Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CLCN1P35523 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CLCN1P35523 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.1□□□□□ -1.75
CLCN1P35523 AC068647.1-201ENST00000489539 2265 ntBASIC4.1□□□□□ -1.75
CLCN1P35523 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CLCN1P35523 Y_RNA.267-201ENST00000364679 109 ntBASIC4.09□□□□□ -1.75
CLCN1P35523 SNORD24-201ENST00000383884 75 ntBASIC4.09□□□□□ -1.75
CLCN1P35523 MIR554-201ENST00000384874 96 ntBASIC4.09□□□□□ -1.75
CLCN1P35523 RNA5SP171-201ENST00000391071 115 ntBASIC4.09□□□□□ -1.75
CLCN1P35523 AL031121.1-201ENST00000406553 254 ntBASIC4.09□□□□□ -1.75
CLCN1P35523 RNU2-63P-201ENST00000410792 194 ntBASIC4.09□□□□□ -1.75
CLCN1P35523 RNA5SP236-201ENST00000516169 116 ntBASIC4.09□□□□□ -1.75
CLCN1P35523 Y_RNA.666-201ENST00000516187 112 ntBASIC4.09□□□□□ -1.75
CLCN1P35523 SCARNA14-201ENST00000516903 136 ntBASIC4.09□□□□□ -1.75
CLCN1P35523 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC4.09□□□□□ -1.75
CLCN1P35523 AC008507.4-201ENST00000585464 127 ntBASIC4.09□□□□□ -1.75
CLCN1P35523 AC022217.4-201ENST00000604389 163 ntBASIC4.09□□□□□ -1.75
CLCN1P35523 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.09□□□□□ -1.75
CLCN1P35523 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLCN1P35523 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.09□□□□□ -1.75
CLCN1P35523 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.09□□□□□ -1.75
CLCN1P35523 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CLCN1P35523 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.08□□□□□ -1.76
CLCN1P35523 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CLCN1P35523 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CLCN1P35523 Y_RNA.528-201ENST00000384575 108 ntBASIC4.08□□□□□ -1.76
CLCN1P35523 MIR591-201ENST00000385290 95 ntBASIC4.08□□□□□ -1.76
CLCN1P35523 SNORA11.1-201ENST00000408133 129 ntBASIC4.08□□□□□ -1.76
CLCN1P35523 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.08□□□□□ -1.76
CLCN1P35523 RNU6-693P-201ENST00000516134 107 ntBASIC4.08□□□□□ -1.76
CLCN1P35523 RNU6-412P-201ENST00000516434 106 ntBASIC4.08□□□□□ -1.76
CLCN1P35523 AC018630.2-201ENST00000534866 2403 ntBASIC4.08□□□□□ -1.76
CLCN1P35523 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.08□□□□□ -1.76
CLCN1P35523 AL356280.1-201ENST00000603614 379 ntBASIC4.08□□□□□ -1.76
CLCN1P35523 AL359075.3-201ENST00000613288 217 ntBASIC4.08□□□□□ -1.76
CLCN1P35523 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLCN1P35523 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.08□□□□□ -1.76
CLCN1P35523 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLCN1P35523 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CLCN1P35523 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
CLCN1P35523 RNU6-888P-201ENST00000363010 101 ntBASIC4.07□□□□□ -1.76
CLCN1P35523 RNA5SP97-201ENST00000365006 84 ntBASIC4.07□□□□□ -1.76
CLCN1P35523 AC007064.1-201ENST00000412238 351 ntBASIC4.07□□□□□ -1.76
CLCN1P35523 AC106707.2-201ENST00000484182 374 ntBASIC4.07□□□□□ -1.76
CLCN1P35523 RNU6-1149P-201ENST00000516810 97 ntBASIC4.07□□□□□ -1.76
CLCN1P35523 AC022695.1-201ENST00000522089 237 ntBASIC4.07□□□□□ -1.76
CLCN1P35523 AL606490.9-201ENST00000603331 271 ntBASIC4.07□□□□□ -1.76
CLCN1P35523 AL355297.2-201ENST00000604792 129 ntBASIC4.07□□□□□ -1.76
CLCN1P35523 MIR6079-201ENST00000635807 62 ntBASIC4.07□□□□□ -1.76
CLCN1P35523 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLCN1P35523 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLCN1P35523 Y_RNA.242-201ENST00000364473 110 ntBASIC4.06□□□□□ -1.76
CLCN1P35523 SNORA68.1-201ENST00000364537 132 ntBASIC4.06□□□□□ -1.76
CLCN1P35523 RNA5SP467-201ENST00000391274 118 ntBASIC4.06□□□□□ -1.76
CLCN1P35523 RN7SKP156-201ENST00000410308 342 ntBASIC4.06□□□□□ -1.76
CLCN1P35523 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.06□□□□□ -1.76
CLCN1P35523 RPS29P24-201ENST00000486345 171 ntBASIC4.06□□□□□ -1.76
CLCN1P35523 RNU6-1041P-201ENST00000516254 102 ntBASIC4.06□□□□□ -1.76
CLCN1P35523 Y_RNA.714-201ENST00000517065 90 ntBASIC4.06□□□□□ -1.76
CLCN1P35523 RNU7-128P-201ENST00000517247 62 ntBASIC4.06□□□□□ -1.76
CLCN1P35523 AC006130.2-201ENST00000586202 326 ntBASIC4.06□□□□□ -1.76
CLCN1P35523 SNORA62.6-201ENST00000606322 83 ntBASIC4.06□□□□□ -1.76
CLCN1P35523 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.06□□□□□ -1.76
CLCN1P35523 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CLCN1P35523 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLCN1P35523 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLCN1P35523 MIR126-201ENST00000362291 85 ntBASIC4.05□□□□□ -1.76
CLCN1P35523 RNA5SP125-201ENST00000364843 120 ntBASIC4.05□□□□□ -1.76
CLCN1P35523 RPL21P3-201ENST00000395517 478 ntBASIC4.05□□□□□ -1.76
CLCN1P35523 RNU2-48P-201ENST00000410694 191 ntBASIC4.05□□□□□ -1.76
CLCN1P35523 EDDM3CP-201ENST00000415977 425 ntBASIC4.05□□□□□ -1.76
CLCN1P35523 SNRPGP13-201ENST00000442212 177 ntBASIC4.05□□□□□ -1.76
CLCN1P35523 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.05□□□□□ -1.76
CLCN1P35523 RNA5SP385-201ENST00000515947 110 ntBASIC4.05□□□□□ -1.76
CLCN1P35523 RNU6-113P-201ENST00000516653 101 ntBASIC4.05□□□□□ -1.76
CLCN1P35523 RNU6-341P-201ENST00000516973 96 ntBASIC4.05□□□□□ -1.76
CLCN1P35523 RNU6-537P-201ENST00000517277 103 ntBASIC4.05□□□□□ -1.76
CLCN1P35523 MIR3158-1-201ENST00000583596 81 ntBASIC4.05□□□□□ -1.76
CLCN1P35523 MIR4506-201ENST00000584693 77 ntBASIC4.05□□□□□ -1.76
CLCN1P35523 SNORA51-201ENST00000606420 132 ntBASIC4.05□□□□□ -1.76
CLCN1P35523 MIR6875-201ENST00000617506 72 ntBASIC4.05□□□□□ -1.76
CLCN1P35523 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CLCN1P35523 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC4.04□□□□□ -1.76
CLCN1P35523 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLCN1P35523 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CLCN1P35523 MIR802-201ENST00000390235 94 ntBASIC4.04□□□□□ -1.76
CLCN1P35523 SNORA48.8-201ENST00000391324 134 ntBASIC4.04□□□□□ -1.76
CLCN1P35523 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.04□□□□□ -1.76
CLCN1P35523 RNU6ATAC40P-201ENST00000408580 137 ntBASIC4.04□□□□□ -1.76
CLCN1P35523 AL357552.1-201ENST00000445254 415 ntBASIC4.04□□□□□ -1.76
CLCN1P35523 RN7SL323P-201ENST00000494712 295 ntBASIC4.04□□□□□ -1.76
CLCN1P35523 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.04□□□□□ -1.76
CLCN1P35523 SCGB1D5P-201ENST00000515134 247 ntBASIC4.04□□□□□ -1.76
CLCN1P35523 SNORA67.7-201ENST00000516664 135 ntBASIC4.04□□□□□ -1.76
CLCN1P35523 RNU1-45P-201ENST00000517191 141 ntBASIC4.04□□□□□ -1.76
CLCN1P35523 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC4.04□□□□□ -1.76
CLCN1P35523 AC087685.1-201ENST00000587507 141 ntBASIC4.04□□□□□ -1.76
CLCN1P35523 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.04□□□□□ -1.76
CLCN1P35523 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CLCN1P35523 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms