□□□ -1.85
CHRNA4P43681 AC012493.2-201ENST00000595083 291 ntBASIC3.47□□□□□ -1.85
CHRNA4P43681 AC007179.3-201ENST00000604976 235 ntBASIC3.47□□□□□ -1.85
CHRNA4P43681 RNVU1-4-201ENST00000612985 164 ntBASIC3.47□□□□□ -1.85
CHRNA4P43681 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.47□□□□□ -1.85
CHRNA4P43681 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CHRNA4P43681 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CHRNA4P43681 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHRNA4P43681 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.47□□□□□ -1.85
CHRNA4P43681 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CHRNA4P43681 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CHRNA4P43681 FAM35BP-202ENST00000497389 3337 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 FAM35CP-201ENST00000554755 2470 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CHRNA4P43681 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CHRNA4P43681 RNU6-170P-201ENST00000362832 104 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 RNU6-655P-201ENST00000362858 107 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 Y_RNA.426-201ENST00000384068 113 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 RNU6-1104P-201ENST00000384723 104 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 MIR491-201ENST00000384877 84 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CHRNA4P43681 MIR300-201ENST00000401138 83 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 ARF4P2-201ENST00000430209 526 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 HMGN2P31-201ENST00000432430 273 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 NDUFA4P2-201ENST00000489989 244 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 RNU6-267P-201ENST00000516714 103 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 SNORA70.19-201ENST00000516717 90 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 RNU6-1098P-201ENST00000516772 96 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 MIR2276-201ENST00000516886 89 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 SNORA70.24-201ENST00000517233 118 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 MIR5047-201ENST00000579212 100 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.46□□□□□ -1.86
CHRNA4P43681 AC091152.3-201ENST00000604227 325 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 AC012531.4-201ENST00000616509 177 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 AC012314.7-201ENST00000619693 93 ntBASIC3.46□□□□□ -1.86
CHRNA4P43681 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
CHRNA4P43681 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CHRNA4P43681 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CHRNA4P43681 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CHRNA4P43681 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHRNA4P43681 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.45□□□□□ -1.86
CHRNA4P43681 AC010680.1-201ENST00000590024 3590 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms